Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORD41.1-201ENST00000391000 69 ntBASIC1.75□□□□□ -2.13
USP46P62068 SNORA40.6-201ENST00000391153 128 ntBASIC1.75□□□□□ -2.13
USP46P62068 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
USP46P62068 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
USP46P62068 AC073869.9-201ENST00000641610 120 ntBASIC1.75□□□□□ -2.13
USP46P62068 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USP46P62068 RNA5SP147-201ENST00000516493 109 ntBASIC1.74□□□□□ -2.13
USP46P62068 MIR3678-201ENST00000578455 94 ntBASIC1.74□□□□□ -2.13
USP46P62068 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
USP46P62068 MTND4LP19-201ENST00000403051 166 ntBASIC1.73□□□□□ -2.13
USP46P62068 SNORD124-201ENST00000459577 104 ntBASIC1.73□□□□□ -2.13
USP46P62068 RNA5SP47-201ENST00000517230 109 ntBASIC1.73□□□□□ -2.13
USP46P62068 Y_RNA.164-201ENST00000363709 102 ntBASIC1.72□□□□□ -2.13
USP46P62068 RNU6-726P-201ENST00000364680 107 ntBASIC1.72□□□□□ -2.13
USP46P62068 MT-TY-201ENST00000387409 66 ntBASIC1.72□□□□□ -2.13
USP46P62068 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
USP46P62068 MIR3612-201ENST00000579753 87 ntBASIC1.72□□□□□ -2.13
USP46P62068 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USP46P62068 RNU6-645P-201ENST00000364649 106 ntBASIC1.71□□□□□ -2.14
USP46P62068 MIR573-201ENST00000384964 99 ntBASIC1.71□□□□□ -2.14
USP46P62068 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
USP46P62068 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.71□□□□□ -2.14
USP46P62068 RNU6-990P-201ENST00000364385 104 ntBASIC1.7□□□□□ -2.14
USP46P62068 RNU6-1335P-201ENST00000365426 107 ntBASIC1.7□□□□□ -2.14
USP46P62068 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
USP46P62068 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
USP46P62068 RNU1-141P-201ENST00000364623 158 ntBASIC1.69□□□□□ -2.14
USP46P62068 MIR7-2-201ENST00000384970 110 ntBASIC1.69□□□□□ -2.14
USP46P62068 RNU5B-6P-201ENST00000516765 68 ntBASIC1.69□□□□□ -2.14
USP46P62068 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
USP46P62068 RNU6-499P-201ENST00000365615 107 ntBASIC1.68□□□□□ -2.14
USP46P62068 MIR200A-201ENST00000384875 90 ntBASIC1.68□□□□□ -2.14
USP46P62068 RNU6-269P-201ENST00000391077 97 ntBASIC1.68□□□□□ -2.14
USP46P62068 RNA5SP247-201ENST00000411181 105 ntBASIC1.68□□□□□ -2.14
USP46P62068 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
USP46P62068 MIR19B1-201ENST00000384829 87 ntBASIC1.67□□□□□ -2.14
USP46P62068 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
USP46P62068 RNU6-1053P-201ENST00000515930 101 ntBASIC1.67□□□□□ -2.14
USP46P62068 SCARNA16.5-201ENST00000517114 183 ntBASIC1.67□□□□□ -2.14
USP46P62068 MIR4498-201ENST00000577599 66 ntBASIC1.67□□□□□ -2.14
USP46P62068 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
USP46P62068 SNORA2.1-201ENST00000363089 137 ntBASIC1.66□□□□□ -2.14
USP46P62068 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
USP46P62068 AC110620.1-201ENST00000416042 228 ntBASIC1.66□□□□□ -2.14
USP46P62068 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
USP46P62068 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
USP46P62068 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
USP46P62068 RNA5SP484-201ENST00000458857 111 ntBASIC1.64□□□□□ -2.15
USP46P62068 RNU6-542P-201ENST00000516405 103 ntBASIC1.64□□□□□ -2.15
USP46P62068 SNORA8.2-201ENST00000384372 139 ntBASIC1.63□□□□□ -2.15
USP46P62068 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
USP46P62068 AC025627.3-201ENST00000582078 182 ntBASIC1.63□□□□□ -2.15
USP46P62068 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
USP46P62068 snoU13.31-201ENST00000607291 104 ntBASIC1.63□□□□□ -2.15
USP46P62068 SNORD114-4-201ENST00000363962 75 ntBASIC1.62□□□□□ -2.15
USP46P62068 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
USP46P62068 AC011195.1-201ENST00000578177 177 ntBASIC1.62□□□□□ -2.15
USP46P62068 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.62□□□□□ -2.15
USP46P62068 Y_RNA.375-201ENST00000365625 101 ntBASIC1.61□□□□□ -2.15
USP46P62068 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
USP46P62068 RNA5SP227-201ENST00000516184 113 ntBASIC1.61□□□□□ -2.15
USP46P62068 SNORA25.8-201ENST00000364831 128 ntBASIC1.6□□□□□ -2.15
USP46P62068 SNORA40.17-201ENST00000517256 115 ntBASIC1.6□□□□□ -2.15
USP46P62068 AC018659.1-201ENST00000551083 169 ntBASIC1.6□□□□□ -2.15
USP46P62068 SNORD114-24-201ENST00000365029 72 ntBASIC1.59□□□□□ -2.15
USP46P62068 SNORD26-201ENST00000384147 75 ntBASIC1.59□□□□□ -2.15
USP46P62068 MIR633-201ENST00000384821 98 ntBASIC1.59□□□□□ -2.15
USP46P62068 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
USP46P62068 SNORD99-201ENST00000408612 74 ntBASIC1.59□□□□□ -2.15
USP46P62068 snoU13.13-201ENST00000458842 104 ntBASIC1.59□□□□□ -2.15
USP46P62068 RNU6-656P-201ENST00000516785 107 ntBASIC1.59□□□□□ -2.15
USP46P62068 AC092634.7-201ENST00000621022 103 ntBASIC1.59□□□□□ -2.15
USP46P62068 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
USP46P62068 MIR548C-201ENST00000384815 97 ntBASIC1.58□□□□□ -2.16
USP46P62068 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
USP46P62068 RNU6-669P-201ENST00000365575 107 ntBASIC1.57□□□□□ -2.16
USP46P62068 RNU6-987P-201ENST00000384759 104 ntBASIC1.57□□□□□ -2.16
USP46P62068 RNA5SP255-201ENST00000516370 107 ntBASIC1.57□□□□□ -2.16
USP46P62068 AL162376.1-201ENST00000624117 175 ntBASIC1.57□□□□□ -2.16
USP46P62068 MIR18A-201ENST00000362310 71 ntBASIC1.56□□□□□ -2.16
USP46P62068 RNA5SP299-201ENST00000391203 116 ntBASIC1.56□□□□□ -2.16
USP46P62068 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
USP46P62068 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
USP46P62068 MIR6739-201ENST00000622461 75 ntBASIC1.56□□□□□ -2.16
USP46P62068 Y_RNA.226-201ENST00000364337 114 ntBASIC1.55□□□□□ -2.16
USP46P62068 RNU6-1162P-201ENST00000384443 104 ntBASIC1.55□□□□□ -2.16
USP46P62068 RNA5SP404-201ENST00000517118 132 ntBASIC1.55□□□□□ -2.16
USP46P62068 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
USP46P62068 MIR548V-201ENST00000584165 80 ntBASIC1.55□□□□□ -2.16
USP46P62068 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
USP46P62068 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USP46P62068 RNU4-37P-201ENST00000410214 84 ntBASIC1.54□□□□□ -2.16
USP46P62068 RNU6-321P-201ENST00000410912 106 ntBASIC1.54□□□□□ -2.16
USP46P62068 RNU6-1089P-201ENST00000516473 104 ntBASIC1.54□□□□□ -2.16
USP46P62068 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.54□□□□□ -2.16
USP46P62068 MIR6828-201ENST00000636181 60 ntBASIC1.54□□□□□ -2.16
USP46P62068 AC006210.1-201ENST00000424882 111 ntBASIC1.53□□□□□ -2.16
USP46P62068 RNA5SP268-201ENST00000516828 124 ntBASIC1.53□□□□□ -2.16
USP46P62068 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.53□□□□□ -2.16
USP46P62068 MIR4473-201ENST00000583731 91 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 266.8 ms