Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNU4-45P-201ENST00000365469 141 ntBASIC1.43□□□□□ -2.18
EPHA4P54764 RNA5SP47-201ENST00000517230 109 ntBASIC1.43□□□□□ -2.18
EPHA4P54764 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
EPHA4P54764 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 RNU6-321P-201ENST00000410912 106 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 RNA5SP255-201ENST00000516370 107 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 SCARNA16.5-201ENST00000517114 183 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 MIR4460-201ENST00000577862 86 ntBASIC1.42□□□□□ -2.18
EPHA4P54764 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
EPHA4P54764 RNU6-495P-201ENST00000362995 107 ntBASIC1.41□□□□□ -2.18
EPHA4P54764 RNU6-716P-201ENST00000365621 103 ntBASIC1.41□□□□□ -2.18
EPHA4P54764 RNU6-540P-201ENST00000384622 101 ntBASIC1.41□□□□□ -2.18
EPHA4P54764 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
EPHA4P54764 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.41□□□□□ -2.18
EPHA4P54764 RNU6-726P-201ENST00000364680 107 ntBASIC1.4□□□□□ -2.19
EPHA4P54764 SNORD115-31-201ENST00000365318 82 ntBASIC1.4□□□□□ -2.19
EPHA4P54764 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
EPHA4P54764 RNU6-881P-201ENST00000516813 102 ntBASIC1.4□□□□□ -2.19
EPHA4P54764 U6.111-201ENST00000636093 83 ntBASIC1.4□□□□□ -2.19
EPHA4P54764 MIR337-201ENST00000362281 93 ntBASIC1.39□□□□□ -2.19
EPHA4P54764 RNU6V-201ENST00000384105 107 ntBASIC1.39□□□□□ -2.19
EPHA4P54764 RNU6-604P-201ENST00000390917 100 ntBASIC1.39□□□□□ -2.19
EPHA4P54764 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.39□□□□□ -2.19
EPHA4P54764 MIR6509-201ENST00000614603 85 ntBASIC1.39□□□□□ -2.19
EPHA4P54764 Y_RNA.340-201ENST00000365330 92 ntBASIC1.38□□□□□ -2.19
EPHA4P54764 RNU6-1039P-201ENST00000383931 107 ntBASIC1.38□□□□□ -2.19
EPHA4P54764 SNORD45A-201ENST00000384512 84 ntBASIC1.38□□□□□ -2.19
EPHA4P54764 RNU6-1335P-201ENST00000365426 107 ntBASIC1.37□□□□□ -2.19
EPHA4P54764 SNORD99-201ENST00000408612 74 ntBASIC1.37□□□□□ -2.19
EPHA4P54764 RNA5SP247-201ENST00000411181 105 ntBASIC1.37□□□□□ -2.19
EPHA4P54764 TRMT112P2-201ENST00000512910 132 ntBASIC1.37□□□□□ -2.19
EPHA4P54764 NAMPTP3-201ENST00000569273 224 ntBASIC1.37□□□□□ -2.19
EPHA4P54764 AC011195.1-201ENST00000578177 177 ntBASIC1.37□□□□□ -2.19
EPHA4P54764 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
EPHA4P54764 RNU6-54P-201ENST00000365563 107 ntBASIC1.36□□□□□ -2.19
EPHA4P54764 MT-TY-201ENST00000387409 66 ntBASIC1.36□□□□□ -2.19
EPHA4P54764 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
EPHA4P54764 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
EPHA4P54764 Y_RNA.164-201ENST00000363709 102 ntBASIC1.35□□□□□ -2.19
EPHA4P54764 SNORA8.2-201ENST00000384372 139 ntBASIC1.35□□□□□ -2.19
EPHA4P54764 RNU6-800P-201ENST00000384473 103 ntBASIC1.35□□□□□ -2.19
EPHA4P54764 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
EPHA4P54764 RNA5SP227-201ENST00000516184 113 ntBASIC1.35□□□□□ -2.19
EPHA4P54764 RNU6-1216P-201ENST00000362590 107 ntBASIC1.34□□□□□ -2.19
EPHA4P54764 SNORD114-4-201ENST00000363962 75 ntBASIC1.34□□□□□ -2.19
EPHA4P54764 SNORD115-22-201ENST00000364456 82 ntBASIC1.34□□□□□ -2.19
EPHA4P54764 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
EPHA4P54764 Y_RNA.327-201ENST00000365201 102 ntBASIC1.34□□□□□ -2.19
EPHA4P54764 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.34□□□□□ -2.19
EPHA4P54764 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.34□□□□□ -2.19
EPHA4P54764 AL353770.2-201ENST00000620024 78 ntBASIC1.34□□□□□ -2.19
EPHA4P54764 MIR18A-201ENST00000362310 71 ntBASIC1.33□□□□□ -2.2
EPHA4P54764 RNU1-141P-201ENST00000364623 158 ntBASIC1.33□□□□□ -2.2
EPHA4P54764 AC093423.1-201ENST00000440817 142 ntBASIC1.33□□□□□ -2.2
EPHA4P54764 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
EPHA4P54764 SNORD113.1-201ENST00000363280 73 ntBASIC1.32□□□□□ -2.2
EPHA4P54764 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.32□□□□□ -2.2
EPHA4P54764 AC073869.9-201ENST00000641610 120 ntBASIC1.32□□□□□ -2.2
EPHA4P54764 MIR7-2-201ENST00000384970 110 ntBASIC1.31□□□□□ -2.2
EPHA4P54764 RNU6-269P-201ENST00000391077 97 ntBASIC1.31□□□□□ -2.2
EPHA4P54764 MTND4LP1-201ENST00000446263 157 ntBASIC1.31□□□□□ -2.2
EPHA4P54764 Y_RNA.226-201ENST00000364337 114 ntBASIC1.3□□□□□ -2.2
EPHA4P54764 RNU6-630P-201ENST00000391258 106 ntBASIC1.3□□□□□ -2.2
EPHA4P54764 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
EPHA4P54764 MIR6828-201ENST00000636181 60 ntBASIC1.3□□□□□ -2.2
EPHA4P54764 SNORA25.4-201ENST00000363666 124 ntBASIC1.29□□□□□ -2.2
EPHA4P54764 MIR203A-201ENST00000384836 110 ntBASIC1.29□□□□□ -2.2
EPHA4P54764 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.29□□□□□ -2.2
EPHA4P54764 AC069503.3-201ENST00000618674 145 ntBASIC1.29□□□□□ -2.2
EPHA4P54764 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
EPHA4P54764 Y_RNA.443-201ENST00000384135 111 ntBASIC1.28□□□□□ -2.2
EPHA4P54764 RNA5SP222-201ENST00000411039 105 ntBASIC1.28□□□□□ -2.2
EPHA4P54764 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.28□□□□□ -2.2
EPHA4P54764 RNA5SP268-201ENST00000516828 124 ntBASIC1.28□□□□□ -2.2
EPHA4P54764 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
EPHA4P54764 AL162376.1-201ENST00000624117 175 ntBASIC1.28□□□□□ -2.2
EPHA4P54764 RNU6-260P-201ENST00000384092 107 ntBASIC1.27□□□□□ -2.21
EPHA4P54764 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
EPHA4P54764 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
EPHA4P54764 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
EPHA4P54764 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
EPHA4P54764 MIR4661-201ENST00000582720 75 ntBASIC1.27□□□□□ -2.21
EPHA4P54764 MIR3657-201ENST00000584818 117 ntBASIC1.27□□□□□ -2.21
EPHA4P54764 RNA5SP484-201ENST00000458857 111 ntBASIC1.26□□□□□ -2.21
EPHA4P54764 SNORA2.1-201ENST00000363089 137 ntBASIC1.25□□□□□ -2.21
EPHA4P54764 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
EPHA4P54764 MIR1287-201ENST00000408492 90 ntBASIC1.25□□□□□ -2.21
EPHA4P54764 SNORD42B-201ENST00000458893 67 ntBASIC1.25□□□□□ -2.21
EPHA4P54764 RNA5SP94-201ENST00000516917 108 ntBASIC1.25□□□□□ -2.21
EPHA4P54764 AC005520.4-201ENST00000604337 90 ntBASIC1.25□□□□□ -2.21
EPHA4P54764 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
EPHA4P54764 Y_RNA.386-201ENST00000383913 105 ntBASIC1.24□□□□□ -2.21
EPHA4P54764 RNU6-471P-201ENST00000383944 106 ntBASIC1.24□□□□□ -2.21
EPHA4P54764 AC006210.1-201ENST00000424882 111 ntBASIC1.24□□□□□ -2.21
EPHA4P54764 AL353765.1-201ENST00000605514 183 ntBASIC1.24□□□□□ -2.21
EPHA4P54764 RNU6-668P-201ENST00000364180 107 ntBASIC1.23□□□□□ -2.21
EPHA4P54764 RNU5B-6P-201ENST00000516765 68 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms