Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDR1P51861 RNU1-93P-201ENST00000364704 169 ntBASIC1.28□□□□□ -2.2
CDR1P51861 Y_RNA.340-201ENST00000365330 92 ntBASIC1.28□□□□□ -2.2
CDR1P51861 RNU6-663P-201ENST00000391105 106 ntBASIC1.28□□□□□ -2.2
CDR1P51861 RNU6-752P-201ENST00000516376 102 ntBASIC1.28□□□□□ -2.2
CDR1P51861 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.28□□□□□ -2.2
CDR1P51861 MIR4773-1-201ENST00000637203 78 ntBASIC1.28□□□□□ -2.2
CDR1P51861 RNU6-382P-201ENST00000365181 106 ntBASIC1.27□□□□□ -2.21
CDR1P51861 MIR216B-201ENST00000390186 82 ntBASIC1.27□□□□□ -2.21
CDR1P51861 MIR1265-201ENST00000408444 86 ntBASIC1.27□□□□□ -2.21
CDR1P51861 RNU7-104P-201ENST00000459398 79 ntBASIC1.27□□□□□ -2.21
CDR1P51861 RNU6-274P-201ENST00000459566 107 ntBASIC1.27□□□□□ -2.21
CDR1P51861 MIR8053-201ENST00000613344 75 ntBASIC1.27□□□□□ -2.21
CDR1P51861 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDR1P51861 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDR1P51861 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
CDR1P51861 RNU6-800P-201ENST00000384473 103 ntBASIC1.26□□□□□ -2.21
CDR1P51861 MIR617-201ENST00000385030 97 ntBASIC1.26□□□□□ -2.21
CDR1P51861 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
CDR1P51861 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.26□□□□□ -2.21
CDR1P51861 AC002350.1-201ENST00000490759 375 ntBASIC1.26□□□□□ -2.21
CDR1P51861 AL136317.1-201ENST00000612653 226 ntBASIC1.26□□□□□ -2.21
CDR1P51861 MIR6515-201ENST00000619843 57 ntBASIC1.26□□□□□ -2.21
CDR1P51861 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
CDR1P51861 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CDR1P51861 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
CDR1P51861 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
CDR1P51861 MIR520E-201ENST00000384867 87 ntBASIC1.25□□□□□ -2.21
CDR1P51861 OR2A41P-201ENST00000473586 105 ntBASIC1.25□□□□□ -2.21
CDR1P51861 RNU6-1110P-201ENST00000516462 101 ntBASIC1.25□□□□□ -2.21
CDR1P51861 RNU6-135P-201ENST00000516769 101 ntBASIC1.25□□□□□ -2.21
CDR1P51861 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.25□□□□□ -2.21
CDR1P51861 SNORD45.1-201ENST00000363181 77 ntBASIC1.24□□□□□ -2.21
CDR1P51861 SNORD114-26-201ENST00000363543 72 ntBASIC1.24□□□□□ -2.21
CDR1P51861 SNORD115-22-201ENST00000364456 82 ntBASIC1.24□□□□□ -2.21
CDR1P51861 RNA5SP117-201ENST00000365294 118 ntBASIC1.24□□□□□ -2.21
CDR1P51861 SNORD45A-201ENST00000384512 84 ntBASIC1.24□□□□□ -2.21
CDR1P51861 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CDR1P51861 SNORD75.2-201ENST00000408784 58 ntBASIC1.24□□□□□ -2.21
CDR1P51861 AC067863.3-201ENST00000624172 122 ntBASIC1.24□□□□□ -2.21
CDR1P51861 RNU6-895P-201ENST00000384125 103 ntBASIC1.23□□□□□ -2.21
CDR1P51861 MIR519E-201ENST00000385075 84 ntBASIC1.23□□□□□ -2.21
CDR1P51861 MIR644A-201ENST00000385262 94 ntBASIC1.23□□□□□ -2.21
CDR1P51861 AC244098.3-201ENST00000424803 96 ntBASIC1.23□□□□□ -2.21
CDR1P51861 RNU7-24P-201ENST00000458867 62 ntBASIC1.23□□□□□ -2.21
CDR1P51861 RPS29P1-201ENST00000465274 159 ntBASIC1.23□□□□□ -2.21
CDR1P51861 RNU6-881P-201ENST00000516813 102 ntBASIC1.23□□□□□ -2.21
CDR1P51861 SNORD105-201ENST00000386910 85 ntBASIC1.22□□□□□ -2.21
CDR1P51861 RNU6-604P-201ENST00000390917 100 ntBASIC1.22□□□□□ -2.21
CDR1P51861 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
CDR1P51861 FABP5P4-201ENST00000437203 171 ntBASIC1.22□□□□□ -2.21
CDR1P51861 MIR4639-201ENST00000584938 69 ntBASIC1.22□□□□□ -2.21
CDR1P51861 MIR548O2-201ENST00000616090 70 ntBASIC1.22□□□□□ -2.21
CDR1P51861 RNU6-495P-201ENST00000362995 107 ntBASIC1.21□□□□□ -2.22
CDR1P51861 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
CDR1P51861 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
CDR1P51861 PVT1_3.1-201ENST00000620853 95 ntBASIC1.21□□□□□ -2.22
CDR1P51861 Y_RNA.205-201ENST00000364128 113 ntBASIC1.2□□□□□ -2.22
CDR1P51861 RNU6-471P-201ENST00000383944 106 ntBASIC1.2□□□□□ -2.22
CDR1P51861 SNORD28-201ENST00000384706 75 ntBASIC1.2□□□□□ -2.22
CDR1P51861 MIR19B1-201ENST00000384829 87 ntBASIC1.2□□□□□ -2.22
CDR1P51861 SNORD41.1-201ENST00000391000 69 ntBASIC1.2□□□□□ -2.22
CDR1P51861 AL691482.2-201ENST00000457453 84 ntBASIC1.2□□□□□ -2.22
CDR1P51861 RNU6-469P-201ENST00000516253 101 ntBASIC1.2□□□□□ -2.22
CDR1P51861 RNU6-1223P-201ENST00000517124 104 ntBASIC1.2□□□□□ -2.22
CDR1P51861 AC005520.4-201ENST00000604337 90 ntBASIC1.2□□□□□ -2.22
CDR1P51861 MIR6779-201ENST00000617283 64 ntBASIC1.2□□□□□ -2.22
CDR1P51861 AC244669.1-204ENST00000621564 178 ntBASIC1.2□□□□□ -2.22
CDR1P51861 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
CDR1P51861 SNORD113.1-201ENST00000363280 73 ntBASIC1.19□□□□□ -2.22
CDR1P51861 RNU7-74P-201ENST00000459104 62 ntBASIC1.19□□□□□ -2.22
CDR1P51861 RNU6-1039P-201ENST00000383931 107 ntBASIC1.18□□□□□ -2.22
CDR1P51861 Y_RNA.443-201ENST00000384135 111 ntBASIC1.18□□□□□ -2.22
CDR1P51861 RNU6-630P-201ENST00000391258 106 ntBASIC1.18□□□□□ -2.22
CDR1P51861 NAMPTP3-201ENST00000569273 224 ntBASIC1.18□□□□□ -2.22
CDR1P51861 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
CDR1P51861 RNU6-1216P-201ENST00000362590 107 ntBASIC1.17□□□□□ -2.22
CDR1P51861 SNORA25.4-201ENST00000363666 124 ntBASIC1.17□□□□□ -2.22
CDR1P51861 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
CDR1P51861 RNA5SP325-201ENST00000363756 130 ntBASIC1.17□□□□□ -2.22
CDR1P51861 RNU6-54P-201ENST00000365563 107 ntBASIC1.17□□□□□ -2.22
CDR1P51861 SNORD116-24-201ENST00000384549 92 ntBASIC1.17□□□□□ -2.22
CDR1P51861 MIR548J-201ENST00000408833 112 ntBASIC1.17□□□□□ -2.22
CDR1P51861 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
CDR1P51861 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
CDR1P51861 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDR1P51861 MIR598-201ENST00000384868 97 ntBASIC1.16□□□□□ -2.22
CDR1P51861 MIR200A-201ENST00000384875 90 ntBASIC1.16□□□□□ -2.22
CDR1P51861 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
CDR1P51861 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.16□□□□□ -2.22
CDR1P51861 AC093423.1-201ENST00000440817 142 ntBASIC1.16□□□□□ -2.22
CDR1P51861 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
CDR1P51861 RNA5SP47-201ENST00000517230 109 ntBASIC1.16□□□□□ -2.22
CDR1P51861 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
CDR1P51861 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
CDR1P51861 MIR6509-201ENST00000614603 85 ntBASIC1.15□□□□□ -2.23
CDR1P51861 RNU6-726P-201ENST00000364680 107 ntBASIC1.14□□□□□ -2.23
CDR1P51861 RNU6V-201ENST00000384105 107 ntBASIC1.14□□□□□ -2.23
CDR1P51861 MIR548L-201ENST00000408303 86 ntBASIC1.14□□□□□ -2.23
CDR1P51861 MIR3678-201ENST00000578455 94 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms