Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD115-25-201ENST00000362619 82 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 SNORD56B-201ENST00000384713 71 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 RNU6-182P-201ENST00000516970 105 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 RNA5SP169-201ENST00000517268 117 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 AL353621.2-201ENST00000605340 133 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 RNU6-86P-201ENST00000606534 107 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 MIR582-201ENST00000365731 98 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 RNU6-901P-201ENST00000384593 106 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 RNA5SP266-201ENST00000410273 108 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 snoU13.13-201ENST00000458842 104 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 RNU6-886P-201ENST00000384319 105 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 SNORA32.3-201ENST00000384772 121 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 MTND4LP9-201ENST00000427694 174 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 MIR4694-201ENST00000578534 80 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 AL035470.1-201ENST00000622571 220 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU7-55P-201ENST00000459426 62 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 AC097510.1-201ENST00000510945 133 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-772P-201ENST00000516042 105 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-65P-201ENST00000516332 98 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-719P-201ENST00000516671 104 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 MIR4536-1-201ENST00000583537 88 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 uc_338.36-201ENST00000622331 158 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-832P-201ENST00000363319 107 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 SNORD50.2-201ENST00000365465 70 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 U3.27-201ENST00000391237 200 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 MIR548E-201ENST00000408287 88 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 SNORD42B-201ENST00000458893 67 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 FGF7P7-201ENST00000514120 227 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 MIR3613-201ENST00000579844 87 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 AL157777.2-201ENST00000258070 137 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 RNU7-85P-201ENST00000458851 63 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 AL513043.2-201ENST00000573941 143 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 RNY3P2-201ENST00000362918 102 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 SNORD114-4-201ENST00000363962 75 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 MIR204-201ENST00000385200 110 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 RNU4-63P-201ENST00000411313 118 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 SNORD38.3-201ENST00000516599 73 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 MIR4679-2-201ENST00000578358 77 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 MIR4436A-201ENST00000585278 85 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 SNORD114-14-201ENST00000362723 75 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 SNORD2-201ENST00000459163 69 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 SNORA40.17-201ENST00000517256 115 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 AC068339.1-201ENST00000526965 141 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 AL391099.1-201ENST00000624635 187 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 RNU6-132P-201ENST00000383863 107 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 SNORA40-201ENST00000388090 126 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU6-257P-201ENST00000410238 98 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU7-107P-201ENST00000459121 61 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 MIR6851-201ENST00000617060 67 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU6-502P-201ENST00000362419 108 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 RNU6-476P-201ENST00000384726 107 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 RNU7-200P-201ENST00000516105 62 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
CXCL12P48061 MIR3140-201ENST00000583685 90 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 MIR5704-201ENST00000584029 77 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 AC103810.7-201ENST00000607821 91 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 RNU6-973P-201ENST00000364690 107 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 SNORD57-201ENST00000448188 72 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
CXCL12P48061 MIR4439-201ENST00000583746 80 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 SNORD45B-201ENST00000364617 72 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNU6-813P-201ENST00000384691 107 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MIR548A1-201ENST00000385041 97 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MT-TQ-201ENST00000387372 72 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 AC021146.6-201ENST00000514659 117 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNU6-346P-201ENST00000516288 111 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNU6-971P-201ENST00000516920 106 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNY1P9-201ENST00000532431 109 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MIR5009-201ENST00000578736 100 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MIR3064-201ENST00000581130 66 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 SNORA63.2-201ENST00000362603 126 ntBASIC-0.74□□□□□ -2.53
CXCL12P48061 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.74□□□□□ -2.53
CXCL12P48061 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms