Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MIR202-201ENST00000362219 110 ntBASIC-2.27□□□□□ -2.77
APOBP04114 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.27□□□□□ -2.77
APOBP04114 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.27□□□□□ -2.77
APOBP04114 SNORD113-5-201ENST00000607261 78 ntBASIC-2.27□□□□□ -2.77
APOBP04114 UBE2WP1-201ENST00000362030 340 ntBASIC-2.27□□□□□ -2.77
APOBP04114 Y_RNA.286-201ENST00000364813 102 ntBASIC-2.27□□□□□ -2.77
APOBP04114 RNU6-752P-201ENST00000516376 102 ntBASIC-2.27□□□□□ -2.77
APOBP04114 RNU6-1228P-201ENST00000391014 107 ntBASIC-2.27□□□□□ -2.77
APOBP04114 Y_RNA.424-201ENST00000384063 103 ntBASIC-2.27□□□□□ -2.77
APOBP04114 MIR513B-201ENST00000385136 84 ntBASIC-2.27□□□□□ -2.77
APOBP04114 MIR579-201ENST00000385221 98 ntBASIC-2.27□□□□□ -2.77
APOBP04114 AC009161.1-201ENST00000417306 376 ntBASIC-2.27□□□□□ -2.77
APOBP04114 RNU6-656P-201ENST00000516785 107 ntBASIC-2.27□□□□□ -2.77
APOBP04114 MIR4999-201ENST00000585029 91 ntBASIC-2.27□□□□□ -2.77
APOBP04114 MTND3P2-201ENST00000438452 342 ntBASIC-2.28□□□□□ -2.77
APOBP04114 RNU7-85P-201ENST00000458851 63 ntBASIC-2.28□□□□□ -2.77
APOBP04114 RNU6-1038P-201ENST00000516516 104 ntBASIC-2.28□□□□□ -2.77
APOBP04114 MIR5701-3-201ENST00000578890 82 ntBASIC-2.28□□□□□ -2.77
APOBP04114 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.28□□□□□ -2.77
APOBP04114 MIR5701-1-201ENST00000585138 82 ntBASIC-2.28□□□□□ -2.77
APOBP04114 MIR5701-2-201ENST00000615634 82 ntBASIC-2.28□□□□□ -2.77
APOBP04114 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.28□□□□□ -2.77
APOBP04114 Y_RNA.373-201ENST00000365600 103 ntBASIC-2.28□□□□□ -2.77
APOBP04114 SNORA24B-201ENST00000384176 131 ntBASIC-2.28□□□□□ -2.77
APOBP04114 RNU6-1156P-201ENST00000410365 100 ntBASIC-2.28□□□□□ -2.77
APOBP04114 MTND2P30-201ENST00000456663 382 ntBASIC-2.28□□□□□ -2.77
APOBP04114 RNU6-1120P-201ENST00000362988 108 ntBASIC-2.28□□□□□ -2.77
APOBP04114 SNORD45.2-201ENST00000363552 72 ntBASIC-2.28□□□□□ -2.77
APOBP04114 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.28□□□□□ -2.77
APOBP04114 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.28□□□□□ -2.77
APOBP04114 AL021368.1-201ENST00000607490 540 ntBASIC-2.28□□□□□ -2.77
APOBP04114 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.29□□□□□ -2.78
APOBP04114 MIR125B1-201ENST00000385236 88 ntBASIC-2.29□□□□□ -2.78
APOBP04114 RNU6-764P-201ENST00000516396 105 ntBASIC-2.29□□□□□ -2.78
APOBP04114 RNU4-68P-201ENST00000364314 141 ntBASIC-2.29□□□□□ -2.78
APOBP04114 RNU6-974P-201ENST00000384099 108 ntBASIC-2.29□□□□□ -2.78
APOBP04114 RNU6-976P-201ENST00000516086 111 ntBASIC-2.29□□□□□ -2.78
APOBP04114 RNU7-174P-201ENST00000516248 59 ntBASIC-2.29□□□□□ -2.78
APOBP04114 U4.4-201ENST00000620626 117 ntBASIC-2.29□□□□□ -2.78
APOBP04114 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.29□□□□□ -2.78
APOBP04114 SNORD50.2-201ENST00000365465 70 ntBASIC-2.29□□□□□ -2.78
APOBP04114 RNA5SP292-201ENST00000390974 118 ntBASIC-2.29□□□□□ -2.78
APOBP04114 AC037487.3-201ENST00000606668 112 ntBASIC-2.29□□□□□ -2.78
APOBP04114 MIR124-1-201ENST00000385275 85 ntBASIC-2.29□□□□□ -2.78
APOBP04114 SNORD5.1-201ENST00000458800 75 ntBASIC-2.29□□□□□ -2.78
APOBP04114 AC006927.3-201ENST00000638789 384 ntBASIC-2.3□□□□□ -2.78
APOBP04114 RNU6-1149P-201ENST00000516810 97 ntBASIC-2.3□□□□□ -2.78
APOBP04114 AC093424.1-201ENST00000604999 338 ntBASIC-2.3□□□□□ -2.78
APOBP04114 Y_RNA.301-201ENST00000364990 103 ntBASIC-2.3□□□□□ -2.78
APOBP04114 RNU5F-7P-201ENST00000363696 115 ntBASIC-2.31□□□□□ -2.78
APOBP04114 MIR759-201ENST00000390224 91 ntBASIC-2.31□□□□□ -2.78
APOBP04114 SNORA69.1-201ENST00000390904 137 ntBASIC-2.31□□□□□ -2.78
APOBP04114 SNORA18.6-201ENST00000516792 115 ntBASIC-2.31□□□□□ -2.78
APOBP04114 AC005899.2-201ENST00000584353 90 ntBASIC-2.31□□□□□ -2.78
APOBP04114 RNU6-698P-201ENST00000363523 107 ntBASIC-2.31□□□□□ -2.78
APOBP04114 RNU6-34P-201ENST00000364874 107 ntBASIC-2.31□□□□□ -2.78
APOBP04114 RNU7-4P-201ENST00000516961 62 ntBASIC-2.31□□□□□ -2.78
APOBP04114 AC025166.1-201ENST00000612411 163 ntBASIC-2.31□□□□□ -2.78
APOBP04114 SNORA63-201ENST00000363450 132 ntBASIC-2.32□□□□□ -2.78
APOBP04114 RNU6-520P-201ENST00000384717 104 ntBASIC-2.32□□□□□ -2.78
APOBP04114 RNA5SP449-201ENST00000516871 130 ntBASIC-2.32□□□□□ -2.78
APOBP04114 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.32□□□□□ -2.78
APOBP04114 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.32□□□□□ -2.78
APOBP04114 RNU6-554P-201ENST00000410466 106 ntBASIC-2.32□□□□□ -2.78
APOBP04114 SNORD113-2-201ENST00000391082 72 ntBASIC-2.32□□□□□ -2.78
APOBP04114 Y_RNA.418-201ENST00000384029 102 ntBASIC-2.32□□□□□ -2.78
APOBP04114 RNU6-587P-201ENST00000391282 106 ntBASIC-2.32□□□□□ -2.78
APOBP04114 RNU4-43P-201ENST00000410628 137 ntBASIC-2.33□□□□□ -2.78
APOBP04114 AL442128.1-201ENST00000615151 90 ntBASIC-2.33□□□□□ -2.78
APOBP04114 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.33□□□□□ -2.78
APOBP04114 SNORD116-16-201ENST00000384533 92 ntBASIC-2.33□□□□□ -2.78
APOBP04114 RNU6-521P-201ENST00000516663 105 ntBASIC-2.33□□□□□ -2.78
APOBP04114 AL513043.2-201ENST00000573941 143 ntBASIC-2.33□□□□□ -2.78
APOBP04114 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.33□□□□□ -2.78
APOBP04114 MTND4LP30-201ENST00000454092 297 ntBASIC-2.34□□□□□ -2.78
APOBP04114 RNU6-334P-201ENST00000517072 102 ntBASIC-2.34□□□□□ -2.78
APOBP04114 U6.81-201ENST00000612550 106 ntBASIC-2.34□□□□□ -2.78
APOBP04114 RNU6-358P-201ENST00000516564 75 ntBASIC-2.34□□□□□ -2.78
APOBP04114 AC062037.1-201ENST00000605302 128 ntBASIC-2.34□□□□□ -2.78
APOBP04114 AC092794.1-201ENST00000612734 582 ntBASIC-2.34□□□□□ -2.78
APOBP04114 RNU7-123P-201ENST00000515911 60 ntBASIC-2.34□□□□□ -2.78
APOBP04114 RNU7-6P-201ENST00000516845 62 ntBASIC-2.34□□□□□ -2.78
APOBP04114 SNORD42A-201ENST00000459584 64 ntBASIC-2.35□□□□□ -2.79
APOBP04114 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.35□□□□□ -2.79
APOBP04114 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.35□□□□□ -2.79
APOBP04114 AC083904.1-201ENST00000487828 231 ntBASIC-2.35□□□□□ -2.79
APOBP04114 SNORD1B-201ENST00000363091 84 ntBASIC-2.35□□□□□ -2.79
APOBP04114 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.35□□□□□ -2.79
APOBP04114 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.36□□□□□ -2.79
APOBP04114 RNU6-306P-201ENST00000384617 107 ntBASIC-2.36□□□□□ -2.79
APOBP04114 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.36□□□□□ -2.79
APOBP04114 MTND1P1-201ENST00000445453 368 ntBASIC-2.36□□□□□ -2.79
APOBP04114 RNU6-240P-201ENST00000516098 97 ntBASIC-2.36□□□□□ -2.79
APOBP04114 AC025521.1-201ENST00000621624 286 ntBASIC-2.36□□□□□ -2.79
APOBP04114 AC021753.1-201ENST00000635724 168 ntBASIC-2.36□□□□□ -2.79
APOBP04114 MIR4426-201ENST00000640330 63 ntBASIC-2.36□□□□□ -2.79
APOBP04114 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.36□□□□□ -2.79
APOBP04114 MIR3672-201ENST00000584290 82 ntBASIC-2.36□□□□□ -2.79
APOBP04114 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.37□□□□□ -2.79
APOBP04114 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms