Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIR934-201ENST00000401241 83 ntBASIC1.97□□□□□ -2.09
ALDH1A1P00352 MIR4452-201ENST00000583004 71 ntBASIC1.97□□□□□ -2.09
ALDH1A1P00352 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
ALDH1A1P00352 RNU6-990P-201ENST00000364385 104 ntBASIC1.96□□□□□ -2.1
ALDH1A1P00352 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
ALDH1A1P00352 AC067863.3-201ENST00000624172 122 ntBASIC1.96□□□□□ -2.1
ALDH1A1P00352 SNORA75.1-201ENST00000391130 148 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 RNU6-994P-201ENST00000410507 111 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 RNA5SP220-201ENST00000516298 104 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 RNA5SP147-201ENST00000516493 109 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 RN7SKP88-201ENST00000516847 250 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 7SK.8-201ENST00000612110 250 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 7SK.11-201ENST00000615477 250 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 7SK.13-201ENST00000622040 250 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
ALDH1A1P00352 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
ALDH1A1P00352 SNORD60.1-201ENST00000362451 73 ntBASIC1.94□□□□□ -2.1
ALDH1A1P00352 SNORA7.1-201ENST00000363750 139 ntBASIC1.94□□□□□ -2.1
ALDH1A1P00352 MIR100-201ENST00000385259 80 ntBASIC1.94□□□□□ -2.1
ALDH1A1P00352 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.94□□□□□ -2.1
ALDH1A1P00352 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.94□□□□□ -2.1
ALDH1A1P00352 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
ALDH1A1P00352 RNU6-302P-201ENST00000365249 107 ntBASIC1.93□□□□□ -2.1
ALDH1A1P00352 RNA5SP117-201ENST00000365294 118 ntBASIC1.93□□□□□ -2.1
ALDH1A1P00352 SNORA80D-201ENST00000384488 135 ntBASIC1.93□□□□□ -2.1
ALDH1A1P00352 MIR520F-201ENST00000384824 87 ntBASIC1.93□□□□□ -2.1
ALDH1A1P00352 RNU7-90P-201ENST00000459216 62 ntBASIC1.93□□□□□ -2.1
ALDH1A1P00352 MIR1-1-201ENST00000362147 71 ntBASIC1.92□□□□□ -2.1
ALDH1A1P00352 RNU1-42P-201ENST00000364033 160 ntBASIC1.92□□□□□ -2.1
ALDH1A1P00352 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
ALDH1A1P00352 MT-TY-201ENST00000387409 66 ntBASIC1.91□□□□□ -2.1
ALDH1A1P00352 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ALDH1A1P00352 SNORD41.1-201ENST00000391000 69 ntBASIC1.91□□□□□ -2.1
ALDH1A1P00352 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
ALDH1A1P00352 RNU7-74P-201ENST00000459104 62 ntBASIC1.91□□□□□ -2.1
ALDH1A1P00352 AL136317.1-201ENST00000612653 226 ntBASIC1.91□□□□□ -2.1
ALDH1A1P00352 SNORA67.6-201ENST00000391093 99 ntBASIC1.9□□□□□ -2.11
ALDH1A1P00352 SNORD79.1-201ENST00000516069 84 ntBASIC1.9□□□□□ -2.11
ALDH1A1P00352 RNA5SP102-201ENST00000516865 106 ntBASIC1.9□□□□□ -2.11
ALDH1A1P00352 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
ALDH1A1P00352 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
ALDH1A1P00352 MIR548V-201ENST00000584165 80 ntBASIC1.9□□□□□ -2.11
ALDH1A1P00352 RMST_2.1-201ENST00000617263 136 ntBASIC1.9□□□□□ -2.11
ALDH1A1P00352 RNU6-910P-201ENST00000390844 107 ntBASIC1.89□□□□□ -2.11
ALDH1A1P00352 MIR1827-201ENST00000408549 66 ntBASIC1.89□□□□□ -2.11
ALDH1A1P00352 RNA5SP480-201ENST00000516840 109 ntBASIC1.89□□□□□ -2.11
ALDH1A1P00352 MIR4421-201ENST00000578133 69 ntBASIC1.89□□□□□ -2.11
ALDH1A1P00352 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.89□□□□□ -2.11
ALDH1A1P00352 MIR6734-201ENST00000621166 68 ntBASIC1.89□□□□□ -2.11
ALDH1A1P00352 Y_RNA.250-201ENST00000364542 110 ntBASIC1.88□□□□□ -2.11
ALDH1A1P00352 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
ALDH1A1P00352 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
ALDH1A1P00352 AL157398.1-201ENST00000452981 186 ntBASIC1.88□□□□□ -2.11
ALDH1A1P00352 AC018659.1-201ENST00000551083 169 ntBASIC1.88□□□□□ -2.11
ALDH1A1P00352 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
ALDH1A1P00352 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.88□□□□□ -2.11
ALDH1A1P00352 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.87□□□□□ -2.11
ALDH1A1P00352 RNU1-92P-201ENST00000517017 135 ntBASIC1.87□□□□□ -2.11
ALDH1A1P00352 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
ALDH1A1P00352 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
ALDH1A1P00352 MIR521-2-201ENST00000384818 87 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 MIR630-201ENST00000384957 97 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 MIR644A-201ENST00000385262 94 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 AC002350.1-201ENST00000490759 375 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 RNU6-902P-201ENST00000517212 91 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 MIR4460-201ENST00000577862 86 ntBASIC1.86□□□□□ -2.11
ALDH1A1P00352 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ALDH1A1P00352 RNU6-1162P-201ENST00000384443 104 ntBASIC1.85□□□□□ -2.11
ALDH1A1P00352 SNORA31.24-201ENST00000517232 57 ntBASIC1.85□□□□□ -2.11
ALDH1A1P00352 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.85□□□□□ -2.11
ALDH1A1P00352 MIR4639-201ENST00000584938 69 ntBASIC1.85□□□□□ -2.11
ALDH1A1P00352 AC244669.1-204ENST00000621564 178 ntBASIC1.85□□□□□ -2.11
ALDH1A1P00352 SNORD28-201ENST00000384706 75 ntBASIC1.84□□□□□ -2.11
ALDH1A1P00352 RNU6-135P-201ENST00000516769 101 ntBASIC1.84□□□□□ -2.11
ALDH1A1P00352 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALDH1A1P00352 AL353770.2-201ENST00000620024 78 ntBASIC1.83□□□□□ -2.12
ALDH1A1P00352 RNU6-1312P-201ENST00000362425 108 ntBASIC1.82□□□□□ -2.12
ALDH1A1P00352 RNU1-141P-201ENST00000364623 158 ntBASIC1.82□□□□□ -2.12
ALDH1A1P00352 MIR4422-201ENST00000581938 83 ntBASIC1.82□□□□□ -2.12
ALDH1A1P00352 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
ALDH1A1P00352 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALDH1A1P00352 SNORD114-4-201ENST00000363962 75 ntBASIC1.81□□□□□ -2.12
ALDH1A1P00352 RNU6-726P-201ENST00000364680 107 ntBASIC1.81□□□□□ -2.12
ALDH1A1P00352 SNORD114-22-201ENST00000365423 72 ntBASIC1.81□□□□□ -2.12
ALDH1A1P00352 RNU7-174P-201ENST00000516248 59 ntBASIC1.81□□□□□ -2.12
ALDH1A1P00352 RNU6-698P-201ENST00000363523 107 ntBASIC1.8□□□□□ -2.12
ALDH1A1P00352 RNU6-34P-201ENST00000364874 107 ntBASIC1.8□□□□□ -2.12
ALDH1A1P00352 MIR548C-201ENST00000384815 97 ntBASIC1.8□□□□□ -2.12
ALDH1A1P00352 RNU4-88P-201ENST00000411220 86 ntBASIC1.8□□□□□ -2.12
ALDH1A1P00352 snoU13.13-201ENST00000458842 104 ntBASIC1.8□□□□□ -2.12
ALDH1A1P00352 U2.7-201ENST00000619197 100 ntBASIC1.8□□□□□ -2.12
ALDH1A1P00352 SNORD114-26-201ENST00000363543 72 ntBASIC1.79□□□□□ -2.12
ALDH1A1P00352 MIR517B-201ENST00000385102 67 ntBASIC1.79□□□□□ -2.12
ALDH1A1P00352 SNORD113-2-201ENST00000391082 72 ntBASIC1.79□□□□□ -2.12
ALDH1A1P00352 MIR6078-201ENST00000611069 100 ntBASIC1.79□□□□□ -2.12
ALDH1A1P00352 U4.4-201ENST00000620626 117 ntBASIC1.79□□□□□ -2.12
ALDH1A1P00352 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 322.5 ms