Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.61□□□□□ -2.51
TRIM3O75382 AL157777.2-201ENST00000258070 137 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 RNY1P7-201ENST00000384743 110 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 RNU7-107P-201ENST00000459121 61 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 RNU6-75P-201ENST00000515944 104 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 RNU7-200P-201ENST00000516105 62 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 MIR4694-201ENST00000578534 80 ntBASIC-0.62□□□□□ -2.51
TRIM3O75382 RNU6-832P-201ENST00000363319 107 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 RNU6-54P-201ENST00000365563 107 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 SNORA3B-201ENST00000391305 131 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 RNU6-257P-201ENST00000410238 98 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 RNA5SP66-201ENST00000517178 101 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 MIR4536-1-201ENST00000583537 88 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 MIR6086-201ENST00000638065 55 ntBASIC-0.63□□□□□ -2.51
TRIM3O75382 MIR9-2-201ENST00000384838 87 ntBASIC-0.64□□□□□ -2.51
TRIM3O75382 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.64□□□□□ -2.51
TRIM3O75382 RNU6-65P-201ENST00000516332 98 ntBASIC-0.64□□□□□ -2.51
TRIM3O75382 AC090425.1-201ENST00000610007 140 ntBASIC-0.64□□□□□ -2.51
TRIM3O75382 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 AL445193.1-201ENST00000441183 141 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 snoU13.19-201ENST00000459148 104 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 RNU6-346P-201ENST00000516288 111 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 RNU6-719P-201ENST00000516671 104 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 AC068339.1-201ENST00000526965 141 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 MIR3613-201ENST00000579844 87 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.65□□□□□ -2.51
TRIM3O75382 RNY3P2-201ENST00000362918 102 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 MIR196A1-201ENST00000388006 70 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 RNA5SP25-201ENST00000410815 110 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 RNA5SP67-201ENST00000516422 131 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 RNU6-971P-201ENST00000516920 106 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 MIR4679-2-201ENST00000578358 77 ntBASIC-0.66□□□□□ -2.52
TRIM3O75382 SNORD114-15-201ENST00000364687 72 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 SNORD50.2-201ENST00000365465 70 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 SNORA49-201ENST00000386157 136 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 snosnR66.1-201ENST00000391095 99 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 FGF7P7-201ENST00000514120 227 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 AL513043.2-201ENST00000573941 143 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.67□□□□□ -2.52
TRIM3O75382 SNORD115-25-201ENST00000362619 82 ntBASIC-0.68□□□□□ -2.52
TRIM3O75382 RNU6-900P-201ENST00000384498 102 ntBASIC-0.68□□□□□ -2.52
TRIM3O75382 RNU6-901P-201ENST00000384593 106 ntBASIC-0.68□□□□□ -2.52
TRIM3O75382 MIR548A1-201ENST00000385041 97 ntBASIC-0.68□□□□□ -2.52
TRIM3O75382 MIR548AX-201ENST00000580117 73 ntBASIC-0.68□□□□□ -2.52
TRIM3O75382 MIR4324-201ENST00000584846 72 ntBASIC-0.68□□□□□ -2.52
TRIM3O75382 AC093726.3-201ENST00000637588 150 ntBASIC-0.68□□□□□ -2.52
TRIM3O75382 MIR582-201ENST00000365731 98 ntBASIC-0.69□□□□□ -2.52
TRIM3O75382 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.69□□□□□ -2.52
TRIM3O75382 U3.27-201ENST00000391237 200 ntBASIC-0.69□□□□□ -2.52
TRIM3O75382 RNU7-85P-201ENST00000458851 63 ntBASIC-0.69□□□□□ -2.52
TRIM3O75382 RNU6-255P-201ENST00000516957 105 ntBASIC-0.69□□□□□ -2.52
TRIM3O75382 SNORD56B-201ENST00000384713 71 ntBASIC-0.7□□□□□ -2.52
TRIM3O75382 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.7□□□□□ -2.52
TRIM3O75382 AC145423.2-201ENST00000610631 239 ntBASIC-0.7□□□□□ -2.52
TRIM3O75382 MIR6738-201ENST00000619620 64 ntBASIC-0.7□□□□□ -2.52
TRIM3O75382 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.71□□□□□ -2.52
TRIM3O75382 AL078595.1-201ENST00000404458 226 ntBASIC-0.71□□□□□ -2.52
TRIM3O75382 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.71□□□□□ -2.52
TRIM3O75382 snoU13.13-201ENST00000458842 104 ntBASIC-0.71□□□□□ -2.52
TRIM3O75382 SNORD42B-201ENST00000458893 67 ntBASIC-0.71□□□□□ -2.52
TRIM3O75382 AC097510.1-201ENST00000510945 133 ntBASIC-0.71□□□□□ -2.52
TRIM3O75382 MIR5009-201ENST00000578736 100 ntBASIC-0.71□□□□□ -2.52
TRIM3O75382 SNORD114-4-201ENST00000363962 75 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 SNORD45B-201ENST00000364617 72 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 RNU6-132P-201ENST00000383863 107 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 MIR548E-201ENST00000408287 88 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 SNORD33.1-201ENST00000516213 88 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 MIR3914-2-201ENST00000637339 95 ntBASIC-0.72□□□□□ -2.52
TRIM3O75382 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.73□□□□□ -2.53
TRIM3O75382 RNU6-10P-201ENST00000384036 107 ntBASIC-0.73□□□□□ -2.53
TRIM3O75382 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.73□□□□□ -2.53
TRIM3O75382 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.73□□□□□ -2.53
TRIM3O75382 SNORD57-201ENST00000448188 72 ntBASIC-0.73□□□□□ -2.53
TRIM3O75382 MIR4439-201ENST00000583746 80 ntBASIC-0.73□□□□□ -2.53
TRIM3O75382 AC103810.7-201ENST00000607821 91 ntBASIC-0.73□□□□□ -2.53
TRIM3O75382 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.74□□□□□ -2.53
TRIM3O75382 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.74□□□□□ -2.53
TRIM3O75382 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
TRIM3O75382 AC021146.6-201ENST00000514659 117 ntBASIC-0.74□□□□□ -2.53
TRIM3O75382 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.74□□□□□ -2.53
TRIM3O75382 MIR4280-201ENST00000582178 76 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 235.1 ms