Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.88□□□□□ -2.55
CREB3O43889 MIR652-201ENST00000385278 98 ntBASIC-0.88□□□□□ -2.55
CREB3O43889 MTND5P18-201ENST00000445624 1801 ntBASIC-0.88□□□□□ -2.55
CREB3O43889 RNU6-664P-201ENST00000362381 107 ntBASIC-0.89□□□□□ -2.55
CREB3O43889 RNU6-935P-201ENST00000410371 100 ntBASIC-0.89□□□□□ -2.55
CREB3O43889 RNU6-235P-201ENST00000362644 107 ntBASIC-0.9□□□□□ -2.55
CREB3O43889 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.9□□□□□ -2.55
CREB3O43889 SNORD38.3-201ENST00000516599 73 ntBASIC-0.9□□□□□ -2.55
CREB3O43889 MIR6851-201ENST00000617060 67 ntBASIC-0.9□□□□□ -2.55
CREB3O43889 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.91□□□□□ -2.56
CREB3O43889 snoU13.13-201ENST00000458842 104 ntBASIC-0.91□□□□□ -2.56
CREB3O43889 MIR4696-201ENST00000581431 70 ntBASIC-0.91□□□□□ -2.56
CREB3O43889 RNU6-86P-201ENST00000606534 107 ntBASIC-0.91□□□□□ -2.56
CREB3O43889 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.92□□□□□ -2.56
CREB3O43889 RNU6-886P-201ENST00000384319 105 ntBASIC-0.92□□□□□ -2.56
CREB3O43889 RNY1P7-201ENST00000384743 110 ntBASIC-0.92□□□□□ -2.56
CREB3O43889 RNU7-55P-201ENST00000459426 62 ntBASIC-0.92□□□□□ -2.56
CREB3O43889 SNORD115-25-201ENST00000362619 82 ntBASIC-0.93□□□□□ -2.56
CREB3O43889 SNORA49-201ENST00000386157 136 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 SNORA13-201ENST00000458790 133 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 RNU6-426P-201ENST00000516464 97 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 RNU6-881P-201ENST00000516813 102 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 AC145423.2-201ENST00000610631 239 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 MIR548O2-201ENST00000616090 70 ntBASIC-0.94□□□□□ -2.56
CREB3O43889 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.95□□□□□ -2.56
CREB3O43889 SNORD2-201ENST00000459163 69 ntBASIC-0.95□□□□□ -2.56
CREB3O43889 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.96□□□□□ -2.56
CREB3O43889 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.96□□□□□ -2.56
CREB3O43889 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.96□□□□□ -2.56
CREB3O43889 SNORA40.17-201ENST00000517256 115 ntBASIC-0.96□□□□□ -2.56
CREB3O43889 MIR4694-201ENST00000578534 80 ntBASIC-0.96□□□□□ -2.56
CREB3O43889 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.97□□□□□ -2.56
CREB3O43889 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.97□□□□□ -2.56
CREB3O43889 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.97□□□□□ -2.56
CREB3O43889 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
CREB3O43889 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 MIR518B-201ENST00000385127 83 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 SNORA40-201ENST00000388090 126 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 U3.27-201ENST00000391237 200 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 MTND5P41-201ENST00000517498 206 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 MIR4679-2-201ENST00000578358 77 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 MIR3179-1-201ENST00000578940 84 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 MIR3179-2-201ENST00000579107 84 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 MIR3179-3-201ENST00000579566 84 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.98□□□□□ -2.57
CREB3O43889 MIR3179-4-201ENST00000617599 84 ntBASIC-0.98□□□□□ -2.57
CREB3O43889 RNU6-502P-201ENST00000362419 108 ntBASIC-0.99□□□□□ -2.57
CREB3O43889 RNU6-973P-201ENST00000364690 107 ntBASIC-0.99□□□□□ -2.57
CREB3O43889 RNU6-721P-201ENST00000410155 105 ntBASIC-0.99□□□□□ -2.57
CREB3O43889 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.99□□□□□ -2.57
CREB3O43889 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.99□□□□□ -2.57
CREB3O43889 SNORD114-4-201ENST00000363962 75 ntBASIC-1□□□□□ -2.57
CREB3O43889 RNU4-36P-201ENST00000364294 144 ntBASIC-1□□□□□ -2.57
CREB3O43889 Y_RNA.246-201ENST00000364495 108 ntBASIC-1□□□□□ -2.57
CREB3O43889 SNX3P1X-201ENST00000414887 175 ntBASIC-1□□□□□ -2.57
CREB3O43889 MTND4LP9-201ENST00000427694 174 ntBASIC-1□□□□□ -2.57
CREB3O43889 RNU6-772P-201ENST00000516042 105 ntBASIC-1□□□□□ -2.57
CREB3O43889 RNU6-65P-201ENST00000516332 98 ntBASIC-1□□□□□ -2.57
CREB3O43889 MIR451A-201ENST00000385059 72 ntBASIC-1.01□□□□□ -2.57
CREB3O43889 MIR577-201ENST00000385196 96 ntBASIC-1.01□□□□□ -2.57
CREB3O43889 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.01□□□□□ -2.57
CREB3O43889 RNA5SP272-201ENST00000516095 111 ntBASIC-1.01□□□□□ -2.57
CREB3O43889 SCARNA17-201ENST00000516183 144 ntBASIC-1.01□□□□□ -2.57
CREB3O43889 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.01□□□□□ -2.57
CREB3O43889 AL157777.2-201ENST00000258070 137 ntBASIC-1.02□□□□□ -2.57
CREB3O43889 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.02□□□□□ -2.57
CREB3O43889 SNORD22.1-201ENST00000516331 125 ntBASIC-1.02□□□□□ -2.57
CREB3O43889 MIR5704-201ENST00000584029 77 ntBASIC-1.02□□□□□ -2.57
CREB3O43889 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.03□□□□□ -2.57
CREB3O43889 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.03□□□□□ -2.57
CREB3O43889 RNU6-476P-201ENST00000384726 107 ntBASIC-1.03□□□□□ -2.57
CREB3O43889 MIR587-201ENST00000384845 96 ntBASIC-1.03□□□□□ -2.57
CREB3O43889 RNU6-762P-201ENST00000517107 102 ntBASIC-1.03□□□□□ -2.57
CREB3O43889 MIR4439-201ENST00000583746 80 ntBASIC-1.03□□□□□ -2.57
CREB3O43889 RNY3P2-201ENST00000362918 102 ntBASIC-1.04□□□□□ -2.58
CREB3O43889 MIR582-201ENST00000365731 98 ntBASIC-1.04□□□□□ -2.58
CREB3O43889 SNORD83B-201ENST00000386745 93 ntBASIC-1.04□□□□□ -2.58
CREB3O43889 MIR548E-201ENST00000408287 88 ntBASIC-1.04□□□□□ -2.58
CREB3O43889 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.04□□□□□ -2.58
CREB3O43889 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.04□□□□□ -2.58
CREB3O43889 RNU6-832P-201ENST00000363319 107 ntBASIC-1.05□□□□□ -2.58
CREB3O43889 SNORD114-25-201ENST00000363742 72 ntBASIC-1.05□□□□□ -2.58
CREB3O43889 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.05□□□□□ -2.58
CREB3O43889 AC022137.1-201ENST00000483735 151 ntBASIC-1.05□□□□□ -2.58
CREB3O43889 MIR4536-1-201ENST00000583537 88 ntBASIC-1.05□□□□□ -2.58
CREB3O43889 MIR6854-201ENST00000614935 69 ntBASIC-1.05□□□□□ -2.58
CREB3O43889 RNU6-54P-201ENST00000365563 107 ntBASIC-1.06□□□□□ -2.58
CREB3O43889 MIR517B-201ENST00000385102 67 ntBASIC-1.06□□□□□ -2.58
CREB3O43889 AC097510.1-201ENST00000510945 133 ntBASIC-1.06□□□□□ -2.58
CREB3O43889 RNU7-200P-201ENST00000516105 62 ntBASIC-1.06□□□□□ -2.58
CREB3O43889 SNORD74.6-201ENST00000364796 70 ntBASIC-1.07□□□□□ -2.58
CREB3O43889 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.07□□□□□ -2.58
CREB3O43889 MIR1468-201ENST00000410600 86 ntBASIC-1.07□□□□□ -2.58
CREB3O43889 AP000533.3-201ENST00000447704 118 ntBASIC-1.07□□□□□ -2.58
CREB3O43889 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.08□□□□□ -2.58
CREB3O43889 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.08□□□□□ -2.58
CREB3O43889 SNORD45B-201ENST00000364617 72 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms