Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.4□□□□□ -2.35
MBD3L4A6NDZ8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.4□□□□□ -2.35
MBD3L4A6NDZ8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
MBD3L4A6NDZ8 RNU4-32P-201ENST00000363404 141 ntBASIC0.39□□□□□ -2.35
MBD3L4A6NDZ8 Y_RNA.239-201ENST00000364444 113 ntBASIC0.39□□□□□ -2.35
MBD3L4A6NDZ8 AC073261.1-201ENST00000429409 121 ntBASIC0.39□□□□□ -2.35
MBD3L4A6NDZ8 MIR3064-201ENST00000581130 66 ntBASIC0.39□□□□□ -2.35
MBD3L4A6NDZ8 MIR6755-201ENST00000619993 66 ntBASIC0.39□□□□□ -2.35
MBD3L4A6NDZ8 RNA5SP62-201ENST00000363457 110 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 SNORA2A-201ENST00000383885 135 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 RNU6-811P-201ENST00000384069 107 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 MIR548U-201ENST00000390728 81 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 AL157398.1-201ENST00000452981 186 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 RNA5SP484-201ENST00000458857 111 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 RNU6-1057P-201ENST00000517162 102 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 AC104996.3-201ENST00000590718 94 ntBASIC0.38□□□□□ -2.35
MBD3L4A6NDZ8 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 RNA5SP292-201ENST00000390974 118 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 RNU6-935P-201ENST00000410371 100 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 AC006210.1-201ENST00000424882 111 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 RNU6-844P-201ENST00000517175 102 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 NAMPTP3-201ENST00000569273 224 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 MIR4668-201ENST00000582284 70 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 SNORA70.25-201ENST00000612741 95 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 MIR2909-201ENST00000617113 69 ntBASIC0.37□□□□□ -2.35
MBD3L4A6NDZ8 RNU6-1298P-201ENST00000362456 101 ntBASIC0.36□□□□□ -2.35
MBD3L4A6NDZ8 Y_RNA.491-201ENST00000384417 107 ntBASIC0.36□□□□□ -2.35
MBD3L4A6NDZ8 SNORD116-22-201ENST00000384430 92 ntBASIC0.36□□□□□ -2.35
MBD3L4A6NDZ8 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
MBD3L4A6NDZ8 RNU1-141P-201ENST00000364623 158 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 MIR451A-201ENST00000385059 72 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 RNU6-402P-201ENST00000410678 103 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 AC093423.1-201ENST00000440817 142 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 SNORA18.5-201ENST00000516616 101 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 MIR5582-201ENST00000579697 68 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
MBD3L4A6NDZ8 SNORA9.1-201ENST00000362412 131 ntBASIC0.34□□□□□ -2.36
MBD3L4A6NDZ8 SNORD115-27-201ENST00000364430 82 ntBASIC0.34□□□□□ -2.36
MBD3L4A6NDZ8 Y_RNA.433-201ENST00000384089 102 ntBASIC0.34□□□□□ -2.36
MBD3L4A6NDZ8 Y_RNA.620-201ENST00000411009 88 ntBASIC0.34□□□□□ -2.36
MBD3L4A6NDZ8 RNA5SP170-201ENST00000517150 101 ntBASIC0.34□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-633P-201ENST00000362612 103 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-219P-201ENST00000364728 107 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-1134P-201ENST00000365156 101 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-815P-201ENST00000384080 113 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 SNORD110-201ENST00000408189 75 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 MIR1236-201ENST00000408340 102 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-267P-201ENST00000516714 103 ntBASIC0.33□□□□□ -2.36
MBD3L4A6NDZ8 Y_RNA.17-201ENST00000362433 111 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-1052P-201ENST00000411398 104 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 FGF7P7-201ENST00000514120 227 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-848P-201ENST00000515948 107 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-617P-201ENST00000516147 107 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-473P-201ENST00000516164 107 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU7-153P-201ENST00000516455 62 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-719P-201ENST00000516671 104 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 MIR4460-201ENST00000577862 86 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 U7.6-201ENST00000610841 64 ntBASIC0.32□□□□□ -2.36
MBD3L4A6NDZ8 RNA5SP128-201ENST00000365305 116 ntBASIC0.31□□□□□ -2.36
MBD3L4A6NDZ8 Y_RNA.369-201ENST00000365568 117 ntBASIC0.31□□□□□ -2.36
MBD3L4A6NDZ8 MIR519C-201ENST00000385053 87 ntBASIC0.31□□□□□ -2.36
MBD3L4A6NDZ8 SNORD90-201ENST00000391145 111 ntBASIC0.31□□□□□ -2.36
MBD3L4A6NDZ8 MIR5706-201ENST00000579841 80 ntBASIC0.31□□□□□ -2.36
MBD3L4A6NDZ8 MIR3140-201ENST00000583685 90 ntBASIC0.31□□□□□ -2.36
MBD3L4A6NDZ8 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
MBD3L4A6NDZ8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-294P-201ENST00000364999 102 ntBASIC0.3□□□□□ -2.36
MBD3L4A6NDZ8 RNA5SP63-201ENST00000391225 112 ntBASIC0.3□□□□□ -2.36
MBD3L4A6NDZ8 Y_RNA.593-201ENST00000410292 98 ntBASIC0.3□□□□□ -2.36
MBD3L4A6NDZ8 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
MBD3L4A6NDZ8 MIR4796-201ENST00000580742 81 ntBASIC0.3□□□□□ -2.36
MBD3L4A6NDZ8 SNORA63.2-201ENST00000362603 126 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-1051P-201ENST00000365471 102 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-675P-201ENST00000384236 104 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 Y_RNA.558-201ENST00000384685 113 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 MT-TY-201ENST00000387409 66 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 MIR216B-201ENST00000390186 82 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 U3.27-201ENST00000391237 200 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 YWHAEP2-201ENST00000580066 112 ntBASIC0.29□□□□□ -2.36
MBD3L4A6NDZ8 RNU6-497P-201ENST00000365316 104 ntBASIC0.28□□□□□ -2.36
MBD3L4A6NDZ8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.28□□□□□ -2.36
MBD3L4A6NDZ8 RNU5B-6P-201ENST00000516765 68 ntBASIC0.28□□□□□ -2.36
MBD3L4A6NDZ8 MIR548O2-201ENST00000616090 70 ntBASIC0.28□□□□□ -2.36
MBD3L4A6NDZ8 AC069503.3-201ENST00000618674 145 ntBASIC0.28□□□□□ -2.36
MBD3L4A6NDZ8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
MBD3L4A6NDZ8 HMGN2P22-201ENST00000427588 175 ntBASIC0.27□□□□□ -2.37
MBD3L4A6NDZ8 MIR548BB-201ENST00000626714 66 ntBASIC0.27□□□□□ -2.37
MBD3L4A6NDZ8 MIR499B-201ENST00000636498 73 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms