Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 AP002795.1-201ENST00000534879 84 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 AC113195.1-201ENST00000579952 141 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR6502-201ENST00000617296 76 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 AC139792.2-201ENST00000624218 587 ntBASIC-1.46□□□□□ -2.64
TRAV1-1A0A0B4J248 RNY4P27-201ENST00000363341 96 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORD50.2-201ENST00000365465 70 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 MIR203A-201ENST00000384836 110 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORD127-201ENST00000458892 86 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 RNU6-412P-201ENST00000516434 106 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 CYP3A54P-201ENST00000566950 75 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 AL442128.1-201ENST00000615151 90 ntBASIC-1.47□□□□□ -2.64
TRAV1-1A0A0B4J248 SNORA2.1-201ENST00000363089 137 ntBASIC-1.48□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.48□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.48□□□□□ -2.65
TRAV1-1A0A0B4J248 SNORD18B-201ENST00000365659 72 ntBASIC-1.48□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU7-24P-201ENST00000458867 62 ntBASIC-1.48□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.48□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR6844-201ENST00000637122 62 ntBASIC-1.48□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR335-201ENST00000362173 94 ntBASIC-1.49□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.49□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-382P-201ENST00000365181 106 ntBASIC-1.49□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.49□□□□□ -2.65
TRAV1-1A0A0B4J248 AL353691.2-201ENST00000443795 59 ntBASIC-1.49□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR3064-201ENST00000581130 66 ntBASIC-1.49□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR3658-201ENST00000636291 56 ntBASIC-1.49□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-151P-201ENST00000364158 107 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-164P-201ENST00000364604 103 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-409P-201ENST00000384114 104 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-80P-201ENST00000384195 107 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR548D2-201ENST00000384955 97 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 AC022028.1-201ENST00000412054 408 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 AC107027.2-201ENST00000512197 115 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.5□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 SNORD42.2-201ENST00000365570 69 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-260P-201ENST00000384092 107 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 AL078595.1-201ENST00000404458 226 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 RPL35AP4-201ENST00000412007 102 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 MTND1P19-201ENST00000511780 315 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR4770-201ENST00000579149 58 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 AL160413.1-201ENST00000622780 310 ntBASIC-1.51□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 RNY4P28-201ENST00000365281 93 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR519A2-201ENST00000384990 87 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR548P-201ENST00000408336 84 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 AL513043.2-201ENST00000573941 143 ntBASIC-1.52□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 SNORD19-201ENST00000391191 68 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-732P-201ENST00000516033 103 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 MIR548AG1-201ENST00000579932 66 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 AC104996.3-201ENST00000590718 94 ntBASIC-1.53□□□□□ -2.65
TRAV1-1A0A0B4J248 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 RNA5SP292-201ENST00000390974 118 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU7-88P-201ENST00000458752 63 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR3657-201ENST00000584818 117 ntBASIC-1.54□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-824P-201ENST00000363724 104 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-474P-201ENST00000384243 107 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR1263-201ENST00000408324 86 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR6509-201ENST00000614603 85 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR4773-1-201ENST00000637203 78 ntBASIC-1.55□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-774P-201ENST00000363238 107 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR548U-201ENST00000390728 81 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 AC090616.4-201ENST00000448026 115 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU6-518P-201ENST00000516056 96 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 RNU7-154P-201ENST00000516194 62 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR3646-201ENST00000578301 84 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR4680-201ENST00000580906 66 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 MIR5683-201ENST00000636514 76 ntBASIC-1.56□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.57□□□□□ -2.66
TRAV1-1A0A0B4J248 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms