Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PHF8Q9UPP1 RNA5SP160-201ENST00000364866 120 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 RN7SKP88-201ENST00000516847 250 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 MIR4303-201ENST00000581299 66 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 7SK.8-201ENST00000612110 250 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 7SK.11-201ENST00000615477 250 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 MIR8070-201ENST00000616510 88 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 uc_338.16-201ENST00000621804 95 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 7SK.13-201ENST00000622040 250 ntBASIC2.54□□□□□ -2
PHF8Q9UPP1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.54□□□□□ -2
PHF8Q9UPP1 RNU6-994P-201ENST00000410507 111 ntBASIC2.53□□□□□ -2
PHF8Q9UPP1 SNORA31.14-201ENST00000516728 116 ntBASIC2.53□□□□□ -2
PHF8Q9UPP1 NAMPTP3-201ENST00000569273 224 ntBASIC2.53□□□□□ -2
PHF8Q9UPP1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
PHF8Q9UPP1 RNU6-369P-201ENST00000362515 102 ntBASIC2.52□□□□□ -2.01
PHF8Q9UPP1 SNORA25.5-201ENST00000363782 126 ntBASIC2.52□□□□□ -2.01
PHF8Q9UPP1 MIR7-2-201ENST00000384970 110 ntBASIC2.52□□□□□ -2.01
PHF8Q9UPP1 RNU7-21P-201ENST00000459430 62 ntBASIC2.52□□□□□ -2.01
PHF8Q9UPP1 MIR4255-201ENST00000579351 72 ntBASIC2.52□□□□□ -2.01
PHF8Q9UPP1 Y_RNA.32-201ENST00000362589 110 ntBASIC2.51□□□□□ -2.01
PHF8Q9UPP1 RNU6-940P-201ENST00000363433 104 ntBASIC2.51□□□□□ -2.01
PHF8Q9UPP1 RNU6-1335P-201ENST00000365426 107 ntBASIC2.51□□□□□ -2.01
PHF8Q9UPP1 SNORA80D-201ENST00000384488 135 ntBASIC2.51□□□□□ -2.01
PHF8Q9UPP1 RNU7-161P-201ENST00000517289 62 ntBASIC2.51□□□□□ -2.01
PHF8Q9UPP1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PHF8Q9UPP1 RNU6-829P-201ENST00000363700 112 ntBASIC2.5□□□□□ -2.01
PHF8Q9UPP1 SNORA67.5-201ENST00000391036 107 ntBASIC2.5□□□□□ -2.01
PHF8Q9UPP1 AC067940.1-201ENST00000458411 300 ntBASIC2.5□□□□□ -2.01
PHF8Q9UPP1 TRMT112P2-201ENST00000512910 132 ntBASIC2.5□□□□□ -2.01
PHF8Q9UPP1 MIR3198-2-201ENST00000577868 80 ntBASIC2.5□□□□□ -2.01
PHF8Q9UPP1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PHF8Q9UPP1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PHF8Q9UPP1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PHF8Q9UPP1 Y_RNA.236-201ENST00000364427 111 ntBASIC2.49□□□□□ -2.01
PHF8Q9UPP1 Y_RNA.363-201ENST00000365529 113 ntBASIC2.49□□□□□ -2.01
PHF8Q9UPP1 MIR100-201ENST00000385259 80 ntBASIC2.49□□□□□ -2.01
PHF8Q9UPP1 RNU7-90P-201ENST00000459216 62 ntBASIC2.49□□□□□ -2.01
PHF8Q9UPP1 MIR3657-201ENST00000584818 117 ntBASIC2.49□□□□□ -2.01
PHF8Q9UPP1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PHF8Q9UPP1 MIR1-1-201ENST00000362147 71 ntBASIC2.48□□□□□ -2.01
PHF8Q9UPP1 RNU6-645P-201ENST00000364649 106 ntBASIC2.48□□□□□ -2.01
PHF8Q9UPP1 MIR203A-201ENST00000384836 110 ntBASIC2.48□□□□□ -2.01
PHF8Q9UPP1 RNA5SP233-201ENST00000459153 113 ntBASIC2.48□□□□□ -2.01
PHF8Q9UPP1 AC025033.1-201ENST00000463883 194 ntBASIC2.48□□□□□ -2.01
PHF8Q9UPP1 RNU6-260P-201ENST00000384092 107 ntBASIC2.47□□□□□ -2.01
PHF8Q9UPP1 MIR499A-201ENST00000384903 122 ntBASIC2.47□□□□□ -2.01
PHF8Q9UPP1 MIR17-201ENST00000385012 84 ntBASIC2.47□□□□□ -2.01
PHF8Q9UPP1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF8Q9UPP1 RNU7-74P-201ENST00000459104 62 ntBASIC2.47□□□□□ -2.01
PHF8Q9UPP1 RNU7-104P-201ENST00000459398 79 ntBASIC2.47□□□□□ -2.01
PHF8Q9UPP1 MIR466-201ENST00000580653 84 ntBASIC2.47□□□□□ -2.01
PHF8Q9UPP1 MIR519E-201ENST00000385075 84 ntBASIC2.46□□□□□ -2.02
PHF8Q9UPP1 RNU1-78P-201ENST00000391248 165 ntBASIC2.46□□□□□ -2.02
PHF8Q9UPP1 SCARNA21.1-201ENST00000515996 128 ntBASIC2.46□□□□□ -2.02
PHF8Q9UPP1 AC067863.3-201ENST00000624172 122 ntBASIC2.46□□□□□ -2.02
PHF8Q9UPP1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PHF8Q9UPP1 RNA5SP215-201ENST00000363440 122 ntBASIC2.45□□□□□ -2.02
PHF8Q9UPP1 MIR934-201ENST00000401241 83 ntBASIC2.45□□□□□ -2.02
PHF8Q9UPP1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.45□□□□□ -2.02
PHF8Q9UPP1 MIR4448-201ENST00000584360 86 ntBASIC2.45□□□□□ -2.02
PHF8Q9UPP1 AL157834.3-201ENST00000615543 103 ntBASIC2.45□□□□□ -2.02
PHF8Q9UPP1 RNU6-1079P-201ENST00000362861 110 ntBASIC2.44□□□□□ -2.02
PHF8Q9UPP1 RNA5SP192-201ENST00000364404 120 ntBASIC2.44□□□□□ -2.02
PHF8Q9UPP1 RNU6-54P-201ENST00000365563 107 ntBASIC2.44□□□□□ -2.02
PHF8Q9UPP1 MIR4422-201ENST00000581938 83 ntBASIC2.44□□□□□ -2.02
PHF8Q9UPP1 SNORA2.1-201ENST00000363089 137 ntBASIC2.43□□□□□ -2.02
PHF8Q9UPP1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.43□□□□□ -2.02
PHF8Q9UPP1 RNU4-52P-201ENST00000384209 138 ntBASIC2.43□□□□□ -2.02
PHF8Q9UPP1 MIR520F-201ENST00000384824 87 ntBASIC2.43□□□□□ -2.02
PHF8Q9UPP1 RNU7-95P-201ENST00000459222 64 ntBASIC2.43□□□□□ -2.02
PHF8Q9UPP1 RNU6-135P-201ENST00000516769 101 ntBASIC2.43□□□□□ -2.02
PHF8Q9UPP1 AL356379.1-201ENST00000414105 126 ntBASIC2.42□□□□□ -2.02
PHF8Q9UPP1 MIR502-201ENST00000606349 86 ntBASIC2.42□□□□□ -2.02
PHF8Q9UPP1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PHF8Q9UPP1 Y_RNA.118-201ENST00000363300 101 ntBASIC2.41□□□□□ -2.02
PHF8Q9UPP1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PHF8Q9UPP1 RNU1-123P-201ENST00000458950 160 ntBASIC2.41□□□□□ -2.02
PHF8Q9UPP1 RNU6-910P-201ENST00000390844 107 ntBASIC2.4□□□□□ -2.03
PHF8Q9UPP1 SNORD79.1-201ENST00000516069 84 ntBASIC2.4□□□□□ -2.03
PHF8Q9UPP1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.4□□□□□ -2.03
PHF8Q9UPP1 RNU6V-201ENST00000384105 107 ntBASIC2.39□□□□□ -2.03
PHF8Q9UPP1 RNA5SP299-201ENST00000391203 116 ntBASIC2.39□□□□□ -2.03
PHF8Q9UPP1 RNU1-40P-201ENST00000516816 164 ntBASIC2.39□□□□□ -2.03
PHF8Q9UPP1 RNU1-97P-201ENST00000516872 164 ntBASIC2.39□□□□□ -2.03
PHF8Q9UPP1 RNU6-302P-201ENST00000365249 107 ntBASIC2.38□□□□□ -2.03
PHF8Q9UPP1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PHF8Q9UPP1 MIR1827-201ENST00000408549 66 ntBASIC2.38□□□□□ -2.03
PHF8Q9UPP1 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
PHF8Q9UPP1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PHF8Q9UPP1 SNORA16.1-201ENST00000364597 132 ntBASIC2.37□□□□□ -2.03
PHF8Q9UPP1 SNORD42B-201ENST00000458893 67 ntBASIC2.37□□□□□ -2.03
PHF8Q9UPP1 BX248123.2-201ENST00000606318 124 ntBASIC2.37□□□□□ -2.03
PHF8Q9UPP1 SUMO2P12-201ENST00000405924 140 ntBASIC2.36□□□□□ -2.03
PHF8Q9UPP1 RNU6-717P-201ENST00000459076 104 ntBASIC2.36□□□□□ -2.03
PHF8Q9UPP1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.36□□□□□ -2.03
PHF8Q9UPP1 MIR6739-201ENST00000622461 75 ntBASIC2.36□□□□□ -2.03
PHF8Q9UPP1 RNU6-902P-201ENST00000517212 91 ntBASIC2.35□□□□□ -2.03
PHF8Q9UPP1 RMST_2.1-201ENST00000617263 136 ntBASIC2.35□□□□□ -2.03
PHF8Q9UPP1 Y_RNA.250-201ENST00000364542 110 ntBASIC2.34□□□□□ -2.03
PHF8Q9UPP1 RNA5SP117-201ENST00000365294 118 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms