Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-3.07□□□□□ -2.9
SCN11AQ9UI33 MIR1321-201ENST00000637766 79 ntBASIC-3.07□□□□□ -2.9
SCN11AQ9UI33 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.07□□□□□ -2.9
SCN11AQ9UI33 Y_RNA.594-201ENST00000410373 140 ntBASIC-3.07□□□□□ -2.9
SCN11AQ9UI33 Y_RNA.713-201ENST00000517013 96 ntBASIC-3.07□□□□□ -2.9
SCN11AQ9UI33 AP003461.1-201ENST00000528866 78 ntBASIC-3.07□□□□□ -2.9
SCN11AQ9UI33 MTATP6P25-201ENST00000574491 261 ntBASIC-3.07□□□□□ -2.9
SCN11AQ9UI33 Y_RNA.169-201ENST00000363745 96 ntBASIC-3.08□□□□□ -2.9
SCN11AQ9UI33 RNU6-643P-201ENST00000384018 107 ntBASIC-3.08□□□□□ -2.9
SCN11AQ9UI33 Y_RNA.418-201ENST00000384029 102 ntBASIC-3.08□□□□□ -2.9
SCN11AQ9UI33 RNU6-1068P-201ENST00000410958 103 ntBASIC-3.08□□□□□ -2.9
SCN11AQ9UI33 RNU7-169P-201ENST00000459456 61 ntBASIC-3.08□□□□□ -2.9
SCN11AQ9UI33 MIR3170-201ENST00000582699 77 ntBASIC-3.08□□□□□ -2.9
SCN11AQ9UI33 U6.97-201ENST00000636904 101 ntBASIC-3.08□□□□□ -2.9
SCN11AQ9UI33 RNU6-1313P-201ENST00000362622 102 ntBASIC-3.09□□□□□ -2.9
SCN11AQ9UI33 RNU6-824P-201ENST00000363724 104 ntBASIC-3.09□□□□□ -2.9
SCN11AQ9UI33 RNU6-694P-201ENST00000364071 147 ntBASIC-3.09□□□□□ -2.9
SCN11AQ9UI33 RNU6-141P-201ENST00000410499 105 ntBASIC-3.09□□□□□ -2.9
SCN11AQ9UI33 MTND4LP30-201ENST00000454092 297 ntBASIC-3.09□□□□□ -2.9
SCN11AQ9UI33 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.09□□□□□ -2.9
SCN11AQ9UI33 snoU18.1-201ENST00000629629 71 ntBASIC-3.09□□□□□ -2.9
SCN11AQ9UI33 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 SNORD60-201ENST00000383903 83 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 RNU6-976P-201ENST00000516086 111 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 RNU6-807P-201ENST00000516805 107 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 RNU6-230P-201ENST00000362457 104 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.605-201ENST00000410577 105 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 RNU7-85P-201ENST00000458851 63 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 DLEU2_2.2-201ENST00000615474 90 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 U2.1-201ENST00000618978 145 ntBASIC-3.1□□□□□ -2.91
SCN11AQ9UI33 RNU6-561P-201ENST00000516222 102 ntBASIC-3.11□□□□□ -2.91
SCN11AQ9UI33 RNU6-1090P-201ENST00000364065 94 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.682-201ENST00000516457 100 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 AL442128.1-201ENST00000615151 90 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.201-201ENST00000364052 96 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.473-201ENST00000384333 102 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 RNU6-906P-201ENST00000384700 70 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 RNU6-656P-201ENST00000516785 107 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 RNU6-264P-201ENST00000517134 104 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 AC021753.1-201ENST00000635724 168 ntBASIC-3.12□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.217-201ENST00000364214 105 ntBASIC-3.13□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.615-201ENST00000410769 117 ntBASIC-3.13□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.641-201ENST00000459414 105 ntBASIC-3.13□□□□□ -2.91
SCN11AQ9UI33 RNU6-1281P-201ENST00000516223 105 ntBASIC-3.13□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.708-201ENST00000516950 96 ntBASIC-3.13□□□□□ -2.91
SCN11AQ9UI33 UBE2WP1-201ENST00000362030 340 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 RNU6-1214P-201ENST00000363650 109 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 RNU1-115P-201ENST00000365329 160 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.560-201ENST00000384689 102 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 U8.20-201ENST00000459445 131 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 MIR3646-201ENST00000578301 84 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 U2.7-201ENST00000619197 100 ntBASIC-3.14□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.143-201ENST00000363520 106 ntBASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 RNY1P1-201ENST00000364372 112 ntBASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 MIR4773-1-201ENST00000637203 78 ntBASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 RNU6-1272P-201ENST00000362776 107 ntBASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 AC107308.1-201ENST00000615897 301 ntBASIC-3.15□□□□□ -2.91
SCN11AQ9UI33 Y_RNA.152-201ENST00000363578 100 ntBASIC-3.16□□□□□ -2.92
SCN11AQ9UI33 RNU6-937P-201ENST00000384325 106 ntBASIC-3.16□□□□□ -2.92
SCN11AQ9UI33 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.16□□□□□ -2.92
SCN11AQ9UI33 RNU7-4P-201ENST00000516961 62 ntBASIC-3.16□□□□□ -2.92
SCN11AQ9UI33 RNU6-835P-201ENST00000516974 104 ntBASIC-3.16□□□□□ -2.92
SCN11AQ9UI33 RNU6-247P-201ENST00000362636 107 ntBASIC-3.17□□□□□ -2.92
SCN11AQ9UI33 RNU6-363P-201ENST00000362895 105 ntBASIC-3.17□□□□□ -2.92
SCN11AQ9UI33 RNU6-120P-201ENST00000516077 103 ntBASIC-3.17□□□□□ -2.92
SCN11AQ9UI33 RNU6-1016P-201ENST00000516689 94 ntBASIC-3.17□□□□□ -2.92
SCN11AQ9UI33 RNU7-6P-201ENST00000516845 62 ntBASIC-3.17□□□□□ -2.92
SCN11AQ9UI33 MIR3064-201ENST00000581130 66 ntBASIC-3.17□□□□□ -2.92
SCN11AQ9UI33 MIR379-201ENST00000362218 67 ntBASIC-3.18□□□□□ -2.92
SCN11AQ9UI33 Y_RNA.296-201ENST00000364930 108 ntBASIC-3.18□□□□□ -2.92
SCN11AQ9UI33 RNU6-995P-201ENST00000391244 107 ntBASIC-3.18□□□□□ -2.92
SCN11AQ9UI33 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.18□□□□□ -2.92
SCN11AQ9UI33 Z69908.1-201ENST00000622603 247 ntBASIC-3.18□□□□□ -2.92
SCN11AQ9UI33 MIR628-201ENST00000385229 95 ntBASIC-3.19□□□□□ -2.92
SCN11AQ9UI33 RNY4P25-201ENST00000459254 96 ntBASIC-3.19□□□□□ -2.92
SCN11AQ9UI33 MIR1255B1-201ENST00000636325 63 ntBASIC-3.19□□□□□ -2.92
SCN11AQ9UI33 RNU6-151P-201ENST00000364158 107 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 SEPT14P3-201ENST00000439401 183 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 AL732372.2-207ENST00000445840 183 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 SEPT14P2-201ENST00000453405 183 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 MTND2P14-201ENST00000482139 351 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 FO082796.1-201ENST00000523795 183 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 RNU4-90P-201ENST00000362773 141 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 MTND3P2-201ENST00000438452 342 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 MIR4528-201ENST00000577763 90 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 AL162413.1-201ENST00000603198 110 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 AC012531.4-201ENST00000616509 177 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 AC025521.1-201ENST00000621624 286 ntBASIC-3.2□□□□□ -2.92
SCN11AQ9UI33 snoU2_19.4-201ENST00000364329 80 ntBASIC-3.21□□□□□ -2.92
SCN11AQ9UI33 Y_RNA.286-201ENST00000364813 102 ntBASIC-3.21□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms