Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 SNORD115-22-201ENST00000364456 82 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 SNORD113.3-201ENST00000364630 78 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 Y_RNA.330-201ENST00000365230 109 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 RNY4P3-201ENST00000365254 95 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 MIR9-2-201ENST00000384838 87 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 MIR451A-201ENST00000385059 72 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 SNORA75.2-201ENST00000391138 150 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 SNORA75.3-201ENST00000391231 150 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 MIR3660-201ENST00000584845 100 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.76□□□□□ -2.13
ATG3Q9NT62 Y_RNA.258-201ENST00000364613 105 ntBASIC1.75□□□□□ -2.13
ATG3Q9NT62 Y_RNA.363-201ENST00000365529 113 ntBASIC1.75□□□□□ -2.13
ATG3Q9NT62 RNU6-935P-201ENST00000410371 100 ntBASIC1.75□□□□□ -2.13
ATG3Q9NT62 AL512310.8-201ENST00000550183 120 ntBASIC1.75□□□□□ -2.13
ATG3Q9NT62 AC138907.6-201ENST00000568401 126 ntBASIC1.75□□□□□ -2.13
ATG3Q9NT62 AC138869.1-201ENST00000568623 124 ntBASIC1.75□□□□□ -2.13
ATG3Q9NT62 RNU6-630P-201ENST00000391258 106 ntBASIC1.74□□□□□ -2.13
ATG3Q9NT62 RNU7-40P-201ENST00000516397 64 ntBASIC1.74□□□□□ -2.13
ATG3Q9NT62 MIR6078-201ENST00000611069 100 ntBASIC1.74□□□□□ -2.13
ATG3Q9NT62 RMST_2.1-201ENST00000617263 136 ntBASIC1.74□□□□□ -2.13
ATG3Q9NT62 RNU6-369P-201ENST00000362515 102 ntBASIC1.73□□□□□ -2.13
ATG3Q9NT62 SNORD45.1-201ENST00000363181 77 ntBASIC1.73□□□□□ -2.13
ATG3Q9NT62 RNU6-681P-201ENST00000364012 104 ntBASIC1.72□□□□□ -2.13
ATG3Q9NT62 RNU1-93P-201ENST00000364704 169 ntBASIC1.72□□□□□ -2.13
ATG3Q9NT62 SNORD116-24-201ENST00000384549 92 ntBASIC1.72□□□□□ -2.13
ATG3Q9NT62 RNU6-535P-201ENST00000384722 107 ntBASIC1.72□□□□□ -2.13
ATG3Q9NT62 SNORA40.6-201ENST00000391153 128 ntBASIC1.72□□□□□ -2.13
ATG3Q9NT62 AC023827.1-201ENST00000569247 97 ntBASIC1.72□□□□□ -2.13
ATG3Q9NT62 MIR4676-201ENST00000583078 72 ntBASIC1.72□□□□□ -2.13
ATG3Q9NT62 RPS26P5-201ENST00000418544 335 ntBASIC1.71□□□□□ -2.14
ATG3Q9NT62 RNU6-287P-201ENST00000516230 98 ntBASIC1.71□□□□□ -2.14
ATG3Q9NT62 AC008608.1-201ENST00000603910 127 ntBASIC1.71□□□□□ -2.14
ATG3Q9NT62 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ATG3Q9NT62 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.7□□□□□ -2.14
ATG3Q9NT62 RNU6-881P-201ENST00000516813 102 ntBASIC1.7□□□□□ -2.14
ATG3Q9NT62 RNU6-382P-201ENST00000365181 106 ntBASIC1.69□□□□□ -2.14
ATG3Q9NT62 Y_RNA.443-201ENST00000384135 111 ntBASIC1.69□□□□□ -2.14
ATG3Q9NT62 Y_RNA.540-201ENST00000384638 111 ntBASIC1.69□□□□□ -2.14
ATG3Q9NT62 RNU6-604P-201ENST00000390917 100 ntBASIC1.69□□□□□ -2.14
ATG3Q9NT62 RNU6-1177P-201ENST00000391058 104 ntBASIC1.69□□□□□ -2.14
ATG3Q9NT62 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
ATG3Q9NT62 AC106800.4-201ENST00000614905 153 ntBASIC1.69□□□□□ -2.14
ATG3Q9NT62 MIR4773-1-201ENST00000637203 78 ntBASIC1.69□□□□□ -2.14
ATG3Q9NT62 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
ATG3Q9NT62 SNORD113.1-201ENST00000363280 73 ntBASIC1.68□□□□□ -2.14
ATG3Q9NT62 RNU6-895P-201ENST00000384125 103 ntBASIC1.68□□□□□ -2.14
ATG3Q9NT62 AC244505.6-201ENST00000452829 130 ntBASIC1.68□□□□□ -2.14
ATG3Q9NT62 RNU7-102P-201ENST00000458948 62 ntBASIC1.68□□□□□ -2.14
ATG3Q9NT62 SNORA31.2-201ENST00000516019 134 ntBASIC1.68□□□□□ -2.14
ATG3Q9NT62 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ATG3Q9NT62 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 MIR548AG2-201ENST00000581228 64 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 MIR7974-201ENST00000615835 79 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 AL109933.3-201ENST00000619095 188 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 AC027335.2-201ENST00000624030 375 ntBASIC1.67□□□□□ -2.14
ATG3Q9NT62 RNU6-42P-201ENST00000384165 107 ntBASIC1.66□□□□□ -2.14
ATG3Q9NT62 RNU6-364P-201ENST00000384387 107 ntBASIC1.66□□□□□ -2.14
ATG3Q9NT62 SNORD111-201ENST00000408139 94 ntBASIC1.66□□□□□ -2.14
ATG3Q9NT62 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
ATG3Q9NT62 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.66□□□□□ -2.14
ATG3Q9NT62 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.66□□□□□ -2.14
ATG3Q9NT62 SNORA25.4-201ENST00000363666 124 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 SNORD114-27-201ENST00000363766 70 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 SNORD26-201ENST00000384147 75 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 MIR938-201ENST00000401216 83 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 AC093423.1-201ENST00000440817 142 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 MIR4804-201ENST00000581683 73 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 MIR8053-201ENST00000613344 75 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 MIR6767-201ENST00000637302 66 ntBASIC1.65□□□□□ -2.15
ATG3Q9NT62 MIR520E-201ENST00000384867 87 ntBASIC1.64□□□□□ -2.15
ATG3Q9NT62 RNU7-56P-201ENST00000458744 62 ntBASIC1.64□□□□□ -2.15
ATG3Q9NT62 RNU7-21P-201ENST00000459430 62 ntBASIC1.64□□□□□ -2.15
ATG3Q9NT62 Y_RNA.32-201ENST00000362589 110 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 RNU6-1216P-201ENST00000362590 107 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 MIR758-201ENST00000390227 88 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 MTND4LP19-201ENST00000403051 166 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 RNU6-982P-201ENST00000516216 102 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 RNA5SP220-201ENST00000516298 104 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 SNORA31.14-201ENST00000516728 116 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 AL078603.1-201ENST00000603824 313 ntBASIC1.63□□□□□ -2.15
ATG3Q9NT62 MIR150-201ENST00000385048 84 ntBASIC1.62□□□□□ -2.15
ATG3Q9NT62 U3.27-201ENST00000391237 200 ntBASIC1.62□□□□□ -2.15
ATG3Q9NT62 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
ATG3Q9NT62 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
ATG3Q9NT62 RNU6-1057P-201ENST00000517162 102 ntBASIC1.62□□□□□ -2.15
ATG3Q9NT62 AC022709.1-201ENST00000615967 87 ntBASIC1.62□□□□□ -2.15
ATG3Q9NT62 uc_338.16-201ENST00000621804 95 ntBASIC1.62□□□□□ -2.15
ATG3Q9NT62 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
ATG3Q9NT62 AC244098.3-201ENST00000424803 96 ntBASIC1.61□□□□□ -2.15
ATG3Q9NT62 RNU7-161P-201ENST00000517289 62 ntBASIC1.61□□□□□ -2.15
ATG3Q9NT62 MIR3920-201ENST00000581751 86 ntBASIC1.61□□□□□ -2.15
ATG3Q9NT62 RNA5SP403-201ENST00000363598 108 ntBASIC1.6□□□□□ -2.15
ATG3Q9NT62 RNU6-1126P-201ENST00000384002 107 ntBASIC1.6□□□□□ -2.15
ATG3Q9NT62 AL591704.2-201ENST00000421658 181 ntBASIC1.6□□□□□ -2.15
ATG3Q9NT62 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.6□□□□□ -2.15
ATG3Q9NT62 RNU6-274P-201ENST00000459566 107 ntBASIC1.6□□□□□ -2.15
ATG3Q9NT62 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms