Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 SNORD99-201ENST00000408612 74 ntBASIC0.91□□□□□ -2.26
HAPLN3Q96S86 RNU7-161P-201ENST00000517289 62 ntBASIC0.91□□□□□ -2.26
HAPLN3Q96S86 MIR3612-201ENST00000579753 87 ntBASIC0.91□□□□□ -2.26
HAPLN3Q96S86 MIR3064-201ENST00000581130 66 ntBASIC0.91□□□□□ -2.26
HAPLN3Q96S86 MTRNR2L2-201ENST00000604882 87 ntBASIC0.91□□□□□ -2.26
HAPLN3Q96S86 PVT1_3.1-201ENST00000620853 95 ntBASIC0.91□□□□□ -2.26
HAPLN3Q96S86 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 RNA5SP403-201ENST00000363598 108 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 RNA5SP117-201ENST00000365294 118 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 RNU6-1276P-201ENST00000365372 104 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 RNU7-171P-201ENST00000459581 62 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
HAPLN3Q96S86 SNORD115-24-201ENST00000363528 82 ntBASIC0.89□□□□□ -2.27
HAPLN3Q96S86 MIR1236-201ENST00000408340 102 ntBASIC0.89□□□□□ -2.27
HAPLN3Q96S86 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
HAPLN3Q96S86 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
HAPLN3Q96S86 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
HAPLN3Q96S86 SNORA18.5-201ENST00000516616 101 ntBASIC0.89□□□□□ -2.27
HAPLN3Q96S86 MIR4696-201ENST00000581431 70 ntBASIC0.89□□□□□ -2.27
HAPLN3Q96S86 MIR1245B-201ENST00000636115 69 ntBASIC0.89□□□□□ -2.27
HAPLN3Q96S86 RNU6-811P-201ENST00000384069 107 ntBASIC0.88□□□□□ -2.27
HAPLN3Q96S86 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
HAPLN3Q96S86 SNORD90-201ENST00000391145 111 ntBASIC0.88□□□□□ -2.27
HAPLN3Q96S86 AC093729.1-201ENST00000513074 128 ntBASIC0.88□□□□□ -2.27
HAPLN3Q96S86 AC011195.1-201ENST00000578177 177 ntBASIC0.88□□□□□ -2.27
HAPLN3Q96S86 MIR3678-201ENST00000578455 94 ntBASIC0.88□□□□□ -2.27
HAPLN3Q96S86 AC104996.3-201ENST00000590718 94 ntBASIC0.88□□□□□ -2.27
HAPLN3Q96S86 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HAPLN3Q96S86 RNU6-664P-201ENST00000362381 107 ntBASIC0.87□□□□□ -2.27
HAPLN3Q96S86 SNORD28-201ENST00000384706 75 ntBASIC0.87□□□□□ -2.27
HAPLN3Q96S86 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
HAPLN3Q96S86 AC140658.3-201ENST00000567603 271 ntBASIC0.87□□□□□ -2.27
HAPLN3Q96S86 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HAPLN3Q96S86 SNORD18A-201ENST00000363753 72 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 Y_RNA.426-201ENST00000384068 113 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 RNU6-242P-201ENST00000384359 107 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 Y_RNA.596-201ENST00000410462 109 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.86□□□□□ -2.27
HAPLN3Q96S86 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 SNORA25.13-201ENST00000516395 103 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 MIR4666B-201ENST00000578142 81 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 MIR3920-201ENST00000581751 86 ntBASIC0.86□□□□□ -2.27
HAPLN3Q96S86 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 SNORD101-201ENST00000384027 73 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 Y_RNA.491-201ENST00000384417 107 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
HAPLN3Q96S86 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HAPLN3Q96S86 RNA5SP436-201ENST00000516020 115 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 MIR4796-201ENST00000580742 81 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 MIR6779-201ENST00000617283 64 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
HAPLN3Q96S86 RNU6-228P-201ENST00000362700 106 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 Y_RNA.207-201ENST00000364142 106 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 Y_RNA.219-201ENST00000364232 113 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 Y_RNA.313-201ENST00000365095 103 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 MIR548U-201ENST00000390728 81 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 RNU6-287P-201ENST00000516230 98 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 RNA5SP47-201ENST00000517230 109 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.84□□□□□ -2.27
HAPLN3Q96S86 MIR548AG2-201ENST00000581228 64 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 MIR4639-201ENST00000584938 69 ntBASIC0.84□□□□□ -2.27
HAPLN3Q96S86 Y_RNA.607-201ENST00000410597 98 ntBASIC0.83□□□□□ -2.28
HAPLN3Q96S86 RNU7-104P-201ENST00000459398 79 ntBASIC0.83□□□□□ -2.28
HAPLN3Q96S86 RNU6-624P-201ENST00000363411 107 ntBASIC0.82□□□□□ -2.28
HAPLN3Q96S86 Y_RNA.437-201ENST00000384113 113 ntBASIC0.82□□□□□ -2.28
HAPLN3Q96S86 RNU6-1124P-201ENST00000384169 107 ntBASIC0.82□□□□□ -2.28
HAPLN3Q96S86 SNORD78.1-201ENST00000390866 65 ntBASIC0.82□□□□□ -2.28
HAPLN3Q96S86 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
HAPLN3Q96S86 SNORD115-37-201ENST00000363768 82 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 Y_RNA.239-201ENST00000364444 113 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 Y_RNA.316-201ENST00000365118 111 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 RNU6-652P-201ENST00000365488 107 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 MIR216A-201ENST00000385063 110 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 RNU6-469P-201ENST00000516253 101 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 RNU7-13P-201ENST00000516413 62 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 RNU6-135P-201ENST00000516769 101 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 RN7SL793P-201ENST00000583259 296 ntBASIC0.81□□□□□ -2.28
HAPLN3Q96S86 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
HAPLN3Q96S86 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 RNY1P8-201ENST00000383970 114 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 RNU6-1126P-201ENST00000384002 107 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 MIR1255A-201ENST00000408338 113 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 RNA5SP222-201ENST00000411039 105 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 AL450471.1-201ENST00000447509 127 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 MIR2113-201ENST00000459007 91 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 RNA5SP395-201ENST00000516567 118 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 MIR3140-201ENST00000583685 90 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 AC067863.3-201ENST00000624172 122 ntBASIC0.8□□□□□ -2.28
HAPLN3Q96S86 RNA5SP325-201ENST00000363756 130 ntBASIC0.79□□□□□ -2.28
HAPLN3Q96S86 RNU6-478P-201ENST00000363904 110 ntBASIC0.79□□□□□ -2.28
HAPLN3Q96S86 RNU6-726P-201ENST00000364680 107 ntBASIC0.79□□□□□ -2.28
HAPLN3Q96S86 RNU6-1051P-201ENST00000365471 102 ntBASIC0.79□□□□□ -2.28
HAPLN3Q96S86 RNU6-1275P-201ENST00000391087 107 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms