Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL356379.1-201ENST00000414105 126 ntBASIC2.22□□□□□ -2.05
TRIM47Q96LD4 SNORA40.17-201ENST00000517256 115 ntBASIC2.22□□□□□ -2.05
TRIM47Q96LD4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.22□□□□□ -2.05
TRIM47Q96LD4 MIR6739-201ENST00000622461 75 ntBASIC2.22□□□□□ -2.05
TRIM47Q96LD4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM47Q96LD4 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
TRIM47Q96LD4 SNORD42B-201ENST00000458893 67 ntBASIC2.21□□□□□ -2.06
TRIM47Q96LD4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.21□□□□□ -2.06
TRIM47Q96LD4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
TRIM47Q96LD4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM47Q96LD4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
TRIM47Q96LD4 RNU6-990P-201ENST00000364385 104 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 RNU6-934P-201ENST00000365154 107 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 MIR489-201ENST00000384923 84 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TRIM47Q96LD4 RNU6-930P-201ENST00000390938 100 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 RNA5SP450-201ENST00000411206 102 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 JTBP1-201ENST00000441314 247 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 MIR4771-2-201ENST00000577758 74 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 MIR4771-1-201ENST00000582617 74 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 MIR8081-201ENST00000611533 95 ntBASIC2.2□□□□□ -2.06
TRIM47Q96LD4 AL157398.1-201ENST00000452981 186 ntBASIC2.19□□□□□ -2.06
TRIM47Q96LD4 RNA5SP233-201ENST00000459153 113 ntBASIC2.19□□□□□ -2.06
TRIM47Q96LD4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM47Q96LD4 AC084768.2-201ENST00000622736 221 ntBASIC2.19□□□□□ -2.06
TRIM47Q96LD4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM47Q96LD4 MIR9-3-201ENST00000385084 90 ntBASIC2.18□□□□□ -2.06
TRIM47Q96LD4 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
TRIM47Q96LD4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM47Q96LD4 MIR617-201ENST00000385030 97 ntBASIC2.17□□□□□ -2.06
TRIM47Q96LD4 SNORA67.5-201ENST00000391036 107 ntBASIC2.17□□□□□ -2.06
TRIM47Q96LD4 SNORD113-2-201ENST00000391082 72 ntBASIC2.17□□□□□ -2.06
TRIM47Q96LD4 AC067940.1-201ENST00000458411 300 ntBASIC2.17□□□□□ -2.06
TRIM47Q96LD4 snoU13.18-201ENST00000459483 104 ntBASIC2.17□□□□□ -2.06
TRIM47Q96LD4 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
TRIM47Q96LD4 MIR4303-201ENST00000581299 66 ntBASIC2.17□□□□□ -2.06
TRIM47Q96LD4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM47Q96LD4 RNU6V-201ENST00000384105 107 ntBASIC2.16□□□□□ -2.06
TRIM47Q96LD4 RNU6-439P-201ENST00000384188 106 ntBASIC2.16□□□□□ -2.06
TRIM47Q96LD4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM47Q96LD4 RNA5SP403-201ENST00000363598 108 ntBASIC2.15□□□□□ -2.07
TRIM47Q96LD4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM47Q96LD4 SNORD115-24-201ENST00000363528 82 ntBASIC2.14□□□□□ -2.07
TRIM47Q96LD4 RNU6-364P-201ENST00000384387 107 ntBASIC2.14□□□□□ -2.07
TRIM47Q96LD4 MIR519E-201ENST00000385075 84 ntBASIC2.14□□□□□ -2.07
TRIM47Q96LD4 RNU7-119P-201ENST00000459279 63 ntBASIC2.14□□□□□ -2.07
TRIM47Q96LD4 RNU6-698P-201ENST00000363523 107 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 RNU4-33P-201ENST00000364316 85 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 RNU6-34P-201ENST00000364874 107 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 Y_RNA.330-201ENST00000365230 109 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 RNU6-1162P-201ENST00000384443 104 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 MIR517B-201ENST00000385102 67 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 U4.4-201ENST00000620626 117 ntBASIC2.13□□□□□ -2.07
TRIM47Q96LD4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM47Q96LD4 RNA5SP276-201ENST00000362580 94 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 SNORD113.3-201ENST00000364630 78 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 MIR548F3-201ENST00000408509 87 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 RNU7-174P-201ENST00000516248 59 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 RNU7-161P-201ENST00000517289 62 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 AC018659.1-201ENST00000551083 169 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 MIR4676-201ENST00000583078 72 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 BX248123.2-201ENST00000606318 124 ntBASIC2.12□□□□□ -2.07
TRIM47Q96LD4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM47Q96LD4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TRIM47Q96LD4 RNU7-104P-201ENST00000459398 79 ntBASIC2.11□□□□□ -2.07
TRIM47Q96LD4 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
TRIM47Q96LD4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
TRIM47Q96LD4 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
TRIM47Q96LD4 Y_RNA.224-201ENST00000364308 111 ntBASIC2.1□□□□□ -2.07
TRIM47Q96LD4 RNU7-102P-201ENST00000458948 62 ntBASIC2.1□□□□□ -2.07
TRIM47Q96LD4 MIR4299-201ENST00000577899 72 ntBASIC2.1□□□□□ -2.07
TRIM47Q96LD4 MIR502-201ENST00000606349 86 ntBASIC2.1□□□□□ -2.07
TRIM47Q96LD4 AC027335.2-201ENST00000624030 375 ntBASIC2.1□□□□□ -2.07
TRIM47Q96LD4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM47Q96LD4 Y_RNA.32-201ENST00000362589 110 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 Y_RNA.250-201ENST00000364542 110 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 MIR521-2-201ENST00000384818 87 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 RPS26P5-201ENST00000418544 335 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM47Q96LD4 RNU7-95P-201ENST00000459222 64 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 RNU7-40P-201ENST00000516397 64 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 AC036111.3-201ENST00000526389 112 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 U2.7-201ENST00000619197 100 ntBASIC2.09□□□□□ -2.07
TRIM47Q96LD4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM47Q96LD4 MIR938-201ENST00000401216 83 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 snoU13.13-201ENST00000458842 104 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 AC021146.9-201ENST00000512503 156 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 SNORA31.14-201ENST00000516728 116 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 RNU6-231P-201ENST00000517122 103 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM47Q96LD4 MIR3664-201ENST00000579074 99 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 MIR4255-201ENST00000579351 72 ntBASIC2.08□□□□□ -2.08
TRIM47Q96LD4 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
TRIM47Q96LD4 SNORA41B-201ENST00000384785 128 ntBASIC2.06□□□□□ -2.08
TRIM47Q96LD4 RNA5SP212-201ENST00000391223 107 ntBASIC2.06□□□□□ -2.08
TRIM47Q96LD4 RNU1-123P-201ENST00000458950 160 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 248.7 ms