Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-1275P-201ENST00000391087 107 ntBASIC1.24□□□□□ -2.21
CALR3Q96L12 AL450471.1-201ENST00000447509 127 ntBASIC1.24□□□□□ -2.21
CALR3Q96L12 Y_RNA.660-201ENST00000516002 120 ntBASIC1.24□□□□□ -2.21
CALR3Q96L12 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.24□□□□□ -2.21
CALR3Q96L12 MIR4303-201ENST00000581299 66 ntBASIC1.24□□□□□ -2.21
CALR3Q96L12 SNORA36.2-201ENST00000384004 127 ntBASIC1.23□□□□□ -2.21
CALR3Q96L12 MIR3140-201ENST00000583685 90 ntBASIC1.23□□□□□ -2.21
CALR3Q96L12 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CALR3Q96L12 SNORA36.1-201ENST00000363424 132 ntBASIC1.22□□□□□ -2.21
CALR3Q96L12 MIR519E-201ENST00000385075 84 ntBASIC1.22□□□□□ -2.21
CALR3Q96L12 SNORD77.2-201ENST00000391045 68 ntBASIC1.22□□□□□ -2.21
CALR3Q96L12 RNA5SP227-201ENST00000516184 113 ntBASIC1.22□□□□□ -2.21
CALR3Q96L12 RNA5SP268-201ENST00000516828 124 ntBASIC1.22□□□□□ -2.21
CALR3Q96L12 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
CALR3Q96L12 RNU6-315P-201ENST00000362666 107 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 Y_RNA.264-201ENST00000364665 102 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 RNU6-1187P-201ENST00000364771 110 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 RNU6-482P-201ENST00000391068 107 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 SNORA17.3-201ENST00000391159 129 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 RNU6-1052P-201ENST00000411398 104 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 RNU6-719P-201ENST00000516671 104 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 AC211469.2-201ENST00000605461 205 ntBASIC1.21□□□□□ -2.22
CALR3Q96L12 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CALR3Q96L12 RNU6-208P-201ENST00000362431 107 ntBASIC1.2□□□□□ -2.22
CALR3Q96L12 RNU6-161P-201ENST00000363051 106 ntBASIC1.2□□□□□ -2.22
CALR3Q96L12 RNU6-110P-201ENST00000384508 104 ntBASIC1.2□□□□□ -2.22
CALR3Q96L12 RNU6-1108P-201ENST00000516308 104 ntBASIC1.2□□□□□ -2.22
CALR3Q96L12 RNU1-17P-201ENST00000363022 152 ntBASIC1.19□□□□□ -2.22
CALR3Q96L12 RNU6-478P-201ENST00000363904 110 ntBASIC1.19□□□□□ -2.22
CALR3Q96L12 MIR140-201ENST00000385282 100 ntBASIC1.19□□□□□ -2.22
CALR3Q96L12 AL591806.2-201ENST00000433122 173 ntBASIC1.19□□□□□ -2.22
CALR3Q96L12 AC108210.2-201ENST00000503681 201 ntBASIC1.19□□□□□ -2.22
CALR3Q96L12 MIR4712-201ENST00000583750 82 ntBASIC1.19□□□□□ -2.22
CALR3Q96L12 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CALR3Q96L12 RNU6-686P-201ENST00000364839 107 ntBASIC1.18□□□□□ -2.22
CALR3Q96L12 RNU6-279P-201ENST00000391297 101 ntBASIC1.18□□□□□ -2.22
CALR3Q96L12 snoU13.17-201ENST00000458802 104 ntBASIC1.18□□□□□ -2.22
CALR3Q96L12 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CALR3Q96L12 RNY1P8-201ENST00000383970 114 ntBASIC1.17□□□□□ -2.22
CALR3Q96L12 RNA5SP225-201ENST00000410874 135 ntBASIC1.17□□□□□ -2.22
CALR3Q96L12 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.17□□□□□ -2.22
CALR3Q96L12 snoU13.23-201ENST00000458863 104 ntBASIC1.17□□□□□ -2.22
CALR3Q96L12 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
CALR3Q96L12 Y_RNA.94-201ENST00000363068 106 ntBASIC1.16□□□□□ -2.22
CALR3Q96L12 RNU6-380P-201ENST00000410207 107 ntBASIC1.16□□□□□ -2.22
CALR3Q96L12 RNA5SP395-201ENST00000516567 118 ntBASIC1.16□□□□□ -2.22
CALR3Q96L12 MIR4298-201ENST00000584380 73 ntBASIC1.16□□□□□ -2.22
CALR3Q96L12 AC103810.9-201ENST00000606688 112 ntBASIC1.16□□□□□ -2.22
CALR3Q96L12 MIRLET7A1-201ENST00000362295 80 ntBASIC1.15□□□□□ -2.23
CALR3Q96L12 SNORA24B-201ENST00000384176 131 ntBASIC1.15□□□□□ -2.23
CALR3Q96L12 SNORA8.2-201ENST00000384372 139 ntBASIC1.15□□□□□ -2.23
CALR3Q96L12 RNU6-269P-201ENST00000391077 97 ntBASIC1.15□□□□□ -2.23
CALR3Q96L12 RPL39P28-201ENST00000465655 155 ntBASIC1.15□□□□□ -2.23
CALR3Q96L12 PSMC1P5-201ENST00000512850 177 ntBASIC1.15□□□□□ -2.23
CALR3Q96L12 AL162376.1-201ENST00000624117 175 ntBASIC1.15□□□□□ -2.23
CALR3Q96L12 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.15□□□□□ -2.23
CALR3Q96L12 RNU7-95P-201ENST00000459222 64 ntBASIC1.14□□□□□ -2.23
CALR3Q96L12 AC104984.5-201ENST00000586878 94 ntBASIC1.14□□□□□ -2.23
CALR3Q96L12 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
CALR3Q96L12 RNU6-857P-201ENST00000515893 110 ntBASIC1.13□□□□□ -2.23
CALR3Q96L12 AC015712.3-201ENST00000559380 164 ntBASIC1.13□□□□□ -2.23
CALR3Q96L12 MIR7107-201ENST00000611489 80 ntBASIC1.13□□□□□ -2.23
CALR3Q96L12 MIR6715A-201ENST00000615929 79 ntBASIC1.13□□□□□ -2.23
CALR3Q96L12 AL353997.5-201ENST00000618886 171 ntBASIC1.13□□□□□ -2.23
CALR3Q96L12 AC092634.7-201ENST00000621022 103 ntBASIC1.13□□□□□ -2.23
CALR3Q96L12 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CALR3Q96L12 MIR764-201ENST00000390811 85 ntBASIC1.12□□□□□ -2.23
CALR3Q96L12 AC093423.1-201ENST00000440817 142 ntBASIC1.12□□□□□ -2.23
CALR3Q96L12 AC097510.1-201ENST00000510945 133 ntBASIC1.12□□□□□ -2.23
CALR3Q96L12 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CALR3Q96L12 RNU6-1094P-201ENST00000362416 104 ntBASIC1.11□□□□□ -2.23
CALR3Q96L12 RNA5SP517-201ENST00000364724 117 ntBASIC1.11□□□□□ -2.23
CALR3Q96L12 RNU6-24P-201ENST00000384440 107 ntBASIC1.11□□□□□ -2.23
CALR3Q96L12 RNU4-62P-201ENST00000410125 130 ntBASIC1.11□□□□□ -2.23
CALR3Q96L12 RNU2-59P-201ENST00000410482 191 ntBASIC1.11□□□□□ -2.23
CALR3Q96L12 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CALR3Q96L12 RNU1-141P-201ENST00000364623 158 ntBASIC1.1□□□□□ -2.23
CALR3Q96L12 RNU6-1177P-201ENST00000391058 104 ntBASIC1.1□□□□□ -2.23
CALR3Q96L12 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.1□□□□□ -2.23
CALR3Q96L12 YWHAEP2-201ENST00000580066 112 ntBASIC1.1□□□□□ -2.23
CALR3Q96L12 MIR4524B-201ENST00000581569 115 ntBASIC1.1□□□□□ -2.23
CALR3Q96L12 YWHAEP3-201ENST00000582767 121 ntBASIC1.1□□□□□ -2.23
CALR3Q96L12 MIR548O2-201ENST00000616090 70 ntBASIC1.1□□□□□ -2.23
CALR3Q96L12 Y_RNA.12-201ENST00000362393 112 ntBASIC1.09□□□□□ -2.23
CALR3Q96L12 MIR4460-201ENST00000577862 86 ntBASIC1.09□□□□□ -2.23
CALR3Q96L12 AC073869.9-201ENST00000641610 120 ntBASIC1.09□□□□□ -2.23
CALR3Q96L12 RNU6-638P-201ENST00000516582 104 ntBASIC1.08□□□□□ -2.24
CALR3Q96L12 AL590095.2-201ENST00000604136 117 ntBASIC1.08□□□□□ -2.24
CALR3Q96L12 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
CALR3Q96L12 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
CALR3Q96L12 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
CALR3Q96L12 MT-TY-201ENST00000387409 66 ntBASIC1.06□□□□□ -2.24
CALR3Q96L12 SNORA40.8-201ENST00000411034 126 ntBASIC1.06□□□□□ -2.24
CALR3Q96L12 RNA5SP484-201ENST00000458857 111 ntBASIC1.06□□□□□ -2.24
CALR3Q96L12 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
CALR3Q96L12 Y_RNA.371-201ENST00000365591 113 ntBASIC1.05□□□□□ -2.24
CALR3Q96L12 Y_RNA.606-201ENST00000410579 103 ntBASIC1.05□□□□□ -2.24
CALR3Q96L12 AP1B1P2-201ENST00000416196 106 ntBASIC1.05□□□□□ -2.24
CALR3Q96L12 RNU6-681P-201ENST00000364012 104 ntBASIC1.04□□□□□ -2.24
CALR3Q96L12 SNORD71-201ENST00000411292 86 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms