Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-287P-201ENST00000516230 98 ntBASIC0.43□□□□□ -2.34
CDK5RAP3Q96JB5 SNORD101-201ENST00000384027 73 ntBASIC0.42□□□□□ -2.34
CDK5RAP3Q96JB5 MTATP8P2-201ENST00000435212 202 ntBASIC0.42□□□□□ -2.34
CDK5RAP3Q96JB5 MIR548AG2-201ENST00000581228 64 ntBASIC0.42□□□□□ -2.34
CDK5RAP3Q96JB5 MIR6755-201ENST00000619993 66 ntBASIC0.42□□□□□ -2.34
CDK5RAP3Q96JB5 RNU6-509P-201ENST00000363519 107 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 Y_RNA.207-201ENST00000364142 106 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 RNU6-32P-201ENST00000383948 107 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 RNU6-13P-201ENST00000384248 107 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 RNU6-12P-201ENST00000384604 107 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 RNU6-41P-201ENST00000384741 107 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 MIR518E-201ENST00000385252 88 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 RNU7-85P-201ENST00000458851 63 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 MIR2113-201ENST00000459007 91 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 RNU6-158P-201ENST00000517104 100 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 U7.3-201ENST00000616123 62 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 AP001318.4-201ENST00000616637 121 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 MIR2052-201ENST00000636055 55 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 AC073869.9-201ENST00000641610 120 ntBASIC0.41□□□□□ -2.34
CDK5RAP3Q96JB5 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 Y_RNA.508-201ENST00000384502 114 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 MIR617-201ENST00000385030 97 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 MIR936-201ENST00000401264 98 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-519P-201ENST00000410590 108 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-75P-201ENST00000515944 104 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 MIR4696-201ENST00000581431 70 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 MTRNR2L2-201ENST00000604882 87 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 AC022709.1-201ENST00000615967 87 ntBASIC0.4□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-664P-201ENST00000362381 107 ntBASIC0.39□□□□□ -2.35
CDK5RAP3Q96JB5 SNORD116-10-201ENST00000363791 102 ntBASIC0.39□□□□□ -2.35
CDK5RAP3Q96JB5 Y_RNA.495-201ENST00000384435 112 ntBASIC0.39□□□□□ -2.35
CDK5RAP3Q96JB5 MIR519E-201ENST00000385075 84 ntBASIC0.39□□□□□ -2.35
CDK5RAP3Q96JB5 SNORA40.13-201ENST00000516379 120 ntBASIC0.39□□□□□ -2.35
CDK5RAP3Q96JB5 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
CDK5RAP3Q96JB5 SNORA70.25-201ENST00000612741 95 ntBASIC0.39□□□□□ -2.35
CDK5RAP3Q96JB5 MIR760-201ENST00000390220 80 ntBASIC0.38□□□□□ -2.35
CDK5RAP3Q96JB5 AC073261.1-201ENST00000429409 121 ntBASIC0.38□□□□□ -2.35
CDK5RAP3Q96JB5 RNA5SP484-201ENST00000458857 111 ntBASIC0.38□□□□□ -2.35
CDK5RAP3Q96JB5 NAMPTP3-201ENST00000569273 224 ntBASIC0.38□□□□□ -2.35
CDK5RAP3Q96JB5 RNU1-29P-201ENST00000606574 126 ntBASIC0.38□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
CDK5RAP3Q96JB5 RNA5SP436-201ENST00000516020 115 ntBASIC0.37□□□□□ -2.35
CDK5RAP3Q96JB5 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-1057P-201ENST00000517162 102 ntBASIC0.37□□□□□ -2.35
CDK5RAP3Q96JB5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
CDK5RAP3Q96JB5 Y_RNA.239-201ENST00000364444 113 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 AC006210.1-201ENST00000424882 111 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 SNORD4B-201ENST00000459083 72 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-848P-201ENST00000515948 107 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 RNU7-129P-201ENST00000516128 62 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-617P-201ENST00000516147 107 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-473P-201ENST00000516164 107 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.36□□□□□ -2.35
CDK5RAP3Q96JB5 MIRLET7F1-201ENST00000362202 87 ntBASIC0.35□□□□□ -2.35
CDK5RAP3Q96JB5 RNU1-141P-201ENST00000364623 158 ntBASIC0.35□□□□□ -2.35
CDK5RAP3Q96JB5 RNU6-815P-201ENST00000384080 113 ntBASIC0.35□□□□□ -2.35
CDK5RAP3Q96JB5 SNORD110-201ENST00000408189 75 ntBASIC0.35□□□□□ -2.35
CDK5RAP3Q96JB5 MIR6515-201ENST00000619843 57 ntBASIC0.35□□□□□ -2.35
CDK5RAP3Q96JB5 Y_RNA.190-201ENST00000363964 101 ntBASIC0.34□□□□□ -2.36
CDK5RAP3Q96JB5 Y_RNA.290-201ENST00000364879 114 ntBASIC0.34□□□□□ -2.36
CDK5RAP3Q96JB5 Y_RNA.348-201ENST00000365403 103 ntBASIC0.34□□□□□ -2.36
CDK5RAP3Q96JB5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-935P-201ENST00000410371 100 ntBASIC0.34□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.34□□□□□ -2.36
CDK5RAP3Q96JB5 MIR5706-201ENST00000579841 80 ntBASIC0.34□□□□□ -2.36
CDK5RAP3Q96JB5 Y_RNA.81-201ENST00000362997 102 ntBASIC0.33□□□□□ -2.36
CDK5RAP3Q96JB5 RNA5SP193-201ENST00000410353 107 ntBASIC0.33□□□□□ -2.36
CDK5RAP3Q96JB5 Y_RNA.609-201ENST00000410669 89 ntBASIC0.33□□□□□ -2.36
CDK5RAP3Q96JB5 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
CDK5RAP3Q96JB5 SNORA9.1-201ENST00000362412 131 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-153P-201ENST00000364422 104 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 RNA5SP128-201ENST00000365305 116 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-132P-201ENST00000383863 107 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 MIR548U-201ENST00000390728 81 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 Y_RNA.677-201ENST00000516401 85 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 AC026421.1-201ENST00000519101 163 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 AC069113.3-201ENST00000521019 150 ntBASIC0.32□□□□□ -2.36
CDK5RAP3Q96JB5 AC093423.1-201ENST00000440817 142 ntBASIC0.31□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-168P-201ENST00000516189 101 ntBASIC0.31□□□□□ -2.36
CDK5RAP3Q96JB5 MIR4460-201ENST00000577862 86 ntBASIC0.31□□□□□ -2.36
CDK5RAP3Q96JB5 U7.6-201ENST00000610841 64 ntBASIC0.31□□□□□ -2.36
CDK5RAP3Q96JB5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.31□□□□□ -2.36
CDK5RAP3Q96JB5 MIR3064-201ENST00000581130 66 ntBASIC0.3□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-640P-201ENST00000363693 105 ntBASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-811P-201ENST00000384069 107 ntBASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 RNU6-905P-201ENST00000384434 107 ntBASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 MIR451A-201ENST00000385059 72 ntBASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 AC104996.3-201ENST00000590718 94 ntBASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 MALAT1.1-201ENST00000618249 95 ntBASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 MIR499B-201ENST00000636498 73 ntBASIC0.29□□□□□ -2.36
CDK5RAP3Q96JB5 RNU4-32P-201ENST00000363404 141 ntBASIC0.28□□□□□ -2.36
CDK5RAP3Q96JB5 RNA5SP89-201ENST00000410300 108 ntBASIC0.28□□□□□ -2.36
CDK5RAP3Q96JB5 snoU13.18-201ENST00000459483 104 ntBASIC0.28□□□□□ -2.36
CDK5RAP3Q96JB5 AC069503.3-201ENST00000618674 145 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms