Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC025166.1-201ENST00000612411 163 ntBASIC-0.61□□□□□ -2.51
SKA1Q96BD8 RN7SL660P-201ENST00000614852 299 ntBASIC-0.61□□□□□ -2.51
SKA1Q96BD8 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.62□□□□□ -2.51
SKA1Q96BD8 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.62□□□□□ -2.51
SKA1Q96BD8 MIR224-201ENST00000384889 81 ntBASIC-0.62□□□□□ -2.51
SKA1Q96BD8 MT-TY-201ENST00000387409 66 ntBASIC-0.62□□□□□ -2.51
SKA1Q96BD8 RNU6-466P-201ENST00000391224 103 ntBASIC-0.62□□□□□ -2.51
SKA1Q96BD8 U6.100-201ENST00000636230 99 ntBASIC-0.62□□□□□ -2.51
SKA1Q96BD8 U8.6-201ENST00000364939 135 ntBASIC-0.63□□□□□ -2.51
SKA1Q96BD8 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.63□□□□□ -2.51
SKA1Q96BD8 MIR216B-201ENST00000390186 82 ntBASIC-0.63□□□□□ -2.51
SKA1Q96BD8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.63□□□□□ -2.51
SKA1Q96BD8 AL161932.1-201ENST00000437408 146 ntBASIC-0.63□□□□□ -2.51
SKA1Q96BD8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.63□□□□□ -2.51
SKA1Q96BD8 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.63□□□□□ -2.51
SKA1Q96BD8 SNORD95.1-201ENST00000364099 68 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 RNU6-816P-201ENST00000390914 107 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 AL442128.1-201ENST00000615151 90 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
SKA1Q96BD8 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.65□□□□□ -2.51
SKA1Q96BD8 RNU6-154P-201ENST00000384306 106 ntBASIC-0.65□□□□□ -2.51
SKA1Q96BD8 AC096720.1-201ENST00000604441 183 ntBASIC-0.65□□□□□ -2.51
SKA1Q96BD8 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
SKA1Q96BD8 RNU6-957P-201ENST00000363652 99 ntBASIC-0.66□□□□□ -2.52
SKA1Q96BD8 SNORD58C-201ENST00000365223 64 ntBASIC-0.66□□□□□ -2.52
SKA1Q96BD8 RNU6-886P-201ENST00000384319 105 ntBASIC-0.66□□□□□ -2.52
SKA1Q96BD8 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.66□□□□□ -2.52
SKA1Q96BD8 AL353813.1-201ENST00000440700 253 ntBASIC-0.66□□□□□ -2.52
SKA1Q96BD8 SNORD126-201ENST00000459475 77 ntBASIC-0.66□□□□□ -2.52
SKA1Q96BD8 RNU6-235P-201ENST00000362644 107 ntBASIC-0.67□□□□□ -2.52
SKA1Q96BD8 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.67□□□□□ -2.52
SKA1Q96BD8 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.67□□□□□ -2.52
SKA1Q96BD8 RNU6-480P-201ENST00000384332 107 ntBASIC-0.67□□□□□ -2.52
SKA1Q96BD8 MTND5P18-201ENST00000445624 1801 ntBASIC-0.67□□□□□ -2.52
SKA1Q96BD8 AC244250.2-201ENST00000418731 148 ntBASIC-0.68□□□□□ -2.52
SKA1Q96BD8 MIR6507-201ENST00000613630 70 ntBASIC-0.68□□□□□ -2.52
SKA1Q96BD8 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.69□□□□□ -2.52
SKA1Q96BD8 SNORD101-201ENST00000384027 73 ntBASIC-0.69□□□□□ -2.52
SKA1Q96BD8 RNU6-811P-201ENST00000384069 107 ntBASIC-0.69□□□□□ -2.52
SKA1Q96BD8 MIR196A2-201ENST00000385189 110 ntBASIC-0.69□□□□□ -2.52
SKA1Q96BD8 MIR548AE1-201ENST00000583292 70 ntBASIC-0.69□□□□□ -2.52
SKA1Q96BD8 SNORA32.3-201ENST00000384772 121 ntBASIC-0.7□□□□□ -2.52
SKA1Q96BD8 RNU6-426P-201ENST00000516464 97 ntBASIC-0.7□□□□□ -2.52
SKA1Q96BD8 AC007012.1-201ENST00000567192 175 ntBASIC-0.7□□□□□ -2.52
SKA1Q96BD8 MIR4788-201ENST00000639104 80 ntBASIC-0.7□□□□□ -2.52
SKA1Q96BD8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.71□□□□□ -2.52
SKA1Q96BD8 MTND5P41-201ENST00000517498 206 ntBASIC-0.71□□□□□ -2.52
SKA1Q96BD8 uc_338.36-201ENST00000622331 158 ntBASIC-0.71□□□□□ -2.52
SKA1Q96BD8 MIR20A-201ENST00000362279 71 ntBASIC-0.72□□□□□ -2.52
SKA1Q96BD8 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.72□□□□□ -2.52
SKA1Q96BD8 RNU6-664P-201ENST00000362381 107 ntBASIC-0.73□□□□□ -2.53
SKA1Q96BD8 RNA5SP272-201ENST00000516095 111 ntBASIC-0.73□□□□□ -2.53
SKA1Q96BD8 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.74□□□□□ -2.53
SKA1Q96BD8 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.74□□□□□ -2.53
SKA1Q96BD8 MIR539-201ENST00000365690 78 ntBASIC-0.74□□□□□ -2.53
SKA1Q96BD8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.74□□□□□ -2.53
SKA1Q96BD8 RNA5SP205-201ENST00000364653 136 ntBASIC-0.75□□□□□ -2.53
SKA1Q96BD8 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.75□□□□□ -2.53
SKA1Q96BD8 SNORA40-201ENST00000388090 126 ntBASIC-0.75□□□□□ -2.53
SKA1Q96BD8 RNA5SP67-201ENST00000516422 131 ntBASIC-0.75□□□□□ -2.53
SKA1Q96BD8 RNU6-175P-201ENST00000516896 107 ntBASIC-0.75□□□□□ -2.53
SKA1Q96BD8 MIR4696-201ENST00000581431 70 ntBASIC-0.75□□□□□ -2.53
SKA1Q96BD8 MIR655-201ENST00000362159 97 ntBASIC-0.76□□□□□ -2.53
SKA1Q96BD8 RNU6-935P-201ENST00000410371 100 ntBASIC-0.76□□□□□ -2.53
SKA1Q96BD8 MTND4LP9-201ENST00000427694 174 ntBASIC-0.76□□□□□ -2.53
SKA1Q96BD8 AC244090.1-201ENST00000441884 93 ntBASIC-0.76□□□□□ -2.53
SKA1Q96BD8 snosnR66.1-201ENST00000391095 99 ntBASIC-0.77□□□□□ -2.53
SKA1Q96BD8 SNORD75.1-201ENST00000408373 60 ntBASIC-0.77□□□□□ -2.53
SKA1Q96BD8 snoU13.11-201ENST00000459219 104 ntBASIC-0.77□□□□□ -2.53
SKA1Q96BD8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.77□□□□□ -2.53
SKA1Q96BD8 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.78□□□□□ -2.53
SKA1Q96BD8 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.78□□□□□ -2.53
SKA1Q96BD8 MIR4694-201ENST00000578534 80 ntBASIC-0.78□□□□□ -2.53
SKA1Q96BD8 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.79□□□□□ -2.54
SKA1Q96BD8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.79□□□□□ -2.54
SKA1Q96BD8 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.79□□□□□ -2.54
SKA1Q96BD8 RNU6-772P-201ENST00000516042 105 ntBASIC-0.79□□□□□ -2.54
SKA1Q96BD8 MIR4679-2-201ENST00000578358 77 ntBASIC-0.79□□□□□ -2.54
SKA1Q96BD8 MIR548O2-201ENST00000616090 70 ntBASIC-0.79□□□□□ -2.54
SKA1Q96BD8 AL157777.2-201ENST00000258070 137 ntBASIC-0.8□□□□□ -2.54
SKA1Q96BD8 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.8□□□□□ -2.54
SKA1Q96BD8 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.8□□□□□ -2.54
SKA1Q96BD8 MIR652-201ENST00000385278 98 ntBASIC-0.8□□□□□ -2.54
SKA1Q96BD8 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.8□□□□□ -2.54
SKA1Q96BD8 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.81□□□□□ -2.54
SKA1Q96BD8 MIR577-201ENST00000385196 96 ntBASIC-0.81□□□□□ -2.54
SKA1Q96BD8 RNU7-200P-201ENST00000516105 62 ntBASIC-0.81□□□□□ -2.54
SKA1Q96BD8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.81□□□□□ -2.54
SKA1Q96BD8 AL627230.5-201ENST00000619807 58 ntBASIC-0.81□□□□□ -2.54
SKA1Q96BD8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.82□□□□□ -2.54
SKA1Q96BD8 AL078595.1-201ENST00000404458 226 ntBASIC-0.82□□□□□ -2.54
SKA1Q96BD8 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.82□□□□□ -2.54
SKA1Q96BD8 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.83□□□□□ -2.54
SKA1Q96BD8 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms