Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 MIR2113-201ENST00000459007 91 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 RPS29P1-201ENST00000465274 159 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 AC026421.1-201ENST00000519101 163 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 CYP3A137P-201ENST00000562436 69 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 MIR4696-201ENST00000581431 70 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.42□□□□□ -2.34
NPIPB3Q92617 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
NPIPB3Q92617 Y_RNA.207-201ENST00000364142 106 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 RNU6-1131P-201ENST00000364955 107 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 MIR499A-201ENST00000384903 122 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 MIR617-201ENST00000385030 97 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 MIR216A-201ENST00000385063 110 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 MIR548U-201ENST00000390728 81 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 RNU6-287P-201ENST00000516230 98 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 Y_RNA.676-201ENST00000516393 96 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 MIR548AG2-201ENST00000581228 64 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 MIR4452-201ENST00000583004 71 ntBASIC0.41□□□□□ -2.34
NPIPB3Q92617 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 MIRLET7F1-201ENST00000362202 87 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 Y_RNA.239-201ENST00000364444 113 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 RNU6-811P-201ENST00000384069 107 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 RNY1P7-201ENST00000384743 110 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 RNU6-269P-201ENST00000391077 97 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 RNY4P30-201ENST00000410216 95 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 RNU6-935P-201ENST00000410371 100 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 AC073869.9-201ENST00000641610 120 ntBASIC0.4□□□□□ -2.35
NPIPB3Q92617 RNU6-509P-201ENST00000363519 107 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 RNU6-132P-201ENST00000383863 107 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 MIR518E-201ENST00000385252 88 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 RNU6-848P-201ENST00000515948 107 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 RNU6-617P-201ENST00000516147 107 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 RNU6-473P-201ENST00000516164 107 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 RNU6-1049P-201ENST00000516414 107 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 RNU6-1057P-201ENST00000517162 102 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 MIR3064-201ENST00000581130 66 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 AC104996.3-201ENST00000590718 94 ntBASIC0.39□□□□□ -2.35
NPIPB3Q92617 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
NPIPB3Q92617 RNU6-49P-201ENST00000384256 107 ntBASIC0.38□□□□□ -2.35
NPIPB3Q92617 Y_RNA.508-201ENST00000384502 114 ntBASIC0.38□□□□□ -2.35
NPIPB3Q92617 MIR519E-201ENST00000385075 84 ntBASIC0.38□□□□□ -2.35
NPIPB3Q92617 MIR151B-201ENST00000584249 96 ntBASIC0.38□□□□□ -2.35
NPIPB3Q92617 AL078603.1-201ENST00000603824 313 ntBASIC0.38□□□□□ -2.35
NPIPB3Q92617 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 RNU4-32P-201ENST00000363404 141 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 Y_RNA.224-201ENST00000364308 111 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 Y_RNA.423-201ENST00000384057 113 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 Y_RNA.491-201ENST00000384417 107 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 SNORD116-22-201ENST00000384430 92 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
NPIPB3Q92617 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
NPIPB3Q92617 RNU6-844P-201ENST00000517175 102 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 MIR4752-201ENST00000579672 72 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 MIR4714-201ENST00000580728 77 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 MIR4668-201ENST00000582284 70 ntBASIC0.37□□□□□ -2.35
NPIPB3Q92617 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
NPIPB3Q92617 RNY1P4-201ENST00000384595 115 ntBASIC0.36□□□□□ -2.35
NPIPB3Q92617 MIR451A-201ENST00000385059 72 ntBASIC0.36□□□□□ -2.35
NPIPB3Q92617 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.36□□□□□ -2.35
NPIPB3Q92617 RNA5SP484-201ENST00000458857 111 ntBASIC0.36□□□□□ -2.35
NPIPB3Q92617 MIR6788-201ENST00000618842 66 ntBASIC0.36□□□□□ -2.35
NPIPB3Q92617 RNA5SP499-201ENST00000363982 119 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 SNORA2A-201ENST00000383885 135 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 MIR216B-201ENST00000390186 82 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 MIR548J-201ENST00000408833 112 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 RNA5SP220-201ENST00000516298 104 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 RNA5SP170-201ENST00000517150 101 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.35□□□□□ -2.35
NPIPB3Q92617 RNA5SP347-201ENST00000362445 119 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNU6-1298P-201ENST00000362456 101 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNU1-141P-201ENST00000364623 158 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNU6-1134P-201ENST00000365156 101 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNA5SP292-201ENST00000390974 118 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 MIR1236-201ENST00000408340 102 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNU6-402P-201ENST00000410678 103 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 Y_RNA.620-201ENST00000411009 88 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 AC006210.1-201ENST00000424882 111 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNU6-229P-201ENST00000516614 102 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 NAMPTP3-201ENST00000569273 224 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 MIR5000-201ENST00000577717 103 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 MIR5706-201ENST00000579841 80 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNU1-29P-201ENST00000606574 126 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 MIR6755-201ENST00000619993 66 ntBASIC0.34□□□□□ -2.36
NPIPB3Q92617 RNU6-633P-201ENST00000362612 103 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 RNU6-219P-201ENST00000364728 107 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 AC093423.1-201ENST00000440817 142 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 SNORA18.5-201ENST00000516616 101 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 RNU6-1223P-201ENST00000517124 104 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 MIR5582-201ENST00000579697 68 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 U7.6-201ENST00000610841 64 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 SNORA70.25-201ENST00000612741 95 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
NPIPB3Q92617 SNORD115-27-201ENST00000364430 82 ntBASIC0.32□□□□□ -2.36
NPIPB3Q92617 Y_RNA.369-201ENST00000365568 117 ntBASIC0.32□□□□□ -2.36
NPIPB3Q92617 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
NPIPB3Q92617 MIR519C-201ENST00000385053 87 ntBASIC0.32□□□□□ -2.36
NPIPB3Q92617 MIR760-201ENST00000390220 80 ntBASIC0.32□□□□□ -2.36
NPIPB3Q92617 SNORD110-201ENST00000408189 75 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms