Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-392P-201ENST00000364926 101 ntBASIC1.72□□□□□ -2.13
RNF43Q68DV7 RNU6-364P-201ENST00000384387 107 ntBASIC1.72□□□□□ -2.13
RNF43Q68DV7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.72□□□□□ -2.13
RNF43Q68DV7 U3.27-201ENST00000391237 200 ntBASIC1.72□□□□□ -2.13
RNF43Q68DV7 RNU6-274P-201ENST00000459566 107 ntBASIC1.72□□□□□ -2.13
RNF43Q68DV7 AC023827.1-201ENST00000569247 97 ntBASIC1.72□□□□□ -2.13
RNF43Q68DV7 MIR4511-201ENST00000582784 87 ntBASIC1.72□□□□□ -2.13
RNF43Q68DV7 RNU6-42P-201ENST00000384165 107 ntBASIC1.71□□□□□ -2.14
RNF43Q68DV7 AC244098.3-201ENST00000424803 96 ntBASIC1.71□□□□□ -2.14
RNF43Q68DV7 AC244505.6-201ENST00000452829 130 ntBASIC1.71□□□□□ -2.14
RNF43Q68DV7 AL512310.8-201ENST00000550183 120 ntBASIC1.71□□□□□ -2.14
RNF43Q68DV7 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
RNF43Q68DV7 AL078603.1-201ENST00000603824 313 ntBASIC1.71□□□□□ -2.14
RNF43Q68DV7 AL109933.3-201ENST00000619095 188 ntBASIC1.71□□□□□ -2.14
RNF43Q68DV7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RNF43Q68DV7 SNORD111-201ENST00000408139 94 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 RNU7-102P-201ENST00000458948 62 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 RNU6-752P-201ENST00000516376 102 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 AC106800.4-201ENST00000614905 153 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 AC027335.2-201ENST00000624030 375 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 AC103706.3-201ENST00000636297 85 ntBASIC1.7□□□□□ -2.14
RNF43Q68DV7 SNORD33-201ENST00000362761 85 ntBASIC1.69□□□□□ -2.14
RNF43Q68DV7 MIR938-201ENST00000401216 83 ntBASIC1.69□□□□□ -2.14
RNF43Q68DV7 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
RNF43Q68DV7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF43Q68DV7 SNORD115-44-201ENST00000365391 82 ntBASIC1.68□□□□□ -2.14
RNF43Q68DV7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.68□□□□□ -2.14
RNF43Q68DV7 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
RNF43Q68DV7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.68□□□□□ -2.14
RNF43Q68DV7 AL691482.2-201ENST00000457453 84 ntBASIC1.68□□□□□ -2.14
RNF43Q68DV7 RNU6-982P-201ENST00000516216 102 ntBASIC1.68□□□□□ -2.14
RNF43Q68DV7 MIR4452-201ENST00000583004 71 ntBASIC1.68□□□□□ -2.14
RNF43Q68DV7 MIR6734-201ENST00000621166 68 ntBASIC1.68□□□□□ -2.14
RNF43Q68DV7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.67□□□□□ -2.14
RNF43Q68DV7 SNORA31.2-201ENST00000516019 134 ntBASIC1.67□□□□□ -2.14
RNF43Q68DV7 RNA5SP220-201ENST00000516298 104 ntBASIC1.67□□□□□ -2.14
RNF43Q68DV7 RNU7-13P-201ENST00000516413 62 ntBASIC1.67□□□□□ -2.14
RNF43Q68DV7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
RNF43Q68DV7 RNU6-369P-201ENST00000362515 102 ntBASIC1.66□□□□□ -2.14
RNF43Q68DV7 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
RNF43Q68DV7 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
RNF43Q68DV7 AC110620.1-201ENST00000416042 228 ntBASIC1.66□□□□□ -2.14
RNF43Q68DV7 MIR548AG2-201ENST00000581228 64 ntBASIC1.66□□□□□ -2.14
RNF43Q68DV7 MIR4804-201ENST00000581683 73 ntBASIC1.66□□□□□ -2.14
RNF43Q68DV7 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 AC008834.1-201ENST00000511612 175 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 RNA5SP480-201ENST00000516840 109 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 RN7SKP88-201ENST00000516847 250 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 7SK.8-201ENST00000612110 250 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 7SK.11-201ENST00000615477 250 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 7SK.13-201ENST00000622040 250 ntBASIC1.65□□□□□ -2.15
RNF43Q68DV7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
RNF43Q68DV7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RNF43Q68DV7 RNU6-1187P-201ENST00000364771 110 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 SNORD75.2-201ENST00000408784 58 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.64□□□□□ -2.15
RNF43Q68DV7 RNU7-56P-201ENST00000458744 62 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 RNU6-977P-201ENST00000516411 103 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 SNORA31.14-201ENST00000516728 116 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 RNU1-92P-201ENST00000517017 135 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 NAMPTP3-201ENST00000569273 224 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 AL157834.3-201ENST00000615543 103 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 AC069503.3-201ENST00000618674 145 ntBASIC1.64□□□□□ -2.15
RNF43Q68DV7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
RNF43Q68DV7 Y_RNA.32-201ENST00000362589 110 ntBASIC1.63□□□□□ -2.15
RNF43Q68DV7 SNORD115-24-201ENST00000363528 82 ntBASIC1.63□□□□□ -2.15
RNF43Q68DV7 RNU6-1126P-201ENST00000384002 107 ntBASIC1.63□□□□□ -2.15
RNF43Q68DV7 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
RNF43Q68DV7 MIR633-201ENST00000384821 98 ntBASIC1.63□□□□□ -2.15
RNF43Q68DV7 AL591704.2-201ENST00000421658 181 ntBASIC1.63□□□□□ -2.15
RNF43Q68DV7 RNU7-21P-201ENST00000459430 62 ntBASIC1.63□□□□□ -2.15
RNF43Q68DV7 RNU6-495P-201ENST00000362995 107 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 RNA5SP403-201ENST00000363598 108 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 MIR203A-201ENST00000384836 110 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 RNU1-119P-201ENST00000391122 165 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 RNU6-994P-201ENST00000410507 111 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.62□□□□□ -2.15
RNF43Q68DV7 RNU1-123P-201ENST00000458950 160 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 RNA5SP102-201ENST00000516865 106 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 RNU7-161P-201ENST00000517289 62 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 MIR3920-201ENST00000581751 86 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 RMST_2.1-201ENST00000617263 136 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 uc_338.16-201ENST00000621804 95 ntBASIC1.62□□□□□ -2.15
RNF43Q68DV7 RNU6-669P-201ENST00000365575 107 ntBASIC1.61□□□□□ -2.15
RNF43Q68DV7 RNU6-1039P-201ENST00000383931 107 ntBASIC1.61□□□□□ -2.15
RNF43Q68DV7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.61□□□□□ -2.15
RNF43Q68DV7 RNU7-24P-201ENST00000458867 62 ntBASIC1.61□□□□□ -2.15
RNF43Q68DV7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.61□□□□□ -2.15
RNF43Q68DV7 MIR6509-201ENST00000614603 85 ntBASIC1.61□□□□□ -2.15
RNF43Q68DV7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RNF43Q68DV7 MIR100-201ENST00000385259 80 ntBASIC1.6□□□□□ -2.15
RNF43Q68DV7 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
RNF43Q68DV7 RNU6-668P-201ENST00000364180 107 ntBASIC1.59□□□□□ -2.15
RNF43Q68DV7 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
RNF43Q68DV7 RNU6-910P-201ENST00000390844 107 ntBASIC1.59□□□□□ -2.15
RNF43Q68DV7 MIR4421-201ENST00000578133 69 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms