Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC084782.3-201ENST00000612282 578 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 RNU6-80P-201ENST00000384195 107 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 MIR451A-201ENST00000385059 72 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 RNU6-400P-201ENST00000391173 106 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 AL365265.1-201ENST00000621045 234 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 AP000770.2-201ENST00000623694 100 ntBASIC-1.63□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.64□□□□□ -2.67
RFX7Q2KHR2 RNU6-194P-201ENST00000363862 105 ntBASIC-1.64□□□□□ -2.67
RFX7Q2KHR2 AC018880.2-201ENST00000414265 201 ntBASIC-1.64□□□□□ -2.67
RFX7Q2KHR2 RNU6-521P-201ENST00000516663 105 ntBASIC-1.64□□□□□ -2.67
RFX7Q2KHR2 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.64□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 RNA5SP405-201ENST00000363059 114 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 RNU6-121P-201ENST00000410525 99 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 SNORD42B-201ENST00000458893 67 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 FGF7P4-201ENST00000509595 295 ntBASIC-1.65□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 MT-TM-201ENST00000387377 68 ntBASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 MTND3P22-201ENST00000510932 243 ntBASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 RNU6-90P-201ENST00000606352 106 ntBASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 AC092794.1-201ENST00000612734 582 ntBASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 U6.96-201ENST00000636425 70 ntBASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.66□□□□□ -2.68
RFX7Q2KHR2 RNU6-79P-201ENST00000362511 107 ntBASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 RNU4-24P-201ENST00000364565 139 ntBASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 RNU6-643P-201ENST00000384018 107 ntBASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 MIR548F1-201ENST00000408667 84 ntBASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.67□□□□□ -2.68
RFX7Q2KHR2 RNU6-235P-201ENST00000362644 107 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 RNU6-578P-201ENST00000390980 103 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 RNU4-88P-201ENST00000411220 86 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 SNORD2.1-201ENST00000458762 69 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 RNY3P15-201ENST00000516297 97 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 MIR4490-201ENST00000582647 84 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 MIR5683-201ENST00000636514 76 ntBASIC-1.68□□□□□ -2.68
RFX7Q2KHR2 RNU6-770P-201ENST00000363929 105 ntBASIC-1.69□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.69□□□□□ -2.68
RFX7Q2KHR2 SNORD19-201ENST00000391191 68 ntBASIC-1.69□□□□□ -2.68
RFX7Q2KHR2 RNU7-152P-201ENST00000458982 64 ntBASIC-1.69□□□□□ -2.68
RFX7Q2KHR2 RNU7-6P-201ENST00000516845 62 ntBASIC-1.69□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 RNU6-695P-201ENST00000391157 104 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 MIR1252-201ENST00000408861 65 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 RNU6-101P-201ENST00000410323 104 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 AP002392.1-201ENST00000537692 208 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 AC080013.6-201ENST00000606185 215 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 AL512310.12-203ENST00000640543 90 ntBASIC-1.7□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 MIR548G-201ENST00000408442 89 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 RNU6-719P-201ENST00000516671 104 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 MIR548AM-201ENST00000584298 74 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.71□□□□□ -2.68
RFX7Q2KHR2 RNU6-647P-201ENST00000364243 107 ntBASIC-1.72□□□□□ -2.68
RFX7Q2KHR2 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.72□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.72□□□□□ -2.68
RFX7Q2KHR2 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.72□□□□□ -2.68
RFX7Q2KHR2 RNU6-818P-201ENST00000364837 108 ntBASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 SNORD18B-201ENST00000365659 72 ntBASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 RNU6-651P-201ENST00000411040 105 ntBASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 FGF7P7-201ENST00000514120 227 ntBASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 RNY4P20-201ENST00000516678 93 ntBASIC-1.72□□□□□ -2.69
RFX7Q2KHR2 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.73□□□□□ -2.69
RFX7Q2KHR2 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.73□□□□□ -2.69
RFX7Q2KHR2 RNU6-450P-201ENST00000364654 107 ntBASIC-1.73□□□□□ -2.69
RFX7Q2KHR2 RNU6-823P-201ENST00000391042 103 ntBASIC-1.73□□□□□ -2.69
RFX7Q2KHR2 RNU6-876P-201ENST00000391295 104 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms