Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SNORD28-201ENST00000384706 75 ntBASIC0.7□□□□□ -2.3
ERVFC1-1P60608 Y_RNA.596-201ENST00000410462 109 ntBASIC0.7□□□□□ -2.3
ERVFC1-1P60608 AC093729.1-201ENST00000513074 128 ntBASIC0.7□□□□□ -2.3
ERVFC1-1P60608 AC140658.3-201ENST00000567603 271 ntBASIC0.7□□□□□ -2.3
ERVFC1-1P60608 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
ERVFC1-1P60608 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
ERVFC1-1P60608 AC211469.2-201ENST00000605461 205 ntBASIC0.7□□□□□ -2.3
ERVFC1-1P60608 AL353765.1-201ENST00000605514 183 ntBASIC0.7□□□□□ -2.3
ERVFC1-1P60608 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 Y_RNA.426-201ENST00000384068 113 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 RNU6-242P-201ENST00000384359 107 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 Y_RNA.491-201ENST00000384417 107 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 SNORD90-201ENST00000391145 111 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ERVFC1-1P60608 Y_RNA.607-201ENST00000410597 98 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 RNU7-104P-201ENST00000459398 79 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 MIR4796-201ENST00000580742 81 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 MIR4639-201ENST00000584938 69 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 MIR7111-201ENST00000619751 72 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 AC244669.1-204ENST00000621564 178 ntBASIC0.69□□□□□ -2.3
ERVFC1-1P60608 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 Y_RNA.207-201ENST00000364142 106 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 RNU1-93P-201ENST00000364704 169 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 MIR548U-201ENST00000390728 81 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 RNU6-469P-201ENST00000516253 101 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 SNORA25.13-201ENST00000516395 103 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 RNU6-135P-201ENST00000516769 101 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 RNA5SP47-201ENST00000517230 109 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 MIR4666B-201ENST00000578142 81 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 MIR548AG2-201ENST00000581228 64 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 MIR3920-201ENST00000581751 86 ntBASIC0.68□□□□□ -2.3
ERVFC1-1P60608 RNU6-228P-201ENST00000362700 106 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 SNORD115-37-201ENST00000363768 82 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 Y_RNA.219-201ENST00000364232 113 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 RPS29P1-201ENST00000465274 159 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 RNU6-287P-201ENST00000516230 98 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 RNU7-13P-201ENST00000516413 62 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
ERVFC1-1P60608 MIR96-201ENST00000362288 78 ntBASIC0.66□□□□□ -2.3
ERVFC1-1P60608 SNORA36.1-201ENST00000363424 132 ntBASIC0.66□□□□□ -2.3
ERVFC1-1P60608 Y_RNA.239-201ENST00000364444 113 ntBASIC0.66□□□□□ -2.3
ERVFC1-1P60608 RNY1P8-201ENST00000383970 114 ntBASIC0.66□□□□□ -2.3
ERVFC1-1P60608 RNU6-1126P-201ENST00000384002 107 ntBASIC0.66□□□□□ -2.3
ERVFC1-1P60608 MIR520E-201ENST00000384867 87 ntBASIC0.66□□□□□ -2.3
ERVFC1-1P60608 RNU6-624P-201ENST00000363411 107 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 Y_RNA.313-201ENST00000365095 103 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 Y_RNA.316-201ENST00000365118 111 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 Y_RNA.437-201ENST00000384113 113 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 RNU6-1124P-201ENST00000384169 107 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 MIR532-201ENST00000385025 91 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 SNORD78.1-201ENST00000390866 65 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 MIR2113-201ENST00000459007 91 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
ERVFC1-1P60608 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 AC067863.3-201ENST00000624172 122 ntBASIC0.65□□□□□ -2.31
ERVFC1-1P60608 RNU6-1229P-201ENST00000364295 107 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 RNU6-726P-201ENST00000364680 107 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 SNORD115-44-201ENST00000365391 82 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 SNORD41.1-201ENST00000391000 69 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 RNU6-935P-201ENST00000410371 100 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.64□□□□□ -2.31
ERVFC1-1P60608 RNA5SP94-201ENST00000516917 108 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 SCARNA16.5-201ENST00000517114 183 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 MIR3202-2-201ENST00000635980 79 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 MIR6828-201ENST00000636181 60 ntBASIC0.64□□□□□ -2.31
ERVFC1-1P60608 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 RNU6-1051P-201ENST00000365471 102 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 RNU6-652P-201ENST00000365488 107 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 MIR489-201ENST00000384923 84 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 MIR451A-201ENST00000385059 72 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 RNU6-1275P-201ENST00000391087 107 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 MIR1255A-201ENST00000408338 113 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 AL450471.1-201ENST00000447509 127 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 RNU6-351P-201ENST00000516097 100 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 MIR3140-201ENST00000583685 90 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.63□□□□□ -2.31
ERVFC1-1P60608 SNORA63.2-201ENST00000362603 126 ntBASIC0.62□□□□□ -2.31
ERVFC1-1P60608 RNU6-478P-201ENST00000363904 110 ntBASIC0.62□□□□□ -2.31
ERVFC1-1P60608 RNU6-716P-201ENST00000365621 103 ntBASIC0.62□□□□□ -2.31
ERVFC1-1P60608 MIR548J-201ENST00000408833 112 ntBASIC0.62□□□□□ -2.31
ERVFC1-1P60608 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
ERVFC1-1P60608 RNA5SP395-201ENST00000516567 118 ntBASIC0.62□□□□□ -2.31
ERVFC1-1P60608 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.62□□□□□ -2.31
ERVFC1-1P60608 MIR6515-201ENST00000619843 57 ntBASIC0.62□□□□□ -2.31
ERVFC1-1P60608 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.62□□□□□ -2.31
ERVFC1-1P60608 SNORA24B-201ENST00000384176 131 ntBASIC0.61□□□□□ -2.31
ERVFC1-1P60608 MIR617-201ENST00000385030 97 ntBASIC0.61□□□□□ -2.31
ERVFC1-1P60608 MIR519E-201ENST00000385075 84 ntBASIC0.61□□□□□ -2.31
ERVFC1-1P60608 RNU6-1052P-201ENST00000411398 104 ntBASIC0.61□□□□□ -2.31
ERVFC1-1P60608 snoU13.17-201ENST00000458802 104 ntBASIC0.61□□□□□ -2.31
ERVFC1-1P60608 RNU6-719P-201ENST00000516671 104 ntBASIC0.61□□□□□ -2.31
ERVFC1-1P60608 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
ERVFC1-1P60608 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms