Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 Y_RNA.353-201ENST00000365440 108 ntBASIC0.01□□□□□ -2.41
TNFRSF4P43489 SNORA51.5-201ENST00000384126 131 ntBASIC0.01□□□□□ -2.41
TNFRSF4P43489 Y_RNA.596-201ENST00000410462 109 ntBASIC0.01□□□□□ -2.41
TNFRSF4P43489 AC008267.6-201ENST00000441664 139 ntBASIC0.01□□□□□ -2.41
TNFRSF4P43489 MIR2113-201ENST00000459007 91 ntBASIC0.01□□□□□ -2.41
TNFRSF4P43489 RNA5SP395-201ENST00000516567 118 ntBASIC0.01□□□□□ -2.41
TNFRSF4P43489 RNU6-86P-201ENST00000606534 107 ntBASIC0.01□□□□□ -2.41
TNFRSF4P43489 Y_RNA.261-201ENST00000364631 102 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 SNORD116-21-201ENST00000384507 92 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 MIR617-201ENST00000385030 97 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 MIR519E-201ENST00000385075 84 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 AC109327.2-201ENST00000448339 378 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 RNU6-287P-201ENST00000516230 98 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 RNU6-782P-201ENST00000516852 104 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 MIR548AG2-201ENST00000581228 64 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 MIR4677-201ENST00000584153 80 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 MIR548AD-201ENST00000584780 82 ntBASIC0□□□□□ -2.41
TNFRSF4P43489 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 SNORD45B-201ENST00000364617 72 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 RNU1-141P-201ENST00000364623 158 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 MIR145-201ENST00000384967 88 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 MIR892B-201ENST00000401279 77 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 RNU6-412P-201ENST00000516434 106 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 MIR4473-201ENST00000583731 91 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
TNFRSF4P43489 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.02□□□□□ -2.41
TNFRSF4P43489 RNA5SP163-201ENST00000410304 99 ntBASIC-0.02□□□□□ -2.41
TNFRSF4P43489 HMGN2P22-201ENST00000427588 175 ntBASIC-0.02□□□□□ -2.41
TNFRSF4P43489 snoU13.11-201ENST00000459219 104 ntBASIC-0.02□□□□□ -2.41
TNFRSF4P43489 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.02□□□□□ -2.41
TNFRSF4P43489 MIR4460-201ENST00000577862 86 ntBASIC-0.02□□□□□ -2.41
TNFRSF4P43489 MIR6759-201ENST00000638110 65 ntBASIC-0.02□□□□□ -2.41
TNFRSF4P43489 RNU4-36P-201ENST00000364294 144 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 SNORD101-201ENST00000384027 73 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.03□□□□□ -2.41
TNFRSF4P43489 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 MIR3613-201ENST00000579844 87 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 AL365222.1-201ENST00000614661 98 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 AC084368.1-201ENST00000620935 65 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 AC025521.1-201ENST00000621624 286 ntBASIC-0.03□□□□□ -2.41
TNFRSF4P43489 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 MIR516B1-201ENST00000385211 90 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 SNORA75.1-201ENST00000391130 148 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 RNU7-159P-201ENST00000459284 62 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 SNORA25.13-201ENST00000516395 103 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 YWHAEP2-201ENST00000580066 112 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 AC069503.3-201ENST00000618674 145 ntBASIC-0.04□□□□□ -2.42
TNFRSF4P43489 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.05□□□□□ -2.42
TNFRSF4P43489 RNU6-81P-201ENST00000365608 104 ntBASIC-0.05□□□□□ -2.42
TNFRSF4P43489 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.05□□□□□ -2.42
TNFRSF4P43489 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.05□□□□□ -2.42
TNFRSF4P43489 MIR3925-201ENST00000584674 77 ntBASIC-0.05□□□□□ -2.42
TNFRSF4P43489 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.05□□□□□ -2.42
TNFRSF4P43489 RNU6-35P-201ENST00000384530 107 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 RNU6-476P-201ENST00000384726 107 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
TNFRSF4P43489 MIR548H2-201ENST00000408874 88 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 AC093423.1-201ENST00000440817 142 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 RNU6-62P-201ENST00000516526 102 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 MIR4696-201ENST00000581431 70 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 MIR4439-201ENST00000583746 80 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 MIR4743-201ENST00000584576 69 ntBASIC-0.06□□□□□ -2.42
TNFRSF4P43489 RNU6-664P-201ENST00000362381 107 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 RNU6-929P-201ENST00000384429 107 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 RNU6-795P-201ENST00000516323 103 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 RNU6-65P-201ENST00000516332 98 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 AL513043.2-201ENST00000573941 143 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 AC103810.7-201ENST00000607821 91 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.07□□□□□ -2.42
TNFRSF4P43489 MIR6514-201ENST00000622549 70 ntBASIC-0.07□□□□□ -2.42
TNFRSF4P43489 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 RNU6-813P-201ENST00000384691 107 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 RNU6-935P-201ENST00000410371 100 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 SNORA19.1-201ENST00000410656 129 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 MIR5589-201ENST00000579442 60 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 MIR4636-201ENST00000582271 80 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 uc_338.10-201ENST00000621872 182 ntBASIC-0.08□□□□□ -2.42
TNFRSF4P43489 MT-TY-201ENST00000387409 66 ntBASIC-0.09□□□□□ -2.42
TNFRSF4P43489 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.09□□□□□ -2.42
TNFRSF4P43489 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.09□□□□□ -2.42
TNFRSF4P43489 RNA5SP476-201ENST00000516613 103 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms