Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RNA5SP517-201ENST00000364724 117 ntBASIC0.6□□□□□ -2.31
COL15A1P39059 Y_RNA.467-201ENST00000384297 102 ntBASIC0.6□□□□□ -2.31
COL15A1P39059 RNU6-30P-201ENST00000384561 107 ntBASIC0.6□□□□□ -2.31
COL15A1P39059 RNU6-813P-201ENST00000384691 107 ntBASIC0.6□□□□□ -2.31
COL15A1P39059 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
COL15A1P39059 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
COL15A1P39059 AC012531.4-201ENST00000616509 177 ntBASIC0.6□□□□□ -2.31
COL15A1P39059 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.6□□□□□ -2.31
COL15A1P39059 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
COL15A1P39059 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
COL15A1P39059 Y_RNA.96-201ENST00000363092 109 ntBASIC0.59□□□□□ -2.31
COL15A1P39059 SNORA8.2-201ENST00000384372 139 ntBASIC0.59□□□□□ -2.31
COL15A1P39059 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
COL15A1P39059 AC114737.2-201ENST00000421583 173 ntBASIC0.59□□□□□ -2.31
COL15A1P39059 SNORD36A-201ENST00000362874 73 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 Y_RNA.107-201ENST00000363190 121 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 SNORA36.1-201ENST00000363424 132 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 RNU6-755P-201ENST00000364400 103 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 Y_RNA.544-201ENST00000384650 113 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 RNU6-109P-201ENST00000516364 107 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 RNU6-184P-201ENST00000516514 107 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 RNU7-161P-201ENST00000517289 62 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 MIR548Z-201ENST00000584743 97 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 Y_RNA.818-201ENST00000618813 71 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
COL15A1P39059 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.57□□□□□ -2.32
COL15A1P39059 MIR4777-201ENST00000583710 86 ntBASIC0.57□□□□□ -2.32
COL15A1P39059 SNORA25.18-201ENST00000607153 114 ntBASIC0.57□□□□□ -2.32
COL15A1P39059 AC103810.7-201ENST00000607821 91 ntBASIC0.57□□□□□ -2.32
COL15A1P39059 RNU6-466P-201ENST00000391224 103 ntBASIC0.57□□□□□ -2.32
COL15A1P39059 Y_RNA.705-201ENST00000516862 110 ntBASIC0.57□□□□□ -2.32
COL15A1P39059 AC025521.1-201ENST00000621624 286 ntBASIC0.57□□□□□ -2.32
COL15A1P39059 RNA5SP403-201ENST00000363598 108 ntBASIC0.56□□□□□ -2.32
COL15A1P39059 RNU7-13P-201ENST00000516413 62 ntBASIC0.56□□□□□ -2.32
COL15A1P39059 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.56□□□□□ -2.32
COL15A1P39059 Y_RNA.93-201ENST00000363066 109 ntBASIC0.55□□□□□ -2.32
COL15A1P39059 MIR518A1-201ENST00000385068 85 ntBASIC0.55□□□□□ -2.32
COL15A1P39059 RNU6-972P-201ENST00000391208 107 ntBASIC0.55□□□□□ -2.32
COL15A1P39059 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
COL15A1P39059 RNU6-758P-201ENST00000516292 89 ntBASIC0.55□□□□□ -2.32
COL15A1P39059 RNU6-537P-201ENST00000517277 103 ntBASIC0.55□□□□□ -2.32
COL15A1P39059 MIR6828-201ENST00000636181 60 ntBASIC0.55□□□□□ -2.32
COL15A1P39059 RNU6-644P-201ENST00000391155 98 ntBASIC0.54□□□□□ -2.32
COL15A1P39059 RNA5SP299-201ENST00000391203 116 ntBASIC0.54□□□□□ -2.32
COL15A1P39059 AL513043.2-201ENST00000573941 143 ntBASIC0.54□□□□□ -2.32
COL15A1P39059 TRDV1-202ENST00000621643 102 ntBASIC0.54□□□□□ -2.32
COL15A1P39059 RNU6-887P-201ENST00000410660 100 ntBASIC0.53□□□□□ -2.32
COL15A1P39059 AL161932.1-201ENST00000437408 146 ntBASIC0.53□□□□□ -2.32
COL15A1P39059 RNU7-61P-201ENST00000515897 61 ntBASIC0.53□□□□□ -2.32
COL15A1P39059 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
COL15A1P39059 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.52□□□□□ -2.33
COL15A1P39059 SNORD118-201ENST00000363593 134 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 RNU6-957P-201ENST00000363652 99 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 RNU6-726P-201ENST00000364680 107 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 RNU6-32P-201ENST00000383948 107 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 RNU6-147P-201ENST00000383983 107 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 RNU6-13P-201ENST00000384248 107 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 RNU6-12P-201ENST00000384604 107 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 RNU6-41P-201ENST00000384741 107 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 MIR2052-201ENST00000636055 55 ntBASIC0.52□□□□□ -2.33
COL15A1P39059 snoU13.11-201ENST00000459219 104 ntBASIC0.51□□□□□ -2.33
COL15A1P39059 Y_RNA.648-201ENST00000459455 110 ntBASIC0.51□□□□□ -2.33
COL15A1P39059 MIR6718-201ENST00000616153 80 ntBASIC0.51□□□□□ -2.33
COL15A1P39059 SNORD115-44-201ENST00000365391 82 ntBASIC0.5□□□□□ -2.33
COL15A1P39059 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
COL15A1P39059 RNA5SP266-201ENST00000410273 108 ntBASIC0.5□□□□□ -2.33
COL15A1P39059 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.5□□□□□ -2.33
COL15A1P39059 AC104692.1-201ENST00000472406 90 ntBASIC0.49□□□□□ -2.33
COL15A1P39059 RNU6-65P-201ENST00000516332 98 ntBASIC0.49□□□□□ -2.33
COL15A1P39059 RNU6-1265P-201ENST00000516342 103 ntBASIC0.49□□□□□ -2.33
COL15A1P39059 SNORA40.13-201ENST00000516379 120 ntBASIC0.49□□□□□ -2.33
COL15A1P39059 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.49□□□□□ -2.33
COL15A1P39059 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
COL15A1P39059 Y_RNA.283-201ENST00000364798 112 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 SNORD58A-201ENST00000383875 65 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 Y_RNA.495-201ENST00000384435 112 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 Y_RNA.596-201ENST00000410462 109 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 MTATP8P2-201ENST00000435212 202 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 AC069271.1-201ENST00000445577 156 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 RNU7-74P-201ENST00000459104 62 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 MIR4536-1-201ENST00000583537 88 ntBASIC0.48□□□□□ -2.33
COL15A1P39059 SNORD41.1-201ENST00000391000 69 ntBASIC0.47□□□□□ -2.33
COL15A1P39059 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
COL15A1P39059 RNU6-162P-201ENST00000516228 103 ntBASIC0.47□□□□□ -2.33
COL15A1P39059 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.47□□□□□ -2.33
COL15A1P39059 MIR3920-201ENST00000581751 86 ntBASIC0.47□□□□□ -2.33
COL15A1P39059 AP001318.4-201ENST00000616637 121 ntBASIC0.47□□□□□ -2.33
COL15A1P39059 Y_RNA.81-201ENST00000362997 102 ntBASIC0.46□□□□□ -2.34
COL15A1P39059 SNORD116-10-201ENST00000363791 102 ntBASIC0.46□□□□□ -2.34
COL15A1P39059 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
COL15A1P39059 RNU6-519P-201ENST00000410590 108 ntBASIC0.46□□□□□ -2.34
COL15A1P39059 RNU6-158P-201ENST00000517104 100 ntBASIC0.46□□□□□ -2.34
COL15A1P39059 MTRNR2L2-201ENST00000604882 87 ntBASIC0.46□□□□□ -2.34
COL15A1P39059 U6.100-201ENST00000636230 99 ntBASIC0.46□□□□□ -2.34
COL15A1P39059 RNA5SP368-201ENST00000364298 116 ntBASIC0.45□□□□□ -2.34
COL15A1P39059 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
COL15A1P39059 U7.3-201ENST00000616123 62 ntBASIC0.45□□□□□ -2.34
COL15A1P39059 SNORD101-201ENST00000384027 73 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms