Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU7-107P-201ENST00000459121 61 ntBASIC-0.18□□□□□ -2.44
PTPN4P29074 RNU6-971P-201ENST00000516920 106 ntBASIC-0.18□□□□□ -2.44
PTPN4P29074 MIR3671-201ENST00000580455 88 ntBASIC-0.18□□□□□ -2.44
PTPN4P29074 MIR4802-201ENST00000581881 80 ntBASIC-0.18□□□□□ -2.44
PTPN4P29074 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 RNU6-957P-201ENST00000363652 99 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.19□□□□□ -2.44
PTPN4P29074 MIR4679-2-201ENST00000578358 77 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 MIR4645-201ENST00000583158 77 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 MIR4473-201ENST00000583731 91 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.19□□□□□ -2.44
PTPN4P29074 MIR6514-201ENST00000622549 70 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 AL035470.1-201ENST00000622571 220 ntBASIC-0.19□□□□□ -2.44
PTPN4P29074 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.2□□□□□ -2.44
PTPN4P29074 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.2□□□□□ -2.44
PTPN4P29074 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.2□□□□□ -2.44
PTPN4P29074 MIR577-201ENST00000385196 96 ntBASIC-0.2□□□□□ -2.44
PTPN4P29074 MIR4460-201ENST00000577862 86 ntBASIC-0.2□□□□□ -2.44
PTPN4P29074 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 RNU6-758P-201ENST00000516292 89 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 CR383656.4-201ENST00000546909 122 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 AC007012.1-201ENST00000567192 175 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 MIR4694-201ENST00000578534 80 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 YWHAEP2-201ENST00000580066 112 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 AC096720.1-201ENST00000604441 183 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 MIR3914-2-201ENST00000637339 95 ntBASIC-0.21□□□□□ -2.44
PTPN4P29074 RNU6-80P-201ENST00000384195 107 ntBASIC-0.22□□□□□ -2.44
PTPN4P29074 RNU6-907P-201ENST00000390924 102 ntBASIC-0.22□□□□□ -2.44
PTPN4P29074 RNU6-466P-201ENST00000391224 103 ntBASIC-0.22□□□□□ -2.44
PTPN4P29074 MIR548I1-201ENST00000408810 149 ntBASIC-0.22□□□□□ -2.44
PTPN4P29074 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.22□□□□□ -2.44
PTPN4P29074 AP001180.6-201ENST00000584918 159 ntBASIC-0.22□□□□□ -2.44
PTPN4P29074 MIR148A-201ENST00000362215 68 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 RNU6-46P-201ENST00000383860 107 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 RNU6-480P-201ENST00000384332 107 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 MT-TY-201ENST00000387409 66 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 snoU13.19-201ENST00000459148 104 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 snoU13.11-201ENST00000459219 104 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 uc_338.10-201ENST00000621872 182 ntBASIC-0.23□□□□□ -2.45
PTPN4P29074 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.24□□□□□ -2.45
PTPN4P29074 RNU6-209P-201ENST00000384118 107 ntBASIC-0.24□□□□□ -2.45
PTPN4P29074 MIR181B2-201ENST00000385004 89 ntBASIC-0.24□□□□□ -2.45
PTPN4P29074 RNA5SP25-201ENST00000410815 110 ntBASIC-0.24□□□□□ -2.45
PTPN4P29074 AC109327.2-201ENST00000448339 378 ntBASIC-0.24□□□□□ -2.45
PTPN4P29074 AC068339.1-201ENST00000526965 141 ntBASIC-0.24□□□□□ -2.45
PTPN4P29074 RN7SL660P-201ENST00000614852 299 ntBASIC-0.24□□□□□ -2.45
PTPN4P29074 RNY3P2-201ENST00000362918 102 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 RNU6-832P-201ENST00000363319 107 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 SNORD101-201ENST00000384027 73 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 MIR106A-201ENST00000384870 81 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 SNORD33.1-201ENST00000516213 88 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 RNU7-188P-201ENST00000517063 64 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 MIR3668-201ENST00000582138 75 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 MIR548AE1-201ENST00000583292 70 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 MIR4493-201ENST00000584016 73 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 MIR8064-201ENST00000612863 90 ntBASIC-0.25□□□□□ -2.45
PTPN4P29074 RNU6-664P-201ENST00000362381 107 ntBASIC-0.26□□□□□ -2.45
PTPN4P29074 SNORD114-28-201ENST00000363610 72 ntBASIC-0.26□□□□□ -2.45
PTPN4P29074 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.26□□□□□ -2.45
PTPN4P29074 MIR604-201ENST00000384880 94 ntBASIC-0.26□□□□□ -2.45
PTPN4P29074 RNU6-659P-201ENST00000516454 104 ntBASIC-0.26□□□□□ -2.45
PTPN4P29074 MIR4696-201ENST00000581431 70 ntBASIC-0.26□□□□□ -2.45
PTPN4P29074 SNORA18.1-201ENST00000363418 128 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 RNA5SP368-201ENST00000364298 116 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 U8.6-201ENST00000364939 135 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 MIR548A1-201ENST00000385041 97 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 MIR3613-201ENST00000579844 87 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 U6.95-201ENST00000636931 70 ntBASIC-0.27□□□□□ -2.45
PTPN4P29074 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 SNORD114-15-201ENST00000364687 72 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 RNY4P3-201ENST00000365254 95 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 SNORD50.2-201ENST00000365465 70 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 MIR5009-201ENST00000578736 100 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 RNU6-86P-201ENST00000606534 107 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 AC025521.1-201ENST00000621624 286 ntBASIC-0.28□□□□□ -2.45
PTPN4P29074 SNORD114-29-201ENST00000364819 70 ntBASIC-0.29□□□□□ -2.46
PTPN4P29074 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
PTPN4P29074 MIR548A3-201ENST00000385297 97 ntBASIC-0.29□□□□□ -2.46
PTPN4P29074 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.29□□□□□ -2.46
PTPN4P29074 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.29□□□□□ -2.46
PTPN4P29074 AL670379.3-201ENST00000605040 251 ntBASIC-0.29□□□□□ -2.46
PTPN4P29074 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.29□□□□□ -2.46
PTPN4P29074 MIR101-1-201ENST00000362265 75 ntBASIC-0.3□□□□□ -2.46
PTPN4P29074 RNU6-154P-201ENST00000384306 106 ntBASIC-0.3□□□□□ -2.46
PTPN4P29074 RNU6-935P-201ENST00000410371 100 ntBASIC-0.3□□□□□ -2.46
PTPN4P29074 RNU6-75P-201ENST00000515944 104 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 285 ms