Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MIR502-201ENST00000606349 86 ntBASIC1.65□□□□□ -2.15
NFKB1P19838 RMST_2.1-201ENST00000617263 136 ntBASIC1.65□□□□□ -2.15
NFKB1P19838 SNORD115-24-201ENST00000363528 82 ntBASIC1.64□□□□□ -2.15
NFKB1P19838 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
NFKB1P19838 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
NFKB1P19838 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.64□□□□□ -2.15
NFKB1P19838 U6.111-201ENST00000636093 83 ntBASIC1.64□□□□□ -2.15
NFKB1P19838 Y_RNA.340-201ENST00000365330 92 ntBASIC1.63□□□□□ -2.15
NFKB1P19838 RNU6-1126P-201ENST00000384002 107 ntBASIC1.63□□□□□ -2.15
NFKB1P19838 MIR1265-201ENST00000408444 86 ntBASIC1.63□□□□□ -2.15
NFKB1P19838 RNU7-161P-201ENST00000517289 62 ntBASIC1.63□□□□□ -2.15
NFKB1P19838 MIR4498-201ENST00000577599 66 ntBASIC1.63□□□□□ -2.15
NFKB1P19838 Y_RNA.258-201ENST00000364613 105 ntBASIC1.62□□□□□ -2.15
NFKB1P19838 Y_RNA.355-201ENST00000365462 98 ntBASIC1.62□□□□□ -2.15
NFKB1P19838 RNU6-663P-201ENST00000391105 106 ntBASIC1.62□□□□□ -2.15
NFKB1P19838 MIR548AG2-201ENST00000581228 64 ntBASIC1.62□□□□□ -2.15
NFKB1P19838 MIR3920-201ENST00000581751 86 ntBASIC1.62□□□□□ -2.15
NFKB1P19838 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
NFKB1P19838 SNORA17.3-201ENST00000391159 129 ntBASIC1.61□□□□□ -2.15
NFKB1P19838 AC002429.1-201ENST00000437672 148 ntBASIC1.61□□□□□ -2.15
NFKB1P19838 RNU6-752P-201ENST00000516376 102 ntBASIC1.61□□□□□ -2.15
NFKB1P19838 MIR4773-1-201ENST00000637203 78 ntBASIC1.61□□□□□ -2.15
NFKB1P19838 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
NFKB1P19838 RNU6-382P-201ENST00000365181 106 ntBASIC1.6□□□□□ -2.15
NFKB1P19838 RNU6-800P-201ENST00000384473 103 ntBASIC1.6□□□□□ -2.15
NFKB1P19838 MIR222-201ENST00000384992 110 ntBASIC1.6□□□□□ -2.15
NFKB1P19838 RNU6-274P-201ENST00000459566 107 ntBASIC1.6□□□□□ -2.15
NFKB1P19838 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
NFKB1P19838 RNA5SP190-201ENST00000365222 118 ntBASIC1.59□□□□□ -2.15
NFKB1P19838 MIR216B-201ENST00000390186 82 ntBASIC1.59□□□□□ -2.15
NFKB1P19838 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
NFKB1P19838 MIR8053-201ENST00000613344 75 ntBASIC1.59□□□□□ -2.15
NFKB1P19838 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
NFKB1P19838 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
NFKB1P19838 MIR378A-201ENST00000362177 66 ntBASIC1.58□□□□□ -2.16
NFKB1P19838 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
NFKB1P19838 MIR617-201ENST00000385030 97 ntBASIC1.58□□□□□ -2.16
NFKB1P19838 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
NFKB1P19838 SNORD13-201ENST00000459299 104 ntBASIC1.58□□□□□ -2.16
NFKB1P19838 RNU7-104P-201ENST00000459398 79 ntBASIC1.58□□□□□ -2.16
NFKB1P19838 AL078603.1-201ENST00000603824 313 ntBASIC1.58□□□□□ -2.16
NFKB1P19838 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NFKB1P19838 SNORD45.1-201ENST00000363181 77 ntBASIC1.57□□□□□ -2.16
NFKB1P19838 SNORA25-201ENST00000384384 134 ntBASIC1.57□□□□□ -2.16
NFKB1P19838 SNORD45A-201ENST00000384512 84 ntBASIC1.57□□□□□ -2.16
NFKB1P19838 MIR489-201ENST00000384923 84 ntBASIC1.57□□□□□ -2.16
NFKB1P19838 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.57□□□□□ -2.16
NFKB1P19838 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
NFKB1P19838 AC002350.1-201ENST00000490759 375 ntBASIC1.57□□□□□ -2.16
NFKB1P19838 AL136317.1-201ENST00000612653 226 ntBASIC1.57□□□□□ -2.16
NFKB1P19838 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NFKB1P19838 MIR337-201ENST00000362281 93 ntBASIC1.56□□□□□ -2.16
NFKB1P19838 SNORD115-22-201ENST00000364456 82 ntBASIC1.56□□□□□ -2.16
NFKB1P19838 RNU6-895P-201ENST00000384125 103 ntBASIC1.56□□□□□ -2.16
NFKB1P19838 SNORD75.2-201ENST00000408784 58 ntBASIC1.56□□□□□ -2.16
NFKB1P19838 RNU6-135P-201ENST00000516769 101 ntBASIC1.56□□□□□ -2.16
NFKB1P19838 MIR8070-201ENST00000616510 88 ntBASIC1.56□□□□□ -2.16
NFKB1P19838 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.56□□□□□ -2.16
NFKB1P19838 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
NFKB1P19838 AC244098.3-201ENST00000424803 96 ntBASIC1.55□□□□□ -2.16
NFKB1P19838 RNU7-24P-201ENST00000458867 62 ntBASIC1.55□□□□□ -2.16
NFKB1P19838 RNU6-1110P-201ENST00000516462 101 ntBASIC1.55□□□□□ -2.16
NFKB1P19838 RNU6-881P-201ENST00000516813 102 ntBASIC1.55□□□□□ -2.16
NFKB1P19838 snoU13.31-201ENST00000607291 104 ntBASIC1.55□□□□□ -2.16
NFKB1P19838 AC067863.3-201ENST00000624172 122 ntBASIC1.55□□□□□ -2.16
NFKB1P19838 RNA5SP327-201ENST00000362494 101 ntBASIC1.54□□□□□ -2.16
NFKB1P19838 MIR519E-201ENST00000385075 84 ntBASIC1.54□□□□□ -2.16
NFKB1P19838 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
NFKB1P19838 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NFKB1P19838 RNU6-604P-201ENST00000390917 100 ntBASIC1.54□□□□□ -2.16
NFKB1P19838 Y_RNA.205-201ENST00000364128 113 ntBASIC1.53□□□□□ -2.16
NFKB1P19838 Y_RNA.224-201ENST00000364308 111 ntBASIC1.53□□□□□ -2.16
NFKB1P19838 RNA5SP117-201ENST00000365294 118 ntBASIC1.53□□□□□ -2.16
NFKB1P19838 TRMT112P2-201ENST00000512910 132 ntBASIC1.53□□□□□ -2.16
NFKB1P19838 AC005520.4-201ENST00000604337 90 ntBASIC1.53□□□□□ -2.16
NFKB1P19838 MIR548O2-201ENST00000616090 70 ntBASIC1.53□□□□□ -2.16
NFKB1P19838 RNU6-495P-201ENST00000362995 107 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 RNU6-471P-201ENST00000383944 106 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 MIR499A-201ENST00000384903 122 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 MIR644A-201ENST00000385262 94 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 RNU6-321P-201ENST00000410912 106 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 MIR4639-201ENST00000584938 69 ntBASIC1.52□□□□□ -2.17
NFKB1P19838 SNORD105-201ENST00000386910 85 ntBASIC1.51□□□□□ -2.17
NFKB1P19838 SNORD89-201ENST00000390981 114 ntBASIC1.51□□□□□ -2.17
NFKB1P19838 FABP5P4-201ENST00000437203 171 ntBASIC1.51□□□□□ -2.17
NFKB1P19838 SNORD113.1-201ENST00000363280 73 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 SNORA7.1-201ENST00000363750 139 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 SNORD28-201ENST00000384706 75 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 RNU6-630P-201ENST00000391258 106 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 AL691482.2-201ENST00000457453 84 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 U7.7-201ENST00000459276 60 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 RNU6-469P-201ENST00000516253 101 ntBASIC1.5□□□□□ -2.17
NFKB1P19838 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NFKB1P19838 SNORA25.4-201ENST00000363666 124 ntBASIC1.49□□□□□ -2.17
NFKB1P19838 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
NFKB1P19838 Y_RNA.443-201ENST00000384135 111 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms