Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
LIG1P18858 TRMT112P2-201ENST00000512910 132 ntBASIC1.48□□□□□ -2.17
LIG1P18858 Y_RNA.226-201ENST00000364337 114 ntBASIC1.47□□□□□ -2.17
LIG1P18858 RNU6-523P-201ENST00000516304 54 ntBASIC1.47□□□□□ -2.17
LIG1P18858 RNU6-1110P-201ENST00000516462 101 ntBASIC1.47□□□□□ -2.17
LIG1P18858 Y_RNA.12-201ENST00000362393 112 ntBASIC1.46□□□□□ -2.18
LIG1P18858 MIR3140-201ENST00000583685 90 ntBASIC1.46□□□□□ -2.18
LIG1P18858 AL136317.1-201ENST00000612653 226 ntBASIC1.46□□□□□ -2.18
LIG1P18858 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.46□□□□□ -2.18
LIG1P18858 RNA5SP403-201ENST00000363598 108 ntBASIC1.45□□□□□ -2.18
LIG1P18858 MIR19B1-201ENST00000384829 87 ntBASIC1.45□□□□□ -2.18
LIG1P18858 U3.27-201ENST00000391237 200 ntBASIC1.45□□□□□ -2.18
LIG1P18858 RNU6-321P-201ENST00000410912 106 ntBASIC1.45□□□□□ -2.18
LIG1P18858 RNU6-287P-201ENST00000516230 98 ntBASIC1.45□□□□□ -2.18
LIG1P18858 MIR3134-201ENST00000579433 74 ntBASIC1.45□□□□□ -2.18
LIG1P18858 AL353770.2-201ENST00000620024 78 ntBASIC1.45□□□□□ -2.18
LIG1P18858 SNORA24B-201ENST00000384176 131 ntBASIC1.44□□□□□ -2.18
LIG1P18858 MIR451A-201ENST00000385059 72 ntBASIC1.44□□□□□ -2.18
LIG1P18858 RNU2-59P-201ENST00000410482 191 ntBASIC1.44□□□□□ -2.18
LIG1P18858 FABP5P4-201ENST00000437203 171 ntBASIC1.44□□□□□ -2.18
LIG1P18858 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.44□□□□□ -2.18
LIG1P18858 AC139453.2-201ENST00000487255 133 ntBASIC1.44□□□□□ -2.18
LIG1P18858 SNORD115-24-201ENST00000363528 82 ntBASIC1.43□□□□□ -2.18
LIG1P18858 Y_RNA.327-201ENST00000365201 102 ntBASIC1.43□□□□□ -2.18
LIG1P18858 RNU6-411P-201ENST00000384451 107 ntBASIC1.43□□□□□ -2.18
LIG1P18858 U7.7-201ENST00000459276 60 ntBASIC1.43□□□□□ -2.18
LIG1P18858 AC002350.1-201ENST00000490759 375 ntBASIC1.43□□□□□ -2.18
LIG1P18858 AC097510.1-201ENST00000510945 133 ntBASIC1.43□□□□□ -2.18
LIG1P18858 RNA5SP404-201ENST00000517118 132 ntBASIC1.43□□□□□ -2.18
LIG1P18858 RNU6-1057P-201ENST00000517162 102 ntBASIC1.43□□□□□ -2.18
LIG1P18858 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.43□□□□□ -2.18
LIG1P18858 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LIG1P18858 Y_RNA.606-201ENST00000410579 103 ntBASIC1.42□□□□□ -2.18
LIG1P18858 OR2A41P-201ENST00000473586 105 ntBASIC1.42□□□□□ -2.18
LIG1P18858 RNU7-13P-201ENST00000516413 62 ntBASIC1.42□□□□□ -2.18
LIG1P18858 RNU6-135P-201ENST00000516769 101 ntBASIC1.42□□□□□ -2.18
LIG1P18858 RNU7-161P-201ENST00000517289 62 ntBASIC1.42□□□□□ -2.18
LIG1P18858 MIR4484-201ENST00000582855 83 ntBASIC1.42□□□□□ -2.18
LIG1P18858 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LIG1P18858 RNU6-340P-201ENST00000364005 107 ntBASIC1.41□□□□□ -2.18
LIG1P18858 MIR499A-201ENST00000384903 122 ntBASIC1.41□□□□□ -2.18
LIG1P18858 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
LIG1P18858 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.41□□□□□ -2.18
LIG1P18858 Y_RNA.36-201ENST00000362602 112 ntBASIC1.4□□□□□ -2.19
LIG1P18858 RNA5SP117-201ENST00000365294 118 ntBASIC1.4□□□□□ -2.19
LIG1P18858 MIR200A-201ENST00000384875 90 ntBASIC1.4□□□□□ -2.19
LIG1P18858 SNORD105-201ENST00000386910 85 ntBASIC1.4□□□□□ -2.19
LIG1P18858 SNORD89-201ENST00000390981 114 ntBASIC1.4□□□□□ -2.19
LIG1P18858 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
LIG1P18858 RNU6-1052P-201ENST00000411398 104 ntBASIC1.4□□□□□ -2.19
LIG1P18858 Y_RNA.681-201ENST00000516445 113 ntBASIC1.4□□□□□ -2.19
LIG1P18858 RNU6-719P-201ENST00000516671 104 ntBASIC1.4□□□□□ -2.19
LIG1P18858 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.4□□□□□ -2.19
LIG1P18858 RNU6-681P-201ENST00000364012 104 ntBASIC1.39□□□□□ -2.19
LIG1P18858 RNU6-1126P-201ENST00000384002 107 ntBASIC1.39□□□□□ -2.19
LIG1P18858 MIR942-201ENST00000401111 86 ntBASIC1.39□□□□□ -2.19
LIG1P18858 MIR3920-201ENST00000581751 86 ntBASIC1.39□□□□□ -2.19
LIG1P18858 MIR6078-201ENST00000611069 100 ntBASIC1.39□□□□□ -2.19
LIG1P18858 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.39□□□□□ -2.19
LIG1P18858 Y_RNA.371-201ENST00000365591 113 ntBASIC1.38□□□□□ -2.19
LIG1P18858 MIR2113-201ENST00000459007 91 ntBASIC1.38□□□□□ -2.19
LIG1P18858 RNU6-70P-201ENST00000516438 60 ntBASIC1.38□□□□□ -2.19
LIG1P18858 MIR548AG2-201ENST00000581228 64 ntBASIC1.37□□□□□ -2.19
LIG1P18858 U6.81-201ENST00000612550 106 ntBASIC1.37□□□□□ -2.19
LIG1P18858 RNU6-154P-201ENST00000384306 106 ntBASIC1.36□□□□□ -2.19
LIG1P18858 MIR644A-201ENST00000385262 94 ntBASIC1.36□□□□□ -2.19
LIG1P18858 MIR216B-201ENST00000390186 82 ntBASIC1.36□□□□□ -2.19
LIG1P18858 MIR4639-201ENST00000584938 69 ntBASIC1.36□□□□□ -2.19
LIG1P18858 MIR8070-201ENST00000616510 88 ntBASIC1.36□□□□□ -2.19
LIG1P18858 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LIG1P18858 Y_RNA.118-201ENST00000363300 101 ntBASIC1.35□□□□□ -2.19
LIG1P18858 RNU6-824P-201ENST00000363724 104 ntBASIC1.35□□□□□ -2.19
LIG1P18858 MIR617-201ENST00000385030 97 ntBASIC1.35□□□□□ -2.19
LIG1P18858 RNU6-1177P-201ENST00000391058 104 ntBASIC1.35□□□□□ -2.19
LIG1P18858 RNU7-104P-201ENST00000459398 79 ntBASIC1.35□□□□□ -2.19
LIG1P18858 RNU6-687P-201ENST00000516443 89 ntBASIC1.35□□□□□ -2.19
LIG1P18858 RNU6-1015P-201ENST00000517121 99 ntBASIC1.35□□□□□ -2.19
LIG1P18858 AC067863.3-201ENST00000624172 122 ntBASIC1.35□□□□□ -2.19
LIG1P18858 RNU1-124P-201ENST00000363861 145 ntBASIC1.34□□□□□ -2.19
LIG1P18858 SNORD28-201ENST00000384706 75 ntBASIC1.34□□□□□ -2.19
LIG1P18858 SNORD124-201ENST00000459577 104 ntBASIC1.34□□□□□ -2.19
LIG1P18858 AC114801.3-201ENST00000510231 177 ntBASIC1.34□□□□□ -2.19
LIG1P18858 RNU6-871P-201ENST00000516122 100 ntBASIC1.34□□□□□ -2.19
LIG1P18858 AC025627.3-201ENST00000582078 182 ntBASIC1.34□□□□□ -2.19
LIG1P18858 SNORA8.1-201ENST00000384250 140 ntBASIC1.33□□□□□ -2.2
LIG1P18858 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
LIG1P18858 RNU6-469P-201ENST00000516253 101 ntBASIC1.33□□□□□ -2.2
LIG1P18858 MIR573-201ENST00000384964 99 ntBASIC1.32□□□□□ -2.2
LIG1P18858 RNU6-587P-201ENST00000391282 106 ntBASIC1.32□□□□□ -2.2
LIG1P18858 RNU6-634P-201ENST00000459134 106 ntBASIC1.32□□□□□ -2.2
LIG1P18858 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.32□□□□□ -2.2
LIG1P18858 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
LIG1P18858 AC244669.1-204ENST00000621564 178 ntBASIC1.32□□□□□ -2.2
LIG1P18858 MIR664A-201ENST00000626086 82 ntBASIC1.32□□□□□ -2.2
LIG1P18858 RNU6-330P-201ENST00000363015 107 ntBASIC1.31□□□□□ -2.2
LIG1P18858 Y_RNA.224-201ENST00000364308 111 ntBASIC1.31□□□□□ -2.2
LIG1P18858 RNU6-788P-201ENST00000390967 104 ntBASIC1.31□□□□□ -2.2
LIG1P18858 SNORD41.1-201ENST00000391000 69 ntBASIC1.31□□□□□ -2.2
LIG1P18858 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
LIG1P18858 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms