Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR599-201ENST00000385069 95 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 SNORA31.14-201ENST00000516728 116 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 MIR548AG2-201ENST00000581228 64 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 RNU6-1052P-201ENST00000411398 104 ntBASIC1□□□□□ -2.25
SNHG28P0DPA3 RNU6-719P-201ENST00000516671 104 ntBASIC1□□□□□ -2.25
SNHG28P0DPA3 U7.4-201ENST00000614961 63 ntBASIC1□□□□□ -2.25
SNHG28P0DPA3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1□□□□□ -2.25
SNHG28P0DPA3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
SNHG28P0DPA3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SNHG28P0DPA3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.99□□□□□ -2.25
SNHG28P0DPA3 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
SNHG28P0DPA3 AC097635.1-201ENST00000450678 155 ntBASIC0.99□□□□□ -2.25
SNHG28P0DPA3 AC244505.6-201ENST00000452829 130 ntBASIC0.99□□□□□ -2.25
SNHG28P0DPA3 RNU7-90P-201ENST00000459216 62 ntBASIC0.99□□□□□ -2.25
SNHG28P0DPA3 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
SNHG28P0DPA3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 SNORD101-201ENST00000384027 73 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 RNU6-364P-201ENST00000384387 107 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 MIR548U-201ENST00000390728 81 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 SNORD77.2-201ENST00000391045 68 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 AC074348.1-201ENST00000426503 132 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 FGF7P7-201ENST00000514120 227 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 RNU7-161P-201ENST00000517289 62 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 RMST_2.1-201ENST00000617263 136 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 MIR6788-201ENST00000618842 66 ntBASIC0.98□□□□□ -2.25
SNHG28P0DPA3 RNU6-208P-201ENST00000362431 107 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 MIR1827-201ENST00000408549 66 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 RNU6-977P-201ENST00000516411 103 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 SNORA70.22-201ENST00000517160 124 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 AC138907.6-201ENST00000568401 126 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 AC138869.1-201ENST00000568623 124 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.97□□□□□ -2.25
SNHG28P0DPA3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 RNU6-824P-201ENST00000363724 104 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 MIR520F-201ENST00000384824 87 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 MIR100-201ENST00000385259 80 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 MIR548J-201ENST00000408833 112 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 RNU6-287P-201ENST00000516230 98 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 RNU6-687P-201ENST00000516443 89 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 RNU6-1015P-201ENST00000517121 99 ntBASIC0.96□□□□□ -2.26
SNHG28P0DPA3 RNA5SP403-201ENST00000363598 108 ntBASIC0.95□□□□□ -2.26
SNHG28P0DPA3 MIR644A-201ENST00000385262 94 ntBASIC0.95□□□□□ -2.26
SNHG28P0DPA3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.95□□□□□ -2.26
SNHG28P0DPA3 RNU6-351P-201ENST00000516097 100 ntBASIC0.95□□□□□ -2.26
SNHG28P0DPA3 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
SNHG28P0DPA3 MIR3920-201ENST00000581751 86 ntBASIC0.95□□□□□ -2.26
SNHG28P0DPA3 RNU7-10P-201ENST00000607194 63 ntBASIC0.95□□□□□ -2.26
SNHG28P0DPA3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.94□□□□□ -2.26
SNHG28P0DPA3 SNORA25-201ENST00000384384 134 ntBASIC0.94□□□□□ -2.26
SNHG28P0DPA3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SNHG28P0DPA3 RNU6-994P-201ENST00000410507 111 ntBASIC0.94□□□□□ -2.26
SNHG28P0DPA3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.94□□□□□ -2.26
SNHG28P0DPA3 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
SNHG28P0DPA3 MIR151B-201ENST00000584249 96 ntBASIC0.94□□□□□ -2.26
SNHG28P0DPA3 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
SNHG28P0DPA3 MIR1-1-201ENST00000362147 71 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 RNU6-340P-201ENST00000364005 107 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 Y_RNA.371-201ENST00000365591 113 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 RNU6-154P-201ENST00000384306 106 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 MIR451A-201ENST00000385059 72 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 RNU1-119P-201ENST00000391122 165 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 Y_RNA.660-201ENST00000516002 120 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 RNU6-303P-201ENST00000517091 106 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 YWHAEP2-201ENST00000580066 112 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 YWHAEP3-201ENST00000582767 121 ntBASIC0.93□□□□□ -2.26
SNHG28P0DPA3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SNHG28P0DPA3 SNORD115-24-201ENST00000363528 82 ntBASIC0.92□□□□□ -2.26
SNHG28P0DPA3 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
SNHG28P0DPA3 SNORD115-31-201ENST00000365318 82 ntBASIC0.92□□□□□ -2.26
SNHG28P0DPA3 Y_RNA.545-201ENST00000384652 105 ntBASIC0.92□□□□□ -2.26
SNHG28P0DPA3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SNHG28P0DPA3 SNORD89-201ENST00000390981 114 ntBASIC0.92□□□□□ -2.26
SNHG28P0DPA3 AC002350.1-201ENST00000490759 375 ntBASIC0.92□□□□□ -2.26
SNHG28P0DPA3 SNORD12-201ENST00000391002 90 ntBASIC0.91□□□□□ -2.26
SNHG28P0DPA3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
SNHG28P0DPA3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
SNHG28P0DPA3 RNU6-935P-201ENST00000410371 100 ntBASIC0.91□□□□□ -2.26
SNHG28P0DPA3 AC073261.1-201ENST00000429409 121 ntBASIC0.91□□□□□ -2.26
SNHG28P0DPA3 RNU6-70P-201ENST00000516438 60 ntBASIC0.91□□□□□ -2.26
SNHG28P0DPA3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.91□□□□□ -2.26
SNHG28P0DPA3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SNHG28P0DPA3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.9□□□□□ -2.27
SNHG28P0DPA3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.9□□□□□ -2.27
SNHG28P0DPA3 Y_RNA.606-201ENST00000410579 103 ntBASIC0.9□□□□□ -2.27
SNHG28P0DPA3 U6.81-201ENST00000612550 106 ntBASIC0.9□□□□□ -2.27
SNHG28P0DPA3 Y_RNA.264-201ENST00000364665 102 ntBASIC0.89□□□□□ -2.27
SNHG28P0DPA3 RNU6-540P-201ENST00000384622 101 ntBASIC0.89□□□□□ -2.27
SNHG28P0DPA3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SNHG28P0DPA3 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
SNHG28P0DPA3 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.89□□□□□ -2.27
SNHG28P0DPA3 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
SNHG28P0DPA3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.88□□□□□ -2.27
SNHG28P0DPA3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 RNU6-382P-201ENST00000365181 106 ntBASIC0.88□□□□□ -2.27
SNHG28P0DPA3 RNU6-411P-201ENST00000384451 107 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms