Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.92□□□□□ -2.56
HMGB1P09429 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
HMGB1P09429 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.92□□□□□ -2.56
HMGB1P09429 MIR3144-201ENST00000579460 79 ntBASIC-0.92□□□□□ -2.56
HMGB1P09429 RNA5SP98-201ENST00000363158 137 ntBASIC-0.93□□□□□ -2.56
HMGB1P09429 RNY4P6-201ENST00000363667 96 ntBASIC-0.93□□□□□ -2.56
HMGB1P09429 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.93□□□□□ -2.56
HMGB1P09429 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.93□□□□□ -2.56
HMGB1P09429 MT-TY-201ENST00000387409 66 ntBASIC-0.93□□□□□ -2.56
HMGB1P09429 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.93□□□□□ -2.56
HMGB1P09429 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.94□□□□□ -2.56
HMGB1P09429 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.94□□□□□ -2.56
HMGB1P09429 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.94□□□□□ -2.56
HMGB1P09429 RNU6-182P-201ENST00000516970 105 ntBASIC-0.94□□□□□ -2.56
HMGB1P09429 RNA5SP66-201ENST00000517178 101 ntBASIC-0.94□□□□□ -2.56
HMGB1P09429 MIR5589-201ENST00000579442 60 ntBASIC-0.94□□□□□ -2.56
HMGB1P09429 SNORD114-14-201ENST00000362723 75 ntBASIC-0.95□□□□□ -2.56
HMGB1P09429 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.95□□□□□ -2.56
HMGB1P09429 RNU6-466P-201ENST00000391224 103 ntBASIC-0.95□□□□□ -2.56
HMGB1P09429 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.95□□□□□ -2.56
HMGB1P09429 RNU6-235P-201ENST00000362644 107 ntBASIC-0.96□□□□□ -2.56
HMGB1P09429 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.96□□□□□ -2.56
HMGB1P09429 SNORA3B-201ENST00000391305 131 ntBASIC-0.96□□□□□ -2.56
HMGB1P09429 AL353813.1-201ENST00000440700 253 ntBASIC-0.97□□□□□ -2.56
HMGB1P09429 AC025166.1-201ENST00000612411 163 ntBASIC-0.97□□□□□ -2.56
HMGB1P09429 MIR569-201ENST00000385228 96 ntBASIC-0.98□□□□□ -2.57
HMGB1P09429 RNU6-816P-201ENST00000390914 107 ntBASIC-0.98□□□□□ -2.57
HMGB1P09429 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.98□□□□□ -2.57
HMGB1P09429 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.98□□□□□ -2.57
HMGB1P09429 RNA5SP272-201ENST00000516095 111 ntBASIC-0.98□□□□□ -2.57
HMGB1P09429 AL442128.1-201ENST00000615151 90 ntBASIC-0.98□□□□□ -2.57
HMGB1P09429 MIR604-201ENST00000384880 94 ntBASIC-0.99□□□□□ -2.57
HMGB1P09429 MIR4436A-201ENST00000585278 85 ntBASIC-0.99□□□□□ -2.57
HMGB1P09429 MIR224-201ENST00000384889 81 ntBASIC-1□□□□□ -2.57
HMGB1P09429 MT-TQ-201ENST00000387372 72 ntBASIC-1□□□□□ -2.57
HMGB1P09429 MIR1912-201ENST00000410389 80 ntBASIC-1□□□□□ -2.57
HMGB1P09429 SNORD101-201ENST00000384027 73 ntBASIC-1.01□□□□□ -2.57
HMGB1P09429 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.01□□□□□ -2.57
HMGB1P09429 AC093726.3-201ENST00000637588 150 ntBASIC-1.01□□□□□ -2.57
HMGB1P09429 MIR539-201ENST00000365690 78 ntBASIC-1.02□□□□□ -2.57
HMGB1P09429 MIR4636-201ENST00000582271 80 ntBASIC-1.02□□□□□ -2.57
HMGB1P09429 RNU6-455P-201ENST00000384681 107 ntBASIC-1.03□□□□□ -2.57
HMGB1P09429 RNU6-175P-201ENST00000516896 107 ntBASIC-1.03□□□□□ -2.57
HMGB1P09429 MTND5P18-201ENST00000445624 1801 ntBASIC-1.03□□□□□ -2.57
HMGB1P09429 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.04□□□□□ -2.58
HMGB1P09429 RNA5SP169-201ENST00000517268 117 ntBASIC-1.04□□□□□ -2.58
HMGB1P09429 MIR20A-201ENST00000362279 71 ntBASIC-1.05□□□□□ -2.58
HMGB1P09429 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.05□□□□□ -2.58
HMGB1P09429 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.05□□□□□ -2.58
HMGB1P09429 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.06□□□□□ -2.58
HMGB1P09429 SNORD58C-201ENST00000365223 64 ntBASIC-1.06□□□□□ -2.58
HMGB1P09429 RNU4-63P-201ENST00000411313 118 ntBASIC-1.06□□□□□ -2.58
HMGB1P09429 snoU13.11-201ENST00000459219 104 ntBASIC-1.06□□□□□ -2.58
HMGB1P09429 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.06□□□□□ -2.58
HMGB1P09429 RNU6-664P-201ENST00000362381 107 ntBASIC-1.07□□□□□ -2.58
HMGB1P09429 RNU6-426P-201ENST00000516464 97 ntBASIC-1.07□□□□□ -2.58
HMGB1P09429 MTND5P41-201ENST00000517498 206 ntBASIC-1.07□□□□□ -2.58
HMGB1P09429 AC007012.1-201ENST00000567192 175 ntBASIC-1.07□□□□□ -2.58
HMGB1P09429 MIR4696-201ENST00000581431 70 ntBASIC-1.07□□□□□ -2.58
HMGB1P09429 AC108676.2-201ENST00000605225 163 ntBASIC-1.07□□□□□ -2.58
HMGB1P09429 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.08□□□□□ -2.58
HMGB1P09429 MIR204-201ENST00000385200 110 ntBASIC-1.08□□□□□ -2.58
HMGB1P09429 MIR216B-201ENST00000390186 82 ntBASIC-1.08□□□□□ -2.58
HMGB1P09429 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.09□□□□□ -2.58
HMGB1P09429 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.09□□□□□ -2.58
HMGB1P09429 MIR652-201ENST00000385278 98 ntBASIC-1.09□□□□□ -2.58
HMGB1P09429 AC021146.6-201ENST00000514659 117 ntBASIC-1.09□□□□□ -2.58
HMGB1P09429 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.1□□□□□ -2.59
HMGB1P09429 AL445193.1-201ENST00000441183 141 ntBASIC-1.1□□□□□ -2.59
HMGB1P09429 RNU6-758P-201ENST00000516292 89 ntBASIC-1.1□□□□□ -2.59
HMGB1P09429 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.1□□□□□ -2.59
HMGB1P09429 RNY1P7-201ENST00000384743 110 ntBASIC-1.11□□□□□ -2.59
HMGB1P09429 MIR9-2-201ENST00000384838 87 ntBASIC-1.11□□□□□ -2.59
HMGB1P09429 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.11□□□□□ -2.59
HMGB1P09429 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.12□□□□□ -2.59
HMGB1P09429 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.12□□□□□ -2.59
HMGB1P09429 RNA5SP368-201ENST00000364298 116 ntBASIC-1.13□□□□□ -2.59
HMGB1P09429 AP000676.1-201ENST00000533307 52 ntBASIC-1.13□□□□□ -2.59
HMGB1P09429 SNORD95.1-201ENST00000364099 68 ntBASIC-1.14□□□□□ -2.59
HMGB1P09429 RNU6-886P-201ENST00000384319 105 ntBASIC-1.14□□□□□ -2.59
HMGB1P09429 RNU6-935P-201ENST00000410371 100 ntBASIC-1.14□□□□□ -2.59
HMGB1P09429 AC244090.1-201ENST00000441884 93 ntBASIC-1.14□□□□□ -2.59
HMGB1P09429 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.15□□□□□ -2.59
HMGB1P09429 RNU6-901P-201ENST00000384593 106 ntBASIC-1.15□□□□□ -2.59
HMGB1P09429 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.16□□□□□ -2.6
HMGB1P09429 RNU6-900P-201ENST00000384498 102 ntBASIC-1.17□□□□□ -2.6
HMGB1P09429 SNORD56B-201ENST00000384713 71 ntBASIC-1.17□□□□□ -2.6
HMGB1P09429 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.17□□□□□ -2.6
HMGB1P09429 RNU6-881P-201ENST00000516813 102 ntBASIC-1.17□□□□□ -2.6
HMGB1P09429 MIR548O2-201ENST00000616090 70 ntBASIC-1.17□□□□□ -2.6
HMGB1P09429 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.18□□□□□ -2.6
HMGB1P09429 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.18□□□□□ -2.6
HMGB1P09429 Z95118.1-201ENST00000421372 247 ntBASIC-1.18□□□□□ -2.6
HMGB1P09429 MTND4LP9-201ENST00000427694 174 ntBASIC-1.18□□□□□ -2.6
HMGB1P09429 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.18□□□□□ -2.6
HMGB1P09429 MIR4280-201ENST00000582178 76 ntBASIC-1.18□□□□□ -2.6
HMGB1P09429 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.19□□□□□ -2.6
HMGB1P09429 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.19□□□□□ -2.6
HMGB1P09429 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.2□□□□□ -2.6
HMGB1P09429 MIR451A-201ENST00000385059 72 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms