Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNU6-776P-201ENST00000364403 104 ntBASIC1.28□□□□□ -2.2
SYPP08247 RNU6-1022P-201ENST00000365049 104 ntBASIC1.28□□□□□ -2.2
SYPP08247 MIR200A-201ENST00000384875 90 ntBASIC1.28□□□□□ -2.2
SYPP08247 RNU6-935P-201ENST00000410371 100 ntBASIC1.28□□□□□ -2.2
SYPP08247 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.28□□□□□ -2.2
SYPP08247 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
SYPP08247 SNORD115-24-201ENST00000363528 82 ntBASIC1.27□□□□□ -2.21
SYPP08247 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
SYPP08247 RNU6-208P-201ENST00000362431 107 ntBASIC1.26□□□□□ -2.21
SYPP08247 Y_RNA.264-201ENST00000364665 102 ntBASIC1.26□□□□□ -2.21
SYPP08247 MIR942-201ENST00000401111 86 ntBASIC1.26□□□□□ -2.21
SYPP08247 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
SYPP08247 RNA5SP480-201ENST00000516840 109 ntBASIC1.26□□□□□ -2.21
SYPP08247 RNU7-161P-201ENST00000517289 62 ntBASIC1.26□□□□□ -2.21
SYPP08247 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.26□□□□□ -2.21
SYPP08247 AC145423.2-201ENST00000610631 239 ntBASIC1.26□□□□□ -2.21
SYPP08247 RNU6-1229P-201ENST00000364295 107 ntBASIC1.25□□□□□ -2.21
SYPP08247 RNU1-93P-201ENST00000364704 169 ntBASIC1.25□□□□□ -2.21
SYPP08247 RNA5SP117-201ENST00000365294 118 ntBASIC1.25□□□□□ -2.21
SYPP08247 SNORD115-44-201ENST00000365391 82 ntBASIC1.25□□□□□ -2.21
SYPP08247 snoU13.17-201ENST00000458802 104 ntBASIC1.25□□□□□ -2.21
SYPP08247 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
SYPP08247 MIR3140-201ENST00000583685 90 ntBASIC1.25□□□□□ -2.21
SYPP08247 MIR6515-201ENST00000619843 57 ntBASIC1.25□□□□□ -2.21
SYPP08247 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
SYPP08247 RNU5F-1-201ENST00000362507 117 ntBASIC1.24□□□□□ -2.21
SYPP08247 RNU1-124P-201ENST00000363861 145 ntBASIC1.24□□□□□ -2.21
SYPP08247 RNY4P3-201ENST00000365254 95 ntBASIC1.24□□□□□ -2.21
SYPP08247 Y_RNA.532-201ENST00000384590 113 ntBASIC1.24□□□□□ -2.21
SYPP08247 Y_RNA.540-201ENST00000384638 111 ntBASIC1.24□□□□□ -2.21
SYPP08247 MIR451A-201ENST00000385059 72 ntBASIC1.24□□□□□ -2.21
SYPP08247 RNU6-380P-201ENST00000410207 107 ntBASIC1.24□□□□□ -2.21
SYPP08247 RNU6-287P-201ENST00000516230 98 ntBASIC1.24□□□□□ -2.21
SYPP08247 RNU7-13P-201ENST00000516413 62 ntBASIC1.24□□□□□ -2.21
SYPP08247 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
SYPP08247 AC022709.1-201ENST00000615967 87 ntBASIC1.24□□□□□ -2.21
SYPP08247 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
SYPP08247 MIR644A-201ENST00000385262 94 ntBASIC1.23□□□□□ -2.21
SYPP08247 MIR889-201ENST00000401280 79 ntBASIC1.23□□□□□ -2.21
SYPP08247 RNU6-135P-201ENST00000516769 101 ntBASIC1.23□□□□□ -2.21
SYPP08247 RNU6-1223P-201ENST00000517124 104 ntBASIC1.23□□□□□ -2.21
SYPP08247 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.23□□□□□ -2.21
SYPP08247 U7.4-201ENST00000614961 63 ntBASIC1.23□□□□□ -2.21
SYPP08247 RNU6-1335P-201ENST00000365426 107 ntBASIC1.22□□□□□ -2.21
SYPP08247 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
SYPP08247 MIR573-201ENST00000384964 99 ntBASIC1.22□□□□□ -2.21
SYPP08247 MIR3920-201ENST00000581751 86 ntBASIC1.22□□□□□ -2.21
SYPP08247 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.21
SYPP08247 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
SYPP08247 RNU6-1126P-201ENST00000384002 107 ntBASIC1.21□□□□□ -2.22
SYPP08247 SNORA24B-201ENST00000384176 131 ntBASIC1.21□□□□□ -2.22
SYPP08247 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
SYPP08247 MIR2113-201ENST00000459007 91 ntBASIC1.21□□□□□ -2.22
SYPP08247 RNU7-104P-201ENST00000459398 79 ntBASIC1.21□□□□□ -2.22
SYPP08247 RPS29P1-201ENST00000465274 159 ntBASIC1.21□□□□□ -2.22
SYPP08247 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
SYPP08247 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
SYPP08247 MIR548AG2-201ENST00000581228 64 ntBASIC1.21□□□□□ -2.22
SYPP08247 MIR151B-201ENST00000584249 96 ntBASIC1.21□□□□□ -2.22
SYPP08247 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
SYPP08247 Y_RNA.788-201ENST00000622394 112 ntBASIC1.21□□□□□ -2.22
SYPP08247 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.21□□□□□ -2.22
SYPP08247 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
SYPP08247 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
SYPP08247 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.2□□□□□ -2.22
SYPP08247 SCARNA18B-201ENST00000458806 135 ntBASIC1.2□□□□□ -2.22
SYPP08247 RNA5SP255-201ENST00000516370 107 ntBASIC1.2□□□□□ -2.22
SYPP08247 RNU6-1057P-201ENST00000517162 102 ntBASIC1.2□□□□□ -2.22
SYPP08247 AC025627.3-201ENST00000582078 182 ntBASIC1.2□□□□□ -2.22
SYPP08247 MIR4639-201ENST00000584938 69 ntBASIC1.2□□□□□ -2.22
SYPP08247 MIR6788-201ENST00000618842 66 ntBASIC1.2□□□□□ -2.22
SYPP08247 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
SYPP08247 Y_RNA.12-201ENST00000362393 112 ntBASIC1.19□□□□□ -2.22
SYPP08247 SNORD114-27-201ENST00000363766 70 ntBASIC1.19□□□□□ -2.22
SYPP08247 SNORD28-201ENST00000384706 75 ntBASIC1.19□□□□□ -2.22
SYPP08247 RNU6-1052P-201ENST00000411398 104 ntBASIC1.19□□□□□ -2.22
SYPP08247 RNU6-469P-201ENST00000516253 101 ntBASIC1.19□□□□□ -2.22
SYPP08247 RNU6-719P-201ENST00000516671 104 ntBASIC1.19□□□□□ -2.22
SYPP08247 RNU6-303P-201ENST00000517091 106 ntBASIC1.19□□□□□ -2.22
SYPP08247 YWHAEP2-201ENST00000580066 112 ntBASIC1.19□□□□□ -2.22
SYPP08247 YWHAEP3-201ENST00000582767 121 ntBASIC1.19□□□□□ -2.22
SYPP08247 SNORD114-26-201ENST00000363543 72 ntBASIC1.18□□□□□ -2.22
SYPP08247 SNORD18A-201ENST00000363753 72 ntBASIC1.18□□□□□ -2.22
SYPP08247 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SYPP08247 U3.27-201ENST00000391237 200 ntBASIC1.18□□□□□ -2.22
SYPP08247 AC074348.1-201ENST00000426503 132 ntBASIC1.18□□□□□ -2.22
SYPP08247 MIR3612-201ENST00000579753 87 ntBASIC1.18□□□□□ -2.22
SYPP08247 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.18□□□□□ -2.22
SYPP08247 AC244669.1-204ENST00000621564 178 ntBASIC1.18□□□□□ -2.22
SYPP08247 AC067863.3-201ENST00000624172 122 ntBASIC1.18□□□□□ -2.22
SYPP08247 MIR1297-201ENST00000637311 77 ntBASIC1.18□□□□□ -2.22
SYPP08247 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
SYPP08247 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
SYPP08247 RNU6-807P-201ENST00000516805 107 ntBASIC1.17□□□□□ -2.22
SYPP08247 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYPP08247 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
SYPP08247 MIR598-201ENST00000384868 97 ntBASIC1.16□□□□□ -2.22
SYPP08247 MIR617-201ENST00000385030 97 ntBASIC1.16□□□□□ -2.22
SYPP08247 RNU2-59P-201ENST00000410482 191 ntBASIC1.16□□□□□ -2.22
SYPP08247 AC097510.1-201ENST00000510945 133 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 423.5 ms