Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
MMP1P03956 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.13□□□□□ -2.43
MMP1P03956 AC069503.3-201ENST00000618674 145 ntBASIC-0.13□□□□□ -2.43
MMP1P03956 MIR3914-2-201ENST00000637339 95 ntBASIC-0.13□□□□□ -2.43
MMP1P03956 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 MIR539-201ENST00000365690 78 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 SNORA75.1-201ENST00000391130 148 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 AC007012.1-201ENST00000567192 175 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 MIR3613-201ENST00000579844 87 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
MMP1P03956 SNORD114-31-201ENST00000363219 75 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 RNU6-209P-201ENST00000384118 107 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 RNU6-80P-201ENST00000384195 107 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 MIR516B1-201ENST00000385211 90 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 snoU13.11-201ENST00000459219 104 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 SNORD33.1-201ENST00000516213 88 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 RNU6-659P-201ENST00000516454 104 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 YWHAEP2-201ENST00000580066 112 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 MIR548AE1-201ENST00000583292 70 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 MIR4473-201ENST00000583731 91 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.15□□□□□ -2.43
MMP1P03956 AC084368.1-201ENST00000620935 65 ntBASIC-0.15□□□□□ -2.43
MMP1P03956 RNU6-832P-201ENST00000363319 107 ntBASIC-0.16□□□□□ -2.44
MMP1P03956 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.16□□□□□ -2.44
MMP1P03956 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.16□□□□□ -2.44
MMP1P03956 MIR4694-201ENST00000578534 80 ntBASIC-0.16□□□□□ -2.44
MMP1P03956 RN7SL660P-201ENST00000614852 299 ntBASIC-0.16□□□□□ -2.44
MMP1P03956 MIR6514-201ENST00000622549 70 ntBASIC-0.16□□□□□ -2.44
MMP1P03956 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 MIR181B2-201ENST00000385004 89 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 MT-TY-201ENST00000387409 66 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 AC068339.1-201ENST00000526965 141 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 CR383656.4-201ENST00000546909 122 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 MIR4460-201ENST00000577862 86 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 MIR4696-201ENST00000581431 70 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.17□□□□□ -2.44
MMP1P03956 RNY3P2-201ENST00000362918 102 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 RNA5SP98-201ENST00000363158 137 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 MIR106A-201ENST00000384870 81 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 AC109327.2-201ENST00000448339 378 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 MIR3133-201ENST00000583157 78 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 AC025521.1-201ENST00000621624 286 ntBASIC-0.18□□□□□ -2.44
MMP1P03956 U8.6-201ENST00000364939 135 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 SNORD50.2-201ENST00000365465 70 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 MIR548A1-201ENST00000385041 97 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 MIR214-201ENST00000385214 110 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 MT-TR-201ENST00000387439 65 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 RNU6-75P-201ENST00000515944 104 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 RNU6-758P-201ENST00000516292 89 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 RNU7-188P-201ENST00000517063 64 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 MIR3668-201ENST00000582138 75 ntBASIC-0.19□□□□□ -2.44
MMP1P03956 MIR148A-201ENST00000362215 68 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 RNU6-664P-201ENST00000362381 107 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 RNU6-774P-201ENST00000363238 107 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 SNORD101-201ENST00000384027 73 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 RNU6-480P-201ENST00000384332 107 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 RNU6-466P-201ENST00000391224 103 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 MIR5009-201ENST00000578736 100 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 MIR4493-201ENST00000584016 73 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 AC096720.1-201ENST00000604441 183 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 RNU6-86P-201ENST00000606534 107 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 uc_338.10-201ENST00000621872 182 ntBASIC-0.2□□□□□ -2.44
MMP1P03956 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 AC104692.1-201ENST00000472406 90 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 RNU6-175P-201ENST00000516896 107 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 AP001180.6-201ENST00000584918 159 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 AL670379.3-201ENST00000605040 251 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 U6.95-201ENST00000636931 70 ntBASIC-0.21□□□□□ -2.44
MMP1P03956 RNU6-46P-201ENST00000383860 107 ntBASIC-0.22□□□□□ -2.44
MMP1P03956 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.22□□□□□ -2.44
MMP1P03956 MIR6507-201ENST00000613630 70 ntBASIC-0.22□□□□□ -2.44
MMP1P03956 RNU6-704P-201ENST00000364162 103 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 SNORD116-14-201ENST00000383894 92 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 SNORD116-17-201ENST00000383929 92 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 RNU6-746P-201ENST00000384112 109 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 RNU6-154P-201ENST00000384306 106 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 SNORD116-15-201ENST00000384445 92 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 SNORD116-19-201ENST00000384729 92 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 MIR548A3-201ENST00000385297 97 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 RNU7-85P-201ENST00000458851 63 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 AL513043.2-201ENST00000573941 143 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 MIR548O2-201ENST00000616090 70 ntBASIC-0.23□□□□□ -2.45
MMP1P03956 MIR655-201ENST00000362159 97 ntBASIC-0.24□□□□□ -2.45
MMP1P03956 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms