Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC027335.2-201ENST00000624030 375 ntBASIC2.12□□□□□ -2.07
ALDH1A1P00352 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
ALDH1A1P00352 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ALDH1A1P00352 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.11□□□□□ -2.07
ALDH1A1P00352 RNU6-369P-201ENST00000362515 102 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 RNU6-645P-201ENST00000364649 106 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 SNORA75.2-201ENST00000391138 150 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 SNORA75.3-201ENST00000391231 150 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 MIR938-201ENST00000401216 83 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 RNU7-102P-201ENST00000458948 62 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 RNU7-95P-201ENST00000459222 64 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 MIR6504-201ENST00000613520 61 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 AC106800.4-201ENST00000614905 153 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 MIR548O2-201ENST00000616090 70 ntBASIC2.11□□□□□ -2.07
ALDH1A1P00352 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ALDH1A1P00352 SNORD111-201ENST00000408139 94 ntBASIC2.1□□□□□ -2.07
ALDH1A1P00352 AC019176.1-201ENST00000518519 225 ntBASIC2.1□□□□□ -2.07
ALDH1A1P00352 MIR3657-201ENST00000584818 117 ntBASIC2.1□□□□□ -2.07
ALDH1A1P00352 MIR7978-201ENST00000636158 59 ntBASIC2.1□□□□□ -2.07
ALDH1A1P00352 RNU6-392P-201ENST00000364926 101 ntBASIC2.09□□□□□ -2.07
ALDH1A1P00352 MIR1276-201ENST00000408707 83 ntBASIC2.09□□□□□ -2.07
ALDH1A1P00352 AC104435.1-201ENST00000483483 166 ntBASIC2.09□□□□□ -2.07
ALDH1A1P00352 Y_RNA.327-201ENST00000365201 102 ntBASIC2.08□□□□□ -2.08
ALDH1A1P00352 MIR617-201ENST00000385030 97 ntBASIC2.08□□□□□ -2.08
ALDH1A1P00352 snoU13.9-201ENST00000458927 103 ntBASIC2.08□□□□□ -2.08
ALDH1A1P00352 AC048334.1-201ENST00000477975 159 ntBASIC2.08□□□□□ -2.08
ALDH1A1P00352 AC079140.2-201ENST00000506193 142 ntBASIC2.08□□□□□ -2.08
ALDH1A1P00352 Y_RNA.722-201ENST00000517279 114 ntBASIC2.08□□□□□ -2.08
ALDH1A1P00352 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ALDH1A1P00352 Y_RNA.32-201ENST00000362589 110 ntBASIC2.07□□□□□ -2.08
ALDH1A1P00352 SNORD115-24-201ENST00000363528 82 ntBASIC2.07□□□□□ -2.08
ALDH1A1P00352 RNU6-54P-201ENST00000365563 107 ntBASIC2.07□□□□□ -2.08
ALDH1A1P00352 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
ALDH1A1P00352 RNU7-161P-201ENST00000517289 62 ntBASIC2.07□□□□□ -2.08
ALDH1A1P00352 uc_338.16-201ENST00000621804 95 ntBASIC2.07□□□□□ -2.08
ALDH1A1P00352 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
ALDH1A1P00352 RNU6-1335P-201ENST00000365426 107 ntBASIC2.06□□□□□ -2.08
ALDH1A1P00352 Y_RNA.363-201ENST00000365529 113 ntBASIC2.06□□□□□ -2.08
ALDH1A1P00352 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
ALDH1A1P00352 SNORA31.14-201ENST00000516728 116 ntBASIC2.06□□□□□ -2.08
ALDH1A1P00352 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
ALDH1A1P00352 MIR4804-201ENST00000581683 73 ntBASIC2.06□□□□□ -2.08
ALDH1A1P00352 SNORD33-201ENST00000362761 85 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 RNU6-260P-201ENST00000384092 107 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 RNU6-1065P-201ENST00000384513 106 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 MIR7-2-201ENST00000384970 110 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 RNA5SP299-201ENST00000391203 116 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 RNU7-56P-201ENST00000458744 62 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 AL512310.8-201ENST00000550183 120 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 AC023827.1-201ENST00000569247 97 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
ALDH1A1P00352 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
ALDH1A1P00352 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ALDH1A1P00352 SNORD113-4-201ENST00000364802 75 ntBASIC2.04□□□□□ -2.08
ALDH1A1P00352 MIR519E-201ENST00000385075 84 ntBASIC2.04□□□□□ -2.08
ALDH1A1P00352 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ALDH1A1P00352 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
ALDH1A1P00352 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ALDH1A1P00352 AC067940.1-201ENST00000458411 300 ntBASIC2.04□□□□□ -2.08
ALDH1A1P00352 SNORD42B-201ENST00000458893 67 ntBASIC2.04□□□□□ -2.08
ALDH1A1P00352 SNORA40.17-201ENST00000517256 115 ntBASIC2.04□□□□□ -2.08
ALDH1A1P00352 RNA5SP215-201ENST00000363440 122 ntBASIC2.03□□□□□ -2.08
ALDH1A1P00352 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
ALDH1A1P00352 RNU6-122P-201ENST00000516818 107 ntBASIC2.03□□□□□ -2.08
ALDH1A1P00352 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
ALDH1A1P00352 MIR3937-201ENST00000580135 106 ntBASIC2.03□□□□□ -2.08
ALDH1A1P00352 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
ALDH1A1P00352 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
ALDH1A1P00352 RNU6-808P-201ENST00000391233 108 ntBASIC2.02□□□□□ -2.09
ALDH1A1P00352 RNU6-656P-201ENST00000516785 107 ntBASIC2.02□□□□□ -2.09
ALDH1A1P00352 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ALDH1A1P00352 Y_RNA.174-201ENST00000363781 105 ntBASIC2.01□□□□□ -2.09
ALDH1A1P00352 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
ALDH1A1P00352 SNORA31.2-201ENST00000516019 134 ntBASIC2.01□□□□□ -2.09
ALDH1A1P00352 SNORD53B-201ENST00000577887 78 ntBASIC2.01□□□□□ -2.09
ALDH1A1P00352 MIR3938-201ENST00000582157 103 ntBASIC2.01□□□□□ -2.09
ALDH1A1P00352 SNORA2.1-201ENST00000363089 137 ntBASIC2□□□□□ -2.09
ALDH1A1P00352 RNU6-42P-201ENST00000384165 107 ntBASIC2□□□□□ -2.09
ALDH1A1P00352 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
ALDH1A1P00352 RNU1-119P-201ENST00000391122 165 ntBASIC2□□□□□ -2.09
ALDH1A1P00352 RNU7-21P-201ENST00000459430 62 ntBASIC2□□□□□ -2.09
ALDH1A1P00352 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ALDH1A1P00352 RNU6-936P-201ENST00000384005 107 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 RNU6V-201ENST00000384105 107 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 MIR30A-201ENST00000385092 71 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
ALDH1A1P00352 RNU1-123P-201ENST00000458950 160 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 RNU7-104P-201ENST00000459398 79 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 RNU6-1089P-201ENST00000516473 104 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 RNU6-92P-201ENST00000605893 104 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 MIR6739-201ENST00000622461 75 ntBASIC1.99□□□□□ -2.09
ALDH1A1P00352 RNU6-1184P-201ENST00000384588 108 ntBASIC1.98□□□□□ -2.09
ALDH1A1P00352 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
ALDH1A1P00352 AL591704.2-201ENST00000421658 181 ntBASIC1.98□□□□□ -2.09
ALDH1A1P00352 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
ALDH1A1P00352 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.98□□□□□ -2.09
ALDH1A1P00352 AL157834.3-201ENST00000615543 103 ntBASIC1.98□□□□□ -2.09
ALDH1A1P00352 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
ALDH1A1P00352 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
ALDH1A1P00352 Y_RNA.540-201ENST00000384638 111 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 239.7 ms