Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.03□□□□□ -2.24
TOP3BO95985 RNU7-56P-201ENST00000458744 62 ntBASIC1.03□□□□□ -2.24
TOP3BO95985 Y_RNA.809-201ENST00000516058 95 ntBASIC1.03□□□□□ -2.24
TOP3BO95985 RNA5SP330-201ENST00000517096 96 ntBASIC1.03□□□□□ -2.24
TOP3BO95985 AC008608.1-201ENST00000603910 127 ntBASIC1.03□□□□□ -2.24
TOP3BO95985 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TOP3BO95985 RNU6-957P-201ENST00000363652 99 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 RNU6-652P-201ENST00000365488 107 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TOP3BO95985 RNU6-811P-201ENST00000384069 107 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 RNU6-291P-201ENST00000384720 107 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 RNU6-535P-201ENST00000384722 107 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 MIR1827-201ENST00000408549 66 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 AC097635.1-201ENST00000450678 155 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 AC067940.1-201ENST00000458411 300 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 AC140658.3-201ENST00000567603 271 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 AC010487.4-201ENST00000637027 61 ntBASIC1.02□□□□□ -2.25
TOP3BO95985 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.02□□□□□ -2.25
TOP3BO95985 Y_RNA.258-201ENST00000364613 105 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 Y_RNA.316-201ENST00000365118 111 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 MIR520F-201ENST00000384824 87 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 RNU1-119P-201ENST00000391122 165 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 AC138907.6-201ENST00000568401 126 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 AC138869.1-201ENST00000568623 124 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 MIR4714-201ENST00000580728 77 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 MIR6086-201ENST00000638065 55 ntBASIC1.01□□□□□ -2.25
TOP3BO95985 RNA5SP245-201ENST00000364239 121 ntBASIC1□□□□□ -2.25
TOP3BO95985 RNU6-132P-201ENST00000383863 107 ntBASIC1□□□□□ -2.25
TOP3BO95985 MIR599-201ENST00000385069 95 ntBASIC1□□□□□ -2.25
TOP3BO95985 RNA5SP292-201ENST00000390974 118 ntBASIC1□□□□□ -2.25
TOP3BO95985 RNU6-279P-201ENST00000391297 101 ntBASIC1□□□□□ -2.25
TOP3BO95985 AL606490.4-201ENST00000423117 127 ntBASIC1□□□□□ -2.25
TOP3BO95985 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
TOP3BO95985 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
TOP3BO95985 SNORA25.13-201ENST00000516395 103 ntBASIC1□□□□□ -2.25
TOP3BO95985 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1□□□□□ -2.25
TOP3BO95985 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
TOP3BO95985 MIR3064-201ENST00000581130 66 ntBASIC1□□□□□ -2.25
TOP3BO95985 TRDV1-202ENST00000621643 102 ntBASIC1□□□□□ -2.25
TOP3BO95985 SNORD114-24-201ENST00000365029 72 ntBASIC0.99□□□□□ -2.25
TOP3BO95985 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
TOP3BO95985 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.99□□□□□ -2.25
TOP3BO95985 MIR4796-201ENST00000580742 81 ntBASIC0.99□□□□□ -2.25
TOP3BO95985 AC104996.3-201ENST00000590718 94 ntBASIC0.99□□□□□ -2.25
TOP3BO95985 MIRLET7F1-201ENST00000362202 87 ntBASIC0.98□□□□□ -2.25
TOP3BO95985 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
TOP3BO95985 MIR548U-201ENST00000390728 81 ntBASIC0.98□□□□□ -2.25
TOP3BO95985 Y_RNA.32-201ENST00000362589 110 ntBASIC0.97□□□□□ -2.25
TOP3BO95985 Y_RNA.491-201ENST00000384417 107 ntBASIC0.97□□□□□ -2.25
TOP3BO95985 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
TOP3BO95985 AC244505.6-201ENST00000452829 130 ntBASIC0.97□□□□□ -2.25
TOP3BO95985 RNU6-857P-201ENST00000515893 110 ntBASIC0.97□□□□□ -2.25
TOP3BO95985 SNORA18.5-201ENST00000516616 101 ntBASIC0.97□□□□□ -2.25
TOP3BO95985 MIR8087-201ENST00000612745 78 ntBASIC0.97□□□□□ -2.25
TOP3BO95985 Y_RNA.94-201ENST00000363068 106 ntBASIC0.96□□□□□ -2.26
TOP3BO95985 SNORD114-23-201ENST00000363536 72 ntBASIC0.96□□□□□ -2.26
TOP3BO95985 SNORD89-201ENST00000390981 114 ntBASIC0.96□□□□□ -2.26
TOP3BO95985 AL136317.1-201ENST00000612653 226 ntBASIC0.96□□□□□ -2.26
TOP3BO95985 uc_338.16-201ENST00000621804 95 ntBASIC0.96□□□□□ -2.26
TOP3BO95985 U6.100-201ENST00000636230 99 ntBASIC0.96□□□□□ -2.26
TOP3BO95985 RNU6-624P-201ENST00000363411 107 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 MIR520H-201ENST00000385126 88 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TOP3BO95985 U7.7-201ENST00000459276 60 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 RNU6-1265P-201ENST00000516342 103 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 RNU6-1110P-201ENST00000516462 101 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 SNORA31.14-201ENST00000516728 116 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 MIR4712-201ENST00000583750 82 ntBASIC0.95□□□□□ -2.26
TOP3BO95985 MIR330-201ENST00000362196 94 ntBASIC0.94□□□□□ -2.26
TOP3BO95985 Y_RNA.244-201ENST00000364484 109 ntBASIC0.94□□□□□ -2.26
TOP3BO95985 RNU6-24P-201ENST00000384440 107 ntBASIC0.94□□□□□ -2.26
TOP3BO95985 RNU6-129P-201ENST00000391022 107 ntBASIC0.94□□□□□ -2.26
TOP3BO95985 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
TOP3BO95985 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
TOP3BO95985 MTRNR2L2-201ENST00000604882 87 ntBASIC0.94□□□□□ -2.26
TOP3BO95985 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
TOP3BO95985 RNU6-664P-201ENST00000362381 107 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 Y_RNA.174-201ENST00000363781 105 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 RNU6-478P-201ENST00000363904 110 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 Y_RNA.221-201ENST00000364248 96 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 SNORD101-201ENST00000384027 73 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 MIR936-201ENST00000401264 98 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 Y_RNA.596-201ENST00000410462 109 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 AL450471.1-201ENST00000447509 127 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 MIR4696-201ENST00000581431 70 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 MIR6513-201ENST00000621188 64 ntBASIC0.93□□□□□ -2.26
TOP3BO95985 SNORA63.2-201ENST00000362603 126 ntBASIC0.92□□□□□ -2.26
TOP3BO95985 RNU6-315P-201ENST00000362666 107 ntBASIC0.92□□□□□ -2.26
TOP3BO95985 Y_RNA.239-201ENST00000364444 113 ntBASIC0.92□□□□□ -2.26
TOP3BO95985 RNU6-716P-201ENST00000365621 103 ntBASIC0.92□□□□□ -2.26
TOP3BO95985 SNORD105-201ENST00000386910 85 ntBASIC0.92□□□□□ -2.26
TOP3BO95985 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.92□□□□□ -2.26
TOP3BO95985 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
TOP3BO95985 AC002350.1-201ENST00000490759 375 ntBASIC0.92□□□□□ -2.26
TOP3BO95985 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
TOP3BO95985 SNORD115-24-201ENST00000363528 82 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms