Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 RNU6-154P-201ENST00000384306 106 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 MIR224-201ENST00000384889 81 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 RNU6-182P-201ENST00000516970 105 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 AL162726.3-218ENST00000636401 95 ntBASIC-0.46□□□□□ -2.48
TRIM3O75382 MIR655-201ENST00000362159 97 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 SNORD114-29-201ENST00000364819 70 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 MT-TY-201ENST00000387409 66 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 RNU6-816P-201ENST00000390914 107 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 MIR1265-201ENST00000408444 86 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 MIR1912-201ENST00000410389 80 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.47□□□□□ -2.48
TRIM3O75382 RNU6-758P-201ENST00000516292 89 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 MTND5P41-201ENST00000517498 206 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 MIR3681-201ENST00000580089 72 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 MIR4788-201ENST00000639104 80 ntBASIC-0.47□□□□□ -2.48
TRIM3O75382 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.48□□□□□ -2.49
TRIM3O75382 RNY4P6-201ENST00000363667 96 ntBASIC-0.48□□□□□ -2.49
TRIM3O75382 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.48□□□□□ -2.49
TRIM3O75382 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
TRIM3O75382 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.48□□□□□ -2.49
TRIM3O75382 AC025166.1-201ENST00000612411 163 ntBASIC-0.48□□□□□ -2.49
TRIM3O75382 RNA5SP205-201ENST00000364653 136 ntBASIC-0.49□□□□□ -2.49
TRIM3O75382 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
TRIM3O75382 RNU6-175P-201ENST00000516896 107 ntBASIC-0.49□□□□□ -2.49
TRIM3O75382 AL442128.1-201ENST00000615151 90 ntBASIC-0.49□□□□□ -2.49
TRIM3O75382 MTND5P18-201ENST00000445624 1801 ntBASIC-0.5□□□□□ -2.49
TRIM3O75382 SNORD114-11-201ENST00000363738 75 ntBASIC-0.5□□□□□ -2.49
TRIM3O75382 RNU6-426P-201ENST00000516464 97 ntBASIC-0.5□□□□□ -2.49
TRIM3O75382 MIR4263-201ENST00000584745 83 ntBASIC-0.5□□□□□ -2.49
TRIM3O75382 AC108676.2-201ENST00000605225 163 ntBASIC-0.5□□□□□ -2.49
TRIM3O75382 SNORD58C-201ENST00000365223 64 ntBASIC-0.51□□□□□ -2.49
TRIM3O75382 MIR539-201ENST00000365690 78 ntBASIC-0.51□□□□□ -2.49
TRIM3O75382 RNU6-466P-201ENST00000391224 103 ntBASIC-0.51□□□□□ -2.49
TRIM3O75382 snoU13.11-201ENST00000459219 104 ntBASIC-0.51□□□□□ -2.49
TRIM3O75382 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.51□□□□□ -2.49
TRIM3O75382 AL590491.3-201ENST00000610731 82 ntBASIC-0.51□□□□□ -2.49
TRIM3O75382 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.51□□□□□ -2.49
TRIM3O75382 SNORD101-201ENST00000384027 73 ntBASIC-0.52□□□□□ -2.49
TRIM3O75382 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.52□□□□□ -2.49
TRIM3O75382 RNU6-30P-201ENST00000384561 107 ntBASIC-0.52□□□□□ -2.49
TRIM3O75382 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.52□□□□□ -2.49
TRIM3O75382 MIR4696-201ENST00000581431 70 ntBASIC-0.52□□□□□ -2.49
TRIM3O75382 RNU6-664P-201ENST00000362381 107 ntBASIC-0.53□□□□□ -2.49
TRIM3O75382 RNU6-886P-201ENST00000384319 105 ntBASIC-0.53□□□□□ -2.49
TRIM3O75382 RNU6-35P-201ENST00000384530 107 ntBASIC-0.53□□□□□ -2.49
TRIM3O75382 AC114755.3-201ENST00000481111 251 ntBASIC-0.53□□□□□ -2.49
TRIM3O75382 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.53□□□□□ -2.49
TRIM3O75382 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 RNU6-480P-201ENST00000384332 107 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 MIR652-201ENST00000385278 98 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 AC007012.1-201ENST00000567192 175 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 MIR4432-201ENST00000581823 84 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.54□□□□□ -2.5
TRIM3O75382 AC096720.1-201ENST00000604441 183 ntBASIC-0.54□□□□□ -2.5
TRIM3O75382 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.55□□□□□ -2.5
TRIM3O75382 Z95118.1-201ENST00000421372 247 ntBASIC-0.55□□□□□ -2.5
TRIM3O75382 MTND4LP9-201ENST00000427694 174 ntBASIC-0.55□□□□□ -2.5
TRIM3O75382 MIR4436A-201ENST00000585278 85 ntBASIC-0.55□□□□□ -2.5
TRIM3O75382 MIR20A-201ENST00000362279 71 ntBASIC-0.56□□□□□ -2.5
TRIM3O75382 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.56□□□□□ -2.5
TRIM3O75382 RNU6-455P-201ENST00000384681 107 ntBASIC-0.56□□□□□ -2.5
TRIM3O75382 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.56□□□□□ -2.5
TRIM3O75382 SCARNA17-201ENST00000516183 144 ntBASIC-0.57□□□□□ -2.5
TRIM3O75382 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.58□□□□□ -2.5
TRIM3O75382 MIR577-201ENST00000385196 96 ntBASIC-0.58□□□□□ -2.5
TRIM3O75382 MT-TQ-201ENST00000387372 72 ntBASIC-0.58□□□□□ -2.5
TRIM3O75382 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.58□□□□□ -2.5
TRIM3O75382 MIR548O2-201ENST00000616090 70 ntBASIC-0.58□□□□□ -2.5
TRIM3O75382 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 RNY4P3-201ENST00000365254 95 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 RNU6-935P-201ENST00000410371 100 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 RNU6-772P-201ENST00000516042 105 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 AP000676.1-201ENST00000533307 52 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 RNU6-86P-201ENST00000606534 107 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 AC025521.1-201ENST00000621624 286 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 AL035470.1-201ENST00000622571 220 ntBASIC-0.59□□□□□ -2.5
TRIM3O75382 SNORD114-14-201ENST00000362723 75 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 MIR216B-201ENST00000390186 82 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 AC244090.1-201ENST00000441884 93 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 RNA5SP395-201ENST00000516567 118 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 RNU6-762P-201ENST00000517107 102 ntBASIC-0.6□□□□□ -2.51
TRIM3O75382 SNORD95.1-201ENST00000364099 68 ntBASIC-0.61□□□□□ -2.51
TRIM3O75382 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.61□□□□□ -2.51
TRIM3O75382 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
TRIM3O75382 MIR451A-201ENST00000385059 72 ntBASIC-0.61□□□□□ -2.51
TRIM3O75382 SNORA40-201ENST00000388090 126 ntBASIC-0.61□□□□□ -2.51
TRIM3O75382 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
TRIM3O75382 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms