Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU7-161P-201ENST00000517289 62 ntBASIC0.52□□□□□ -2.33
PRKNO60260 AC244669.1-204ENST00000621564 178 ntBASIC0.52□□□□□ -2.33
PRKNO60260 TRDV1-202ENST00000621643 102 ntBASIC0.52□□□□□ -2.33
PRKNO60260 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.52□□□□□ -2.33
PRKNO60260 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
PRKNO60260 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
PRKNO60260 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
PRKNO60260 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
PRKNO60260 RNU7-85P-201ENST00000458851 63 ntBASIC0.51□□□□□ -2.33
PRKNO60260 RNA5SP170-201ENST00000517150 101 ntBASIC0.51□□□□□ -2.33
PRKNO60260 RNA5SP47-201ENST00000517230 109 ntBASIC0.51□□□□□ -2.33
PRKNO60260 AC092634.7-201ENST00000621022 103 ntBASIC0.51□□□□□ -2.33
PRKNO60260 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
PRKNO60260 RNA5SP517-201ENST00000364724 117 ntBASIC0.5□□□□□ -2.33
PRKNO60260 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
PRKNO60260 RNU7-104P-201ENST00000459398 79 ntBASIC0.5□□□□□ -2.33
PRKNO60260 SCARNA16.5-201ENST00000517114 183 ntBASIC0.5□□□□□ -2.33
PRKNO60260 U6.100-201ENST00000636230 99 ntBASIC0.5□□□□□ -2.33
PRKNO60260 AC010487.4-201ENST00000637027 61 ntBASIC0.5□□□□□ -2.33
PRKNO60260 RNU6-519P-201ENST00000410590 108 ntBASIC0.49□□□□□ -2.33
PRKNO60260 Y_RNA.609-201ENST00000410669 89 ntBASIC0.49□□□□□ -2.33
PRKNO60260 RNU6-75P-201ENST00000515944 104 ntBASIC0.49□□□□□ -2.33
PRKNO60260 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
PRKNO60260 MIR5582-201ENST00000579697 68 ntBASIC0.49□□□□□ -2.33
PRKNO60260 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
PRKNO60260 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
PRKNO60260 Y_RNA.115-201ENST00000363272 98 ntBASIC0.48□□□□□ -2.33
PRKNO60260 Y_RNA.369-201ENST00000365568 117 ntBASIC0.48□□□□□ -2.33
PRKNO60260 SNORA8.2-201ENST00000384372 139 ntBASIC0.48□□□□□ -2.33
PRKNO60260 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
PRKNO60260 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.48□□□□□ -2.33
PRKNO60260 SNORD4B-201ENST00000459083 72 ntBASIC0.48□□□□□ -2.33
PRKNO60260 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
PRKNO60260 RNA5SP268-201ENST00000516828 124 ntBASIC0.48□□□□□ -2.33
PRKNO60260 RNU6-844P-201ENST00000517175 102 ntBASIC0.48□□□□□ -2.33
PRKNO60260 AC026421.1-201ENST00000519101 163 ntBASIC0.48□□□□□ -2.33
PRKNO60260 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
PRKNO60260 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
PRKNO60260 MIR6828-201ENST00000636181 60 ntBASIC0.48□□□□□ -2.33
PRKNO60260 RNA5SP227-201ENST00000516184 113 ntBASIC0.47□□□□□ -2.33
PRKNO60260 RNU6-65P-201ENST00000516332 98 ntBASIC0.47□□□□□ -2.33
PRKNO60260 RNU7-13P-201ENST00000516413 62 ntBASIC0.47□□□□□ -2.33
PRKNO60260 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
PRKNO60260 MTRNR2L2-201ENST00000604882 87 ntBASIC0.47□□□□□ -2.33
PRKNO60260 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.47□□□□□ -2.33
PRKNO60260 MIR924-201ENST00000638017 53 ntBASIC0.47□□□□□ -2.33
PRKNO60260 Y_RNA.43-201ENST00000362670 111 ntBASIC0.46□□□□□ -2.34
PRKNO60260 RNA5SP457-201ENST00000363657 124 ntBASIC0.46□□□□□ -2.34
PRKNO60260 RNU6-726P-201ENST00000364680 107 ntBASIC0.46□□□□□ -2.34
PRKNO60260 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
PRKNO60260 MIR548L-201ENST00000408303 86 ntBASIC0.46□□□□□ -2.34
PRKNO60260 SNORA40.8-201ENST00000411034 126 ntBASIC0.46□□□□□ -2.34
PRKNO60260 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
PRKNO60260 RNA5SP330-201ENST00000517096 96 ntBASIC0.46□□□□□ -2.34
PRKNO60260 MIR4668-201ENST00000582284 70 ntBASIC0.46□□□□□ -2.34
PRKNO60260 MIR4536-1-201ENST00000583537 88 ntBASIC0.46□□□□□ -2.34
PRKNO60260 AC067863.3-201ENST00000624172 122 ntBASIC0.46□□□□□ -2.34
PRKNO60260 SNORD115-44-201ENST00000365391 82 ntBASIC0.45□□□□□ -2.34
PRKNO60260 SNORD101-201ENST00000384027 73 ntBASIC0.45□□□□□ -2.34
PRKNO60260 SNORD41.1-201ENST00000391000 69 ntBASIC0.45□□□□□ -2.34
PRKNO60260 Y_RNA.596-201ENST00000410462 109 ntBASIC0.45□□□□□ -2.34
PRKNO60260 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
PRKNO60260 MIR3920-201ENST00000581751 86 ntBASIC0.45□□□□□ -2.34
PRKNO60260 MIR7107-201ENST00000611489 80 ntBASIC0.45□□□□□ -2.34
PRKNO60260 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
PRKNO60260 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
PRKNO60260 MIRLET7F1-201ENST00000362202 87 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-1255P-201ENST00000363434 112 ntBASIC0.44□□□□□ -2.34
PRKNO60260 Y_RNA.258-201ENST00000364613 105 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-219P-201ENST00000364728 107 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-294P-201ENST00000364999 102 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-1134P-201ENST00000365156 101 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-132P-201ENST00000383863 107 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-1126P-201ENST00000384002 107 ntBASIC0.44□□□□□ -2.34
PRKNO60260 SNORD116-22-201ENST00000384430 92 ntBASIC0.44□□□□□ -2.34
PRKNO60260 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-402P-201ENST00000410678 103 ntBASIC0.44□□□□□ -2.34
PRKNO60260 Y_RNA.620-201ENST00000411009 88 ntBASIC0.44□□□□□ -2.34
PRKNO60260 MIR3064-201ENST00000581130 66 ntBASIC0.44□□□□□ -2.34
PRKNO60260 MIR548AG2-201ENST00000581228 64 ntBASIC0.44□□□□□ -2.34
PRKNO60260 MIR4696-201ENST00000581431 70 ntBASIC0.44□□□□□ -2.34
PRKNO60260 MIR8087-201ENST00000612745 78 ntBASIC0.44□□□□□ -2.34
PRKNO60260 RNU6-664P-201ENST00000362381 107 ntBASIC0.43□□□□□ -2.34
PRKNO60260 Y_RNA.17-201ENST00000362433 111 ntBASIC0.43□□□□□ -2.34
PRKNO60260 SNORD118-201ENST00000363593 134 ntBASIC0.43□□□□□ -2.34
PRKNO60260 RNU6-811P-201ENST00000384069 107 ntBASIC0.43□□□□□ -2.34
PRKNO60260 Y_RNA.593-201ENST00000410292 98 ntBASIC0.43□□□□□ -2.34
PRKNO60260 AC104996.3-201ENST00000590718 94 ntBASIC0.43□□□□□ -2.34
PRKNO60260 RNU4-32P-201ENST00000363404 141 ntBASIC0.42□□□□□ -2.34
PRKNO60260 Y_RNA.207-201ENST00000364142 106 ntBASIC0.42□□□□□ -2.34
PRKNO60260 SNORD115-27-201ENST00000364430 82 ntBASIC0.42□□□□□ -2.34
PRKNO60260 RNU6-675P-201ENST00000384236 104 ntBASIC0.42□□□□□ -2.34
PRKNO60260 Y_RNA.558-201ENST00000384685 113 ntBASIC0.42□□□□□ -2.34
PRKNO60260 MIR548U-201ENST00000390728 81 ntBASIC0.42□□□□□ -2.34
PRKNO60260 RNA5SP292-201ENST00000390974 118 ntBASIC0.42□□□□□ -2.34
PRKNO60260 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
PRKNO60260 MIR2113-201ENST00000459007 91 ntBASIC0.42□□□□□ -2.34
PRKNO60260 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
PRKNO60260 RNU6-287P-201ENST00000516230 98 ntBASIC0.42□□□□□ -2.34
PRKNO60260 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms