Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU7-6P-201ENST00000516845 62 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 MIR548AM-201ENST00000584298 74 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 AC119751.7-201ENST00000600494 245 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 AL132765.2-201ENST00000610812 351 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 AL138825.1-201ENST00000618587 192 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 AL512310.12-203ENST00000640543 90 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.86□□□□□ -2.87
HMGN4O00479 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.86□□□□□ -2.87
HMGN4O00479 MTATP6P21-201ENST00000440681 189 ntBASIC-2.86□□□□□ -2.87
HMGN4O00479 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.86□□□□□ -2.87
HMGN4O00479 AC109635.3-201ENST00000529536 185 ntBASIC-2.86□□□□□ -2.87
HMGN4O00479 MIR3123-201ENST00000583417 75 ntBASIC-2.86□□□□□ -2.87
HMGN4O00479 AC006254.2-201ENST00000603259 279 ntBASIC-2.86□□□□□ -2.87
HMGN4O00479 RNY4P28-201ENST00000365281 93 ntBASIC-2.87□□□□□ -2.87
HMGN4O00479 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.87□□□□□ -2.87
HMGN4O00479 RNU6-246P-201ENST00000384702 107 ntBASIC-2.87□□□□□ -2.87
HMGN4O00479 SNORD115-46-201ENST00000390982 71 ntBASIC-2.87□□□□□ -2.87
HMGN4O00479 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.87□□□□□ -2.87
HMGN4O00479 RNU6-976P-201ENST00000516086 111 ntBASIC-2.87□□□□□ -2.87
HMGN4O00479 RNU6-699P-201ENST00000517081 110 ntBASIC-2.87□□□□□ -2.87
HMGN4O00479 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.88□□□□□ -2.87
HMGN4O00479 SNORD81.2-201ENST00000365153 76 ntBASIC-2.88□□□□□ -2.87
HMGN4O00479 RNY4P20-201ENST00000516678 93 ntBASIC-2.88□□□□□ -2.87
HMGN4O00479 SNORA20.3-201ENST00000516880 132 ntBASIC-2.88□□□□□ -2.87
HMGN4O00479 MIR23C-201ENST00000579846 100 ntBASIC-2.88□□□□□ -2.87
HMGN4O00479 MIR5690-201ENST00000583739 73 ntBASIC-2.88□□□□□ -2.87
HMGN4O00479 AC092794.1-201ENST00000612734 582 ntBASIC-2.88□□□□□ -2.87
HMGN4O00479 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.89□□□□□ -2.87
HMGN4O00479 MIR521-2-201ENST00000384818 87 ntBASIC-2.89□□□□□ -2.87
HMGN4O00479 SNORA7.5-201ENST00000410672 110 ntBASIC-2.89□□□□□ -2.87
HMGN4O00479 RNU2-38P-201ENST00000410856 79 ntBASIC-2.89□□□□□ -2.87
HMGN4O00479 AL365265.1-201ENST00000621045 234 ntBASIC-2.89□□□□□ -2.87
HMGN4O00479 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 RNU6-103P-201ENST00000363686 107 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 RNU4-14P-201ENST00000410858 122 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 AL021921.1-201ENST00000442774 93 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 AL606534.2-204ENST00000635008 178 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 MIR1255B1-201ENST00000636325 63 ntBASIC-2.9□□□□□ -2.87
HMGN4O00479 RNU6-382P-201ENST00000365181 106 ntBASIC-2.91□□□□□ -2.88
HMGN4O00479 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.91□□□□□ -2.88
HMGN4O00479 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.91□□□□□ -2.88
HMGN4O00479 DEFB108C-201ENST00000400154 252 ntBASIC-2.91□□□□□ -2.88
HMGN4O00479 MIR3657-201ENST00000584818 117 ntBASIC-2.91□□□□□ -2.88
HMGN4O00479 MIR6509-201ENST00000614603 85 ntBASIC-2.91□□□□□ -2.88
HMGN4O00479 RNU6-132P-201ENST00000383863 107 ntBASIC-2.92□□□□□ -2.88
HMGN4O00479 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.92□□□□□ -2.88
HMGN4O00479 MIR203A-201ENST00000384836 110 ntBASIC-2.92□□□□□ -2.88
HMGN4O00479 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.92□□□□□ -2.88
HMGN4O00479 SNORD116.3-201ENST00000517176 78 ntBASIC-2.92□□□□□ -2.88
HMGN4O00479 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.93□□□□□ -2.88
HMGN4O00479 MIR548U-201ENST00000390728 81 ntBASIC-2.93□□□□□ -2.88
HMGN4O00479 AC025253.1-201ENST00000613623 543 ntBASIC-2.93□□□□□ -2.88
HMGN4O00479 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.94□□□□□ -2.88
HMGN4O00479 SNORD50.2-201ENST00000365465 70 ntBASIC-2.94□□□□□ -2.88
HMGN4O00479 RNU6-608P-201ENST00000383927 104 ntBASIC-2.94□□□□□ -2.88
HMGN4O00479 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.94□□□□□ -2.88
HMGN4O00479 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.94□□□□□ -2.88
HMGN4O00479 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.95□□□□□ -2.88
HMGN4O00479 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.95□□□□□ -2.88
HMGN4O00479 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.95□□□□□ -2.88
HMGN4O00479 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.95□□□□□ -2.88
HMGN4O00479 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.95□□□□□ -2.88
HMGN4O00479 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.95□□□□□ -2.88
HMGN4O00479 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.96□□□□□ -2.88
HMGN4O00479 RNU7-85P-201ENST00000458851 63 ntBASIC-2.96□□□□□ -2.88
HMGN4O00479 MIR548AG1-201ENST00000579932 66 ntBASIC-2.96□□□□□ -2.88
HMGN4O00479 MIR4744-201ENST00000581563 82 ntBASIC-2.96□□□□□ -2.88
HMGN4O00479 MIR3163-201ENST00000581592 73 ntBASIC-2.96□□□□□ -2.88
HMGN4O00479 AC104985.2-201ENST00000620598 500 ntBASIC-2.96□□□□□ -2.88
HMGN4O00479 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 RNY4P7-201ENST00000364600 96 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 RNU6-643P-201ENST00000384018 107 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.97□□□□□ -2.88
HMGN4O00479 MIR3064-201ENST00000581130 66 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 Z99129.1-201ENST00000612510 255 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 AC107308.1-201ENST00000615897 301 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 AC025521.1-201ENST00000621624 286 ntBASIC-2.97□□□□□ -2.88
HMGN4O00479 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.98□□□□□ -2.89
HMGN4O00479 SNORD116-6-201ENST00000384711 96 ntBASIC-2.98□□□□□ -2.89
HMGN4O00479 AC006362.1-201ENST00000567392 174 ntBASIC-2.98□□□□□ -2.89
HMGN4O00479 AL137067.1-201ENST00000615933 120 ntBASIC-2.98□□□□□ -2.89
HMGN4O00479 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.99□□□□□ -2.89
HMGN4O00479 RNU6-478P-201ENST00000363904 110 ntBASIC-2.99□□□□□ -2.89
HMGN4O00479 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.99□□□□□ -2.89
HMGN4O00479 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.99□□□□□ -2.89
HMGN4O00479 MIR466-201ENST00000580653 84 ntBASIC-2.99□□□□□ -2.89
HMGN4O00479 SNORD58B-201ENST00000607313 66 ntBASIC-2.99□□□□□ -2.89
HMGN4O00479 MIR4773-1-201ENST00000637203 78 ntBASIC-2.99□□□□□ -2.89
HMGN4O00479 SNORD2.1-201ENST00000458762 69 ntBASIC-3□□□□□ -2.89
HMGN4O00479 AC104996.3-201ENST00000590718 94 ntBASIC-3□□□□□ -2.89
HMGN4O00479 RNU6-363P-201ENST00000362895 105 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 Y_RNA.463-201ENST00000384271 102 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 MT-TI-201ENST00000387365 69 ntBASIC-3.01□□□□□ -2.89
HMGN4O00479 RNU6-578P-201ENST00000390980 103 ntBASIC-3.01□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms