Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC037487.3-201ENST00000606668 112 ntBASIC-3.01□□□□□ -2.89
CHKB-CPT1BH3BT56 AL138825.1-201ENST00000618587 192 ntBASIC-3.01□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.117-201ENST00000363294 101 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-1188P-201ENST00000363795 107 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.581-201ENST00000391017 97 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-510P-201ENST00000391239 108 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 AL121914.1-201ENST00000450188 156 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 SNORA40.14-201ENST00000516543 86 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU7-6P-201ENST00000516845 62 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 MIR23C-201ENST00000579846 100 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 MIR4723-201ENST00000585070 81 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 AL512310.12-203ENST00000640543 90 ntBASIC-3.02□□□□□ -2.89
CHKB-CPT1BH3BT56 SNORD81.2-201ENST00000365153 76 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.359-201ENST00000365498 102 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 MIR521-2-201ENST00000384818 87 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 SNORD115-46-201ENST00000390982 71 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-584P-201ENST00000410350 95 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU2-38P-201ENST00000410856 79 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 MTATP6P21-201ENST00000440681 189 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 AL021921.1-201ENST00000442774 93 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 RNU6-976P-201ENST00000516086 111 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 AC109635.3-201ENST00000529536 185 ntBASIC-3.03□□□□□ -2.89
CHKB-CPT1BH3BT56 Y_RNA.41-201ENST00000362646 102 ntBASIC-3.04□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-699P-201ENST00000517081 110 ntBASIC-3.04□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR3657-201ENST00000584818 117 ntBASIC-3.04□□□□□ -2.9
CHKB-CPT1BH3BT56 AL606534.2-204ENST00000635008 178 ntBASIC-3.04□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR1255B1-201ENST00000636325 63 ntBASIC-3.04□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-103P-201ENST00000363686 107 ntBASIC-3.05□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-382P-201ENST00000365181 106 ntBASIC-3.05□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-132P-201ENST00000383863 107 ntBASIC-3.05□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-608P-201ENST00000383927 104 ntBASIC-3.05□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU4-14P-201ENST00000410858 122 ntBASIC-3.05□□□□□ -2.9
CHKB-CPT1BH3BT56 SNORA7.5-201ENST00000410672 110 ntBASIC-3.06□□□□□ -2.9
CHKB-CPT1BH3BT56 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.06□□□□□ -2.9
CHKB-CPT1BH3BT56 SNORA20.3-201ENST00000516880 132 ntBASIC-3.06□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR548AG1-201ENST00000579932 66 ntBASIC-3.06□□□□□ -2.9
CHKB-CPT1BH3BT56 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.07□□□□□ -2.9
CHKB-CPT1BH3BT56 Y_RNA.445-201ENST00000384168 102 ntBASIC-3.07□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.07□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR203A-201ENST00000384836 110 ntBASIC-3.07□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR5690-201ENST00000583739 73 ntBASIC-3.07□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR6509-201ENST00000614603 85 ntBASIC-3.07□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-1042P-201ENST00000384204 107 ntBASIC-3.08□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR548U-201ENST00000390728 81 ntBASIC-3.08□□□□□ -2.9
CHKB-CPT1BH3BT56 DEFB108C-201ENST00000400154 252 ntBASIC-3.08□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU7-85P-201ENST00000458851 63 ntBASIC-3.08□□□□□ -2.9
CHKB-CPT1BH3BT56 MIR466-201ENST00000580653 84 ntBASIC-3.08□□□□□ -2.9
CHKB-CPT1BH3BT56 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-3.08□□□□□ -2.9
CHKB-CPT1BH3BT56 SNORD50.2-201ENST00000365465 70 ntBASIC-3.09□□□□□ -2.9
CHKB-CPT1BH3BT56 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.09□□□□□ -2.9
CHKB-CPT1BH3BT56 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.09□□□□□ -2.9
CHKB-CPT1BH3BT56 AC025253.1-201ENST00000613623 543 ntBASIC-3.09□□□□□ -2.9
CHKB-CPT1BH3BT56 AC104985.2-201ENST00000620598 500 ntBASIC-3.09□□□□□ -2.9
CHKB-CPT1BH3BT56 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.1□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.402-201ENST00000383972 102 ntBASIC-3.1□□□□□ -2.91
CHKB-CPT1BH3BT56 MIR4748-201ENST00000578076 82 ntBASIC-3.1□□□□□ -2.91
CHKB-CPT1BH3BT56 MIR3064-201ENST00000581130 66 ntBASIC-3.1□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-478P-201ENST00000363904 110 ntBASIC-3.11□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-1018P-201ENST00000516577 106 ntBASIC-3.11□□□□□ -2.91
CHKB-CPT1BH3BT56 SNORD116.3-201ENST00000517176 78 ntBASIC-3.11□□□□□ -2.91
CHKB-CPT1BH3BT56 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.11□□□□□ -2.91
CHKB-CPT1BH3BT56 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.11□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.39-201ENST00000362620 98 ntBASIC-3.12□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.651-201ENST00000459380 103 ntBASIC-3.12□□□□□ -2.91
CHKB-CPT1BH3BT56 MIR3163-201ENST00000581592 73 ntBASIC-3.12□□□□□ -2.91
CHKB-CPT1BH3BT56 AC025521.1-201ENST00000621624 286 ntBASIC-3.12□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.31-201ENST00000362574 102 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.275-201ENST00000364726 110 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-643P-201ENST00000384018 107 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-1119P-201ENST00000384349 108 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 MIR4744-201ENST00000581563 82 ntBASIC-3.13□□□□□ -2.91
CHKB-CPT1BH3BT56 Y_RNA.183-201ENST00000363882 113 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 MT-TI-201ENST00000387365 69 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-258P-201ENST00000390884 101 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 SNORD2.1-201ENST00000458762 69 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 AC120024.2-201ENST00000576526 175 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 AC104996.3-201ENST00000590718 94 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 SNORD58B-201ENST00000607313 66 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 Z99129.1-201ENST00000612510 255 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 AC107308.1-201ENST00000615897 301 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 MIR6739-201ENST00000622461 75 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 U6.106-201ENST00000636360 105 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 MIR4773-1-201ENST00000637203 78 ntBASIC-3.14□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.15□□□□□ -2.91
CHKB-CPT1BH3BT56 SNORD116-6-201ENST00000384711 96 ntBASIC-3.15□□□□□ -2.91
CHKB-CPT1BH3BT56 RNU6-630P-201ENST00000391258 106 ntBASIC-3.15□□□□□ -2.91
CHKB-CPT1BH3BT56 AL137067.1-201ENST00000615933 120 ntBASIC-3.15□□□□□ -2.91
CHKB-CPT1BH3BT56 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.16□□□□□ -2.92
CHKB-CPT1BH3BT56 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.16□□□□□ -2.92
CHKB-CPT1BH3BT56 RNA5SP93-201ENST00000362525 114 ntBASIC-3.17□□□□□ -2.92
CHKB-CPT1BH3BT56 RNU6-363P-201ENST00000362895 105 ntBASIC-3.17□□□□□ -2.92
CHKB-CPT1BH3BT56 Y_RNA.80-201ENST00000362996 102 ntBASIC-3.17□□□□□ -2.92
CHKB-CPT1BH3BT56 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.17□□□□□ -2.92
CHKB-CPT1BH3BT56 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.17□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 277.8 ms