Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.59□□□□□ -2.15
USP17L3A6NCW0 RNU7-13P-201ENST00000516413 62 ntBASIC1.59□□□□□ -2.15
USP17L3A6NCW0 RNU6-1057P-201ENST00000517162 102 ntBASIC1.59□□□□□ -2.15
USP17L3A6NCW0 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.59□□□□□ -2.15
USP17L3A6NCW0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USP17L3A6NCW0 MIRLET7A1-201ENST00000362295 80 ntBASIC1.58□□□□□ -2.16
USP17L3A6NCW0 RNU6-208P-201ENST00000362431 107 ntBASIC1.58□□□□□ -2.16
USP17L3A6NCW0 SNORD114-24-201ENST00000365029 72 ntBASIC1.58□□□□□ -2.16
USP17L3A6NCW0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
USP17L3A6NCW0 AC025627.3-201ENST00000582078 182 ntBASIC1.58□□□□□ -2.16
USP17L3A6NCW0 MIR26B-201ENST00000362251 77 ntBASIC1.57□□□□□ -2.16
USP17L3A6NCW0 RNA5SP403-201ENST00000363598 108 ntBASIC1.57□□□□□ -2.16
USP17L3A6NCW0 RNU1-124P-201ENST00000363861 145 ntBASIC1.57□□□□□ -2.16
USP17L3A6NCW0 RNU6-1296P-201ENST00000383879 107 ntBASIC1.57□□□□□ -2.16
USP17L3A6NCW0 RNU6-42P-201ENST00000384165 107 ntBASIC1.57□□□□□ -2.16
USP17L3A6NCW0 AL078603.1-201ENST00000603824 313 ntBASIC1.57□□□□□ -2.16
USP17L3A6NCW0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.57□□□□□ -2.16
USP17L3A6NCW0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
USP17L3A6NCW0 Y_RNA.207-201ENST00000364142 106 ntBASIC1.56□□□□□ -2.16
USP17L3A6NCW0 RNA5SP404-201ENST00000517118 132 ntBASIC1.56□□□□□ -2.16
USP17L3A6NCW0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.56□□□□□ -2.16
USP17L3A6NCW0 MIR451A-201ENST00000385059 72 ntBASIC1.55□□□□□ -2.16
USP17L3A6NCW0 RNU7-104P-201ENST00000459398 79 ntBASIC1.55□□□□□ -2.16
USP17L3A6NCW0 RNA5SP220-201ENST00000516298 104 ntBASIC1.55□□□□□ -2.16
USP17L3A6NCW0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
USP17L3A6NCW0 RNU1-93P-201ENST00000364704 169 ntBASIC1.54□□□□□ -2.16
USP17L3A6NCW0 MIR573-201ENST00000384964 99 ntBASIC1.54□□□□□ -2.16
USP17L3A6NCW0 SNORD90-201ENST00000391145 111 ntBASIC1.54□□□□□ -2.16
USP17L3A6NCW0 RNU7-161P-201ENST00000517289 62 ntBASIC1.54□□□□□ -2.16
USP17L3A6NCW0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
USP17L3A6NCW0 RNU6-1229P-201ENST00000364295 107 ntBASIC1.53□□□□□ -2.16
USP17L3A6NCW0 RNU6-287P-201ENST00000516230 98 ntBASIC1.53□□□□□ -2.16
USP17L3A6NCW0 MIR4639-201ENST00000584938 69 ntBASIC1.53□□□□□ -2.16
USP17L3A6NCW0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.53□□□□□ -2.16
USP17L3A6NCW0 RNU6-776P-201ENST00000364403 104 ntBASIC1.52□□□□□ -2.17
USP17L3A6NCW0 RNU6-1022P-201ENST00000365049 104 ntBASIC1.52□□□□□ -2.17
USP17L3A6NCW0 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
USP17L3A6NCW0 MIR644A-201ENST00000385262 94 ntBASIC1.52□□□□□ -2.17
USP17L3A6NCW0 MIR618-201ENST00000385287 98 ntBASIC1.52□□□□□ -2.17
USP17L3A6NCW0 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
USP17L3A6NCW0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USP17L3A6NCW0 RNA5SP255-201ENST00000516370 107 ntBASIC1.51□□□□□ -2.17
USP17L3A6NCW0 AC145423.2-201ENST00000610631 239 ntBASIC1.51□□□□□ -2.17
USP17L3A6NCW0 MIR6734-201ENST00000621166 68 ntBASIC1.51□□□□□ -2.17
USP17L3A6NCW0 AC067863.3-201ENST00000624172 122 ntBASIC1.51□□□□□ -2.17
USP17L3A6NCW0 MIR2113-201ENST00000459007 91 ntBASIC1.5□□□□□ -2.17
USP17L3A6NCW0 RNU6-807P-201ENST00000516805 107 ntBASIC1.5□□□□□ -2.17
USP17L3A6NCW0 U7.4-201ENST00000614961 63 ntBASIC1.5□□□□□ -2.17
USP17L3A6NCW0 SNORD114-27-201ENST00000363766 70 ntBASIC1.49□□□□□ -2.17
USP17L3A6NCW0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.49□□□□□ -2.17
USP17L3A6NCW0 RNU6-1126P-201ENST00000384002 107 ntBASIC1.49□□□□□ -2.17
USP17L3A6NCW0 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
USP17L3A6NCW0 U3.27-201ENST00000391237 200 ntBASIC1.49□□□□□ -2.17
USP17L3A6NCW0 MIR3612-201ENST00000579753 87 ntBASIC1.49□□□□□ -2.17
USP17L3A6NCW0 MIR1297-201ENST00000637311 77 ntBASIC1.49□□□□□ -2.17
USP17L3A6NCW0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
USP17L3A6NCW0 MIR3920-201ENST00000581751 86 ntBASIC1.48□□□□□ -2.17
USP17L3A6NCW0 MIR3140-201ENST00000583685 90 ntBASIC1.48□□□□□ -2.17
USP17L3A6NCW0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
USP17L3A6NCW0 SNORD28-201ENST00000384706 75 ntBASIC1.47□□□□□ -2.17
USP17L3A6NCW0 MIR520E-201ENST00000384867 87 ntBASIC1.47□□□□□ -2.17
USP17L3A6NCW0 MIR216B-201ENST00000390186 82 ntBASIC1.47□□□□□ -2.17
USP17L3A6NCW0 RNU6-303P-201ENST00000517091 106 ntBASIC1.47□□□□□ -2.17
USP17L3A6NCW0 AC244669.1-204ENST00000621564 178 ntBASIC1.47□□□□□ -2.17
USP17L3A6NCW0 Y_RNA.12-201ENST00000362393 112 ntBASIC1.46□□□□□ -2.18
USP17L3A6NCW0 snoU13.17-201ENST00000458802 104 ntBASIC1.46□□□□□ -2.18
USP17L3A6NCW0 RNU7-74P-201ENST00000459104 62 ntBASIC1.46□□□□□ -2.18
USP17L3A6NCW0 YWHAEP2-201ENST00000580066 112 ntBASIC1.46□□□□□ -2.18
USP17L3A6NCW0 YWHAEP3-201ENST00000582767 121 ntBASIC1.46□□□□□ -2.18
USP17L3A6NCW0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.45□□□□□ -2.18
USP17L3A6NCW0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
USP17L3A6NCW0 SNORD18A-201ENST00000363753 72 ntBASIC1.45□□□□□ -2.18
USP17L3A6NCW0 MIR548L-201ENST00000408303 86 ntBASIC1.45□□□□□ -2.18
USP17L3A6NCW0 Y_RNA.540-201ENST00000384638 111 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 MIR617-201ENST00000385030 97 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
USP17L3A6NCW0 MIR889-201ENST00000401280 79 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 RNU6-719P-201ENST00000516671 104 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.44□□□□□ -2.18
USP17L3A6NCW0 MIR3678-201ENST00000578455 94 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 AC022709.1-201ENST00000615967 87 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 MIR6767-201ENST00000637302 66 ntBASIC1.44□□□□□ -2.18
USP17L3A6NCW0 RNU4-45P-201ENST00000365469 141 ntBASIC1.43□□□□□ -2.18
USP17L3A6NCW0 SNORD99-201ENST00000408612 74 ntBASIC1.43□□□□□ -2.18
USP17L3A6NCW0 RPS29P1-201ENST00000465274 159 ntBASIC1.43□□□□□ -2.18
USP17L3A6NCW0 AC097510.1-201ENST00000510945 133 ntBASIC1.43□□□□□ -2.18
USP17L3A6NCW0 MIR548AG2-201ENST00000581228 64 ntBASIC1.43□□□□□ -2.18
USP17L3A6NCW0 RNU6-681P-201ENST00000364012 104 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 SNORA24B-201ENST00000384176 131 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 RNU2-59P-201ENST00000410482 191 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 RNA5SP47-201ENST00000517230 109 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 AC011195.1-201ENST00000578177 177 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 MIR4295-201ENST00000585286 85 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
USP17L3A6NCW0 AC087343.1-201ENST00000477341 475 ntBASIC1.41□□□□□ -2.18
USP17L3A6NCW0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.41□□□□□ -2.18
USP17L3A6NCW0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.41□□□□□ -2.18
USP17L3A6NCW0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 570.8 ms