Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 AL136317.1-201ENST00000612653 226 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 RMST_2.1-201ENST00000617263 136 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-509P-201ENST00000363519 107 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-1152P-201ENST00000384576 107 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 SNORD89-201ENST00000390981 114 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-466P-201ENST00000391224 103 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 SNORD4B-201ENST00000459083 72 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 AC138907.6-201ENST00000568401 126 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 AC138869.1-201ENST00000568623 124 ntBASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-497P-201ENST00000365316 104 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-573P-201ENST00000383938 106 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 MIR489-201ENST00000384923 84 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 MIR519A1-201ENST00000385257 85 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 Y_RNA.611-201ENST00000410682 108 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-592P-201ENST00000411333 103 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 RNU7-85P-201ENST00000458851 63 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-65P-201ENST00000516332 98 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 MIR4536-1-201ENST00000583537 88 ntBASIC1.18□□□□□ -2.22
CTDP1Q9Y5B0 MIR200A-201ENST00000384875 90 ntBASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 MIR520H-201ENST00000385126 88 ntBASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 MIR942-201ENST00000401111 86 ntBASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 AC097635.1-201ENST00000450678 155 ntBASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 MIR5588-201ENST00000581890 63 ntBASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.17□□□□□ -2.22
CTDP1Q9Y5B0 RNU4-32P-201ENST00000363404 141 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 SNORD115-27-201ENST00000364430 82 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 Y_RNA.283-201ENST00000364798 112 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 MIR519C-201ENST00000385053 87 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 U7.7-201ENST00000459276 60 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 MIR548BB-201ENST00000626714 66 ntBASIC1.16□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.15□□□□□ -2.23
CTDP1Q9Y5B0 RNU6-957P-201ENST00000363652 99 ntBASIC1.15□□□□□ -2.23
CTDP1Q9Y5B0 RNA5SP245-201ENST00000364239 121 ntBASIC1.15□□□□□ -2.23
CTDP1Q9Y5B0 MIR599-201ENST00000385069 95 ntBASIC1.15□□□□□ -2.23
CTDP1Q9Y5B0 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 SNORD114-24-201ENST00000365029 72 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 RNU6-1276P-201ENST00000365372 104 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 RNU6-979P-201ENST00000383896 107 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 Y_RNA.426-201ENST00000384068 113 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 MIR1236-201ENST00000408340 102 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CTDP1Q9Y5B0 SNORD115-37-201ENST00000363768 82 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 RNU6-524P-201ENST00000384270 107 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 RPL39P28-201ENST00000465655 155 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 MIR151B-201ENST00000584249 96 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 MIR6788-201ENST00000618842 66 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 MIR1245B-201ENST00000636115 69 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 MIR6767-201ENST00000637302 66 ntBASIC1.13□□□□□ -2.23
CTDP1Q9Y5B0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.12□□□□□ -2.23
CTDP1Q9Y5B0 SNORA31.14-201ENST00000516728 116 ntBASIC1.12□□□□□ -2.23
CTDP1Q9Y5B0 AC211469.2-201ENST00000605461 205 ntBASIC1.12□□□□□ -2.23
CTDP1Q9Y5B0 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
CTDP1Q9Y5B0 TRDV1-202ENST00000621643 102 ntBASIC1.12□□□□□ -2.23
CTDP1Q9Y5B0 Y_RNA.219-201ENST00000364232 113 ntBASIC1.11□□□□□ -2.23
CTDP1Q9Y5B0 RNA5SP117-201ENST00000365294 118 ntBASIC1.11□□□□□ -2.23
CTDP1Q9Y5B0 RNU6-811P-201ENST00000384069 107 ntBASIC1.11□□□□□ -2.23
CTDP1Q9Y5B0 AC093729.1-201ENST00000513074 128 ntBASIC1.11□□□□□ -2.23
CTDP1Q9Y5B0 RNU6-75P-201ENST00000515944 104 ntBASIC1.11□□□□□ -2.23
CTDP1Q9Y5B0 uc_338.16-201ENST00000621804 95 ntBASIC1.11□□□□□ -2.23
CTDP1Q9Y5B0 AC006160.2-201ENST00000637708 154 ntBASIC1.11□□□□□ -2.23
CTDP1Q9Y5B0 Y_RNA.221-201ENST00000364248 96 ntBASIC1.1□□□□□ -2.23
CTDP1Q9Y5B0 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
CTDP1Q9Y5B0 AL606490.4-201ENST00000423117 127 ntBASIC1.1□□□□□ -2.23
CTDP1Q9Y5B0 AC244505.6-201ENST00000452829 130 ntBASIC1.1□□□□□ -2.23
CTDP1Q9Y5B0 RNU7-171P-201ENST00000459581 62 ntBASIC1.1□□□□□ -2.23
CTDP1Q9Y5B0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.1□□□□□ -2.23
CTDP1Q9Y5B0 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 MIR548U-201ENST00000390728 81 ntBASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 AC002350.1-201ENST00000490759 375 ntBASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 RNU7-153P-201ENST00000516455 62 ntBASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 AC025627.3-201ENST00000582078 182 ntBASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 MIR3202-2-201ENST00000635980 79 ntBASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
CTDP1Q9Y5B0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CTDP1Q9Y5B0 Y_RNA.607-201ENST00000410597 98 ntBASIC1.08□□□□□ -2.24
CTDP1Q9Y5B0 MIR3064-201ENST00000581130 66 ntBASIC1.08□□□□□ -2.24
CTDP1Q9Y5B0 AC104996.3-201ENST00000590718 94 ntBASIC1.08□□□□□ -2.24
CTDP1Q9Y5B0 MIRLET7F1-201ENST00000362202 87 ntBASIC1.07□□□□□ -2.24
CTDP1Q9Y5B0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
CTDP1Q9Y5B0 RNU6-132P-201ENST00000383863 107 ntBASIC1.07□□□□□ -2.24
CTDP1Q9Y5B0 Y_RNA.437-201ENST00000384113 113 ntBASIC1.07□□□□□ -2.24
CTDP1Q9Y5B0 MIR4653-201ENST00000585107 83 ntBASIC1.07□□□□□ -2.24
CTDP1Q9Y5B0 SNORD115-24-201ENST00000363528 82 ntBASIC1.06□□□□□ -2.24
CTDP1Q9Y5B0 RNU6-1124P-201ENST00000384169 107 ntBASIC1.06□□□□□ -2.24
CTDP1Q9Y5B0 SNORD78.1-201ENST00000390866 65 ntBASIC1.06□□□□□ -2.24
CTDP1Q9Y5B0 RNA5SP292-201ENST00000390974 118 ntBASIC1.06□□□□□ -2.24
CTDP1Q9Y5B0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms