Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 RNA5SP255-201ENST00000516370 107 ntBASIC1.22□□□□□ -2.21
SF3B6Q9Y3B4 SNORA18.5-201ENST00000516616 101 ntBASIC1.22□□□□□ -2.21
SF3B6Q9Y3B4 MIR4666B-201ENST00000578142 81 ntBASIC1.22□□□□□ -2.21
SF3B6Q9Y3B4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.22□□□□□ -2.21
SF3B6Q9Y3B4 MIR3202-2-201ENST00000635980 79 ntBASIC1.22□□□□□ -2.21
SF3B6Q9Y3B4 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 SNORD115-24-201ENST00000363528 82 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 Y_RNA.313-201ENST00000365095 103 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 MIR518E-201ENST00000385252 88 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 MIR548U-201ENST00000390728 81 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 SNORA25.13-201ENST00000516395 103 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 MIR4796-201ENST00000580742 81 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 MIR4303-201ENST00000581299 66 ntBASIC1.21□□□□□ -2.22
SF3B6Q9Y3B4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 RNU6-652P-201ENST00000365488 107 ntBASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 MIR573-201ENST00000384964 99 ntBASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 SNORA17.3-201ENST00000391159 129 ntBASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 MIR1255A-201ENST00000408338 113 ntBASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 AC140658.3-201ENST00000567603 271 ntBASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
SF3B6Q9Y3B4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SF3B6Q9Y3B4 SNORD101-201ENST00000384027 73 ntBASIC1.19□□□□□ -2.22
SF3B6Q9Y3B4 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
SF3B6Q9Y3B4 MIR3612-201ENST00000579753 87 ntBASIC1.19□□□□□ -2.22
SF3B6Q9Y3B4 AC025627.3-201ENST00000582078 182 ntBASIC1.19□□□□□ -2.22
SF3B6Q9Y3B4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.19□□□□□ -2.22
SF3B6Q9Y3B4 RNU6-664P-201ENST00000362381 107 ntBASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 SNORD99-201ENST00000408612 74 ntBASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 RNA5SP225-201ENST00000410874 135 ntBASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 RNU7-161P-201ENST00000517289 62 ntBASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 MIR4696-201ENST00000581431 70 ntBASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.18□□□□□ -2.22
SF3B6Q9Y3B4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.17□□□□□ -2.22
SF3B6Q9Y3B4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SF3B6Q9Y3B4 RNA5SP403-201ENST00000363598 108 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 SNORD90-201ENST00000391145 111 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 AP1B1P2-201ENST00000416196 106 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 RNU7-104P-201ENST00000459398 79 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 RNU6-469P-201ENST00000516253 101 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 AC011195.1-201ENST00000578177 177 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.16□□□□□ -2.22
SF3B6Q9Y3B4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SF3B6Q9Y3B4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
SF3B6Q9Y3B4 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
SF3B6Q9Y3B4 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
SF3B6Q9Y3B4 RNU7-13P-201ENST00000516413 62 ntBASIC1.14□□□□□ -2.23
SF3B6Q9Y3B4 Y_RNA.685-201ENST00000516532 108 ntBASIC1.14□□□□□ -2.23
SF3B6Q9Y3B4 MIR3678-201ENST00000578455 94 ntBASIC1.14□□□□□ -2.23
SF3B6Q9Y3B4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
SF3B6Q9Y3B4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 AC244098.3-201ENST00000424803 96 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 AL603825.1-201ENST00000438481 80 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 AL450471.1-201ENST00000447509 127 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 snoU13.31-201ENST00000607291 104 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 AC244669.1-204ENST00000621564 178 ntBASIC1.13□□□□□ -2.23
SF3B6Q9Y3B4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.12□□□□□ -2.23
SF3B6Q9Y3B4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.12□□□□□ -2.23
SF3B6Q9Y3B4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SF3B6Q9Y3B4 RNU1-123P-201ENST00000458950 160 ntBASIC1.12□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-287P-201ENST00000516230 98 ntBASIC1.12□□□□□ -2.23
SF3B6Q9Y3B4 SNORD18A-201ENST00000363753 72 ntBASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 SNORD28-201ENST00000384706 75 ntBASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-135P-201ENST00000516769 101 ntBASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 MIR4498-201ENST00000577599 66 ntBASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 MIR4639-201ENST00000584938 69 ntBASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.11□□□□□ -2.23
SF3B6Q9Y3B4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-624P-201ENST00000363411 107 ntBASIC1.1□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-1229P-201ENST00000364295 107 ntBASIC1.1□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-935P-201ENST00000410371 100 ntBASIC1.1□□□□□ -2.23
SF3B6Q9Y3B4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.1□□□□□ -2.23
SF3B6Q9Y3B4 AC004223.1-201ENST00000479840 271 ntBASIC1.1□□□□□ -2.23
SF3B6Q9Y3B4 MIR3920-201ENST00000581751 86 ntBASIC1.1□□□□□ -2.23
SF3B6Q9Y3B4 MIR18A-201ENST00000362310 71 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 SNORA63.2-201ENST00000362603 126 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-478P-201ENST00000363904 110 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-129P-201ENST00000391022 107 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 MIR3140-201ENST00000583685 90 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 AC067863.3-201ENST00000624172 122 ntBASIC1.09□□□□□ -2.23
SF3B6Q9Y3B4 RNU6-161P-201ENST00000363051 106 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 742.9 ms