Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 Y_RNA.35-201ENST00000362601 101 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 Y_RNA.247-201ENST00000364500 92 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 SNORA2A-201ENST00000383885 135 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 MIR760-201ENST00000390220 80 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 RNA5SP299-201ENST00000391203 116 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 AL353813.1-201ENST00000440700 253 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 RPL39P34-201ENST00000477141 156 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 RNU6-1006P-201ENST00000516998 103 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
HCN3Q9P1Z3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.21□□□□□ -2.38
HCN3Q9P1Z3 Y_RNA.309-201ENST00000365046 111 ntBASIC0.21□□□□□ -2.38
HCN3Q9P1Z3 MIR548A3-201ENST00000385297 97 ntBASIC0.21□□□□□ -2.38
HCN3Q9P1Z3 MIR548M-201ENST00000408260 86 ntBASIC0.21□□□□□ -2.38
HCN3Q9P1Z3 SNORD33.1-201ENST00000516213 88 ntBASIC0.21□□□□□ -2.38
HCN3Q9P1Z3 RNU7-13P-201ENST00000516413 62 ntBASIC0.21□□□□□ -2.38
HCN3Q9P1Z3 AL035470.1-201ENST00000622571 220 ntBASIC0.21□□□□□ -2.38
HCN3Q9P1Z3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 RNU6-659P-201ENST00000516454 104 ntBASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 Y_RNA.712-201ENST00000517011 92 ntBASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 MIR4636-201ENST00000582271 80 ntBASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 AL442128.1-201ENST00000615151 90 ntBASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 U6.95-201ENST00000636931 70 ntBASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.2□□□□□ -2.38
HCN3Q9P1Z3 RNU6-1201P-201ENST00000384227 107 ntBASIC0.19□□□□□ -2.38
HCN3Q9P1Z3 Y_RNA.549-201ENST00000384657 102 ntBASIC0.19□□□□□ -2.38
HCN3Q9P1Z3 RNU6-243P-201ENST00000391140 107 ntBASIC0.19□□□□□ -2.38
HCN3Q9P1Z3 AL162376.1-201ENST00000624117 175 ntBASIC0.19□□□□□ -2.38
HCN3Q9P1Z3 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
HCN3Q9P1Z3 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
HCN3Q9P1Z3 Y_RNA.323-201ENST00000365157 109 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 SNORD41.1-201ENST00000391000 69 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 RNU6-269P-201ENST00000391077 97 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 MIR4679-2-201ENST00000578358 77 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 AC096720.1-201ENST00000604441 183 ntBASIC0.18□□□□□ -2.38
HCN3Q9P1Z3 SNORD116-14-201ENST00000383894 92 ntBASIC0.17□□□□□ -2.38
HCN3Q9P1Z3 SNORD116-17-201ENST00000383929 92 ntBASIC0.17□□□□□ -2.38
HCN3Q9P1Z3 SNORD116-15-201ENST00000384445 92 ntBASIC0.17□□□□□ -2.38
HCN3Q9P1Z3 SNORD116-19-201ENST00000384729 92 ntBASIC0.17□□□□□ -2.38
HCN3Q9P1Z3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.17□□□□□ -2.38
HCN3Q9P1Z3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.17□□□□□ -2.38
HCN3Q9P1Z3 RNA5SP128-201ENST00000365305 116 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 RNU6-848P-201ENST00000515948 107 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 RNU6-617P-201ENST00000516147 107 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 RNU6-1333P-201ENST00000516162 93 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 RNU6-473P-201ENST00000516164 107 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 AC068339.1-201ENST00000526965 141 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 MIR5589-201ENST00000579442 60 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 MIR499B-201ENST00000636498 73 ntBASIC0.16□□□□□ -2.38
HCN3Q9P1Z3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.15□□□□□ -2.39
HCN3Q9P1Z3 MIR3920-201ENST00000581751 86 ntBASIC0.15□□□□□ -2.39
HCN3Q9P1Z3 RNU1-29P-201ENST00000606574 126 ntBASIC0.15□□□□□ -2.39
HCN3Q9P1Z3 SNORA70.25-201ENST00000612741 95 ntBASIC0.15□□□□□ -2.39
HCN3Q9P1Z3 AL627230.5-201ENST00000619807 58 ntBASIC0.15□□□□□ -2.39
HCN3Q9P1Z3 AC073869.9-201ENST00000641610 120 ntBASIC0.15□□□□□ -2.39
HCN3Q9P1Z3 Y_RNA.173-201ENST00000363776 113 ntBASIC0.14□□□□□ -2.39
HCN3Q9P1Z3 MIR577-201ENST00000385196 96 ntBASIC0.14□□□□□ -2.39
HCN3Q9P1Z3 AL670379.3-201ENST00000605040 251 ntBASIC0.14□□□□□ -2.39
HCN3Q9P1Z3 RNU6-509P-201ENST00000363519 107 ntBASIC0.13□□□□□ -2.39
HCN3Q9P1Z3 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
HCN3Q9P1Z3 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
HCN3Q9P1Z3 RNU7-74P-201ENST00000459104 62 ntBASIC0.13□□□□□ -2.39
HCN3Q9P1Z3 Y_RNA.659-201ENST00000515994 113 ntBASIC0.13□□□□□ -2.39
HCN3Q9P1Z3 MIR4694-201ENST00000578534 80 ntBASIC0.13□□□□□ -2.39
HCN3Q9P1Z3 MIR4802-201ENST00000581881 80 ntBASIC0.13□□□□□ -2.39
HCN3Q9P1Z3 SNORD36A-201ENST00000362874 73 ntBASIC0.12□□□□□ -2.39
HCN3Q9P1Z3 RNU6-959P-201ENST00000384671 107 ntBASIC0.12□□□□□ -2.39
HCN3Q9P1Z3 RNU6-127P-201ENST00000390897 107 ntBASIC0.12□□□□□ -2.39
HCN3Q9P1Z3 AC006210.1-201ENST00000424882 111 ntBASIC0.12□□□□□ -2.39
HCN3Q9P1Z3 MIR5706-201ENST00000579841 80 ntBASIC0.12□□□□□ -2.39
HCN3Q9P1Z3 RNA5SP214-201ENST00000363378 118 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 U8.6-201ENST00000364939 135 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 Y_RNA.377-201ENST00000365644 108 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 AL161932.1-201ENST00000437408 146 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 TMSB4XP3-201ENST00000445144 114 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 NAMPTP3-201ENST00000569273 224 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 U7.6-201ENST00000610841 64 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 TRDV1-202ENST00000621643 102 ntBASIC0.11□□□□□ -2.39
HCN3Q9P1Z3 RNU6-832P-201ENST00000363319 107 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 RNU6-1125P-201ENST00000363601 107 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 RNU6-1163P-201ENST00000364516 107 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 Y_RNA.261-201ENST00000364631 102 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 RNU6-480P-201ENST00000384332 107 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 SNORD110-201ENST00000408189 75 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 RNA5SP484-201ENST00000458857 111 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 MIR5009-201ENST00000578736 100 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
HCN3Q9P1Z3 RNY3P2-201ENST00000362918 102 ntBASIC0.09□□□□□ -2.4
HCN3Q9P1Z3 SNORD115-44-201ENST00000365391 82 ntBASIC0.09□□□□□ -2.4
HCN3Q9P1Z3 Y_RNA.353-201ENST00000365440 108 ntBASIC0.09□□□□□ -2.4
HCN3Q9P1Z3 SNORD116-21-201ENST00000384507 92 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms