Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 RNU6-480P-201ENST00000384332 107 ntBASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.96-201ENST00000363092 109 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.544-201ENST00000384650 113 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR516A2-201ENST00000384888 90 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR516A1-201ENST00000385033 90 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR644A-201ENST00000385262 94 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 RNU6-644P-201ENST00000391155 98 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 RNU7-61P-201ENST00000515897 61 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR4639-201ENST00000584938 69 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 RNU6-1244P-201ENST00000363614 108 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR181B2-201ENST00000385004 89 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR599-201ENST00000385069 95 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNA5SP89-201ENST00000410300 108 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU7-195P-201ENST00000458793 62 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU7-106P-201ENST00000459514 67 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU6-168P-201ENST00000516189 101 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU6-162P-201ENST00000516228 103 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 AC103810.7-201ENST00000607821 91 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 SNORD18A-201ENST00000363753 72 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 MIR4714-201ENST00000580728 77 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 AP001318.4-201ENST00000616637 121 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 RNU6-813P-201ENST00000384691 107 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.677-201ENST00000516401 85 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 AC025521.1-201ENST00000621624 286 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.93-201ENST00000363066 109 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 SNORD115-24-201ENST00000363528 82 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.348-201ENST00000365403 103 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 RNU6-243P-201ENST00000391140 107 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 RNA5SP94-201ENST00000516917 108 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.78□□□□□ -2.28
CCM2LQ9NUG4 MTATP8P2-201ENST00000435212 202 ntBASIC0.78□□□□□ -2.28
CCM2LQ9NUG4 SNORA40.13-201ENST00000516379 120 ntBASIC0.78□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 SNORD28-201ENST00000384706 75 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.705-201ENST00000516862 110 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNU6-640P-201ENST00000363693 105 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNU6-905P-201ENST00000384434 107 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 MTATP6P29-201ENST00000415057 132 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 AL161932.1-201ENST00000437408 146 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNU6-158P-201ENST00000517104 100 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNA5SP47-201ENST00000517230 109 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 AL513043.2-201ENST00000573941 143 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 U7.3-201ENST00000616123 62 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 SNORD114-23-201ENST00000363536 72 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 RNU6-887P-201ENST00000410660 100 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 AC092634.7-201ENST00000621022 103 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 AC244669.1-204ENST00000621564 178 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 SNORD36A-201ENST00000362874 73 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 RNU6-524P-201ENST00000384270 107 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 RNU6-972P-201ENST00000391208 107 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 RNA5SP403-201ENST00000363598 108 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.290-201ENST00000364879 114 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 snoU13.11-201ENST00000459219 104 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 RNU7-104P-201ENST00000459398 79 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 MIR2052-201ENST00000636055 55 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 AC010487.4-201ENST00000637027 61 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 RNU6-957P-201ENST00000363652 99 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 MIR488-201ENST00000365739 83 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNU6-466P-201ENST00000391224 103 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNY4P30-201ENST00000410216 95 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 SNORD71-201ENST00000411292 86 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNA5SP330-201ENST00000517096 96 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNU7-161P-201ENST00000517289 62 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 MIR6828-201ENST00000636181 60 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.190-201ENST00000363964 101 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 SNORD58A-201ENST00000383875 65 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 SNORA8.2-201ENST00000384372 139 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 MALAT1.1-201ENST00000618249 95 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 RNU6-1131P-201ENST00000364955 107 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms