Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC103810.8-201ENST00000607347 118 ntBASIC1.99□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-382P-201ENST00000365181 106 ntBASIC1.98□□□□□ -2.09
NUCKS1Q9H1E3 U3.27-201ENST00000391237 200 ntBASIC1.98□□□□□ -2.09
NUCKS1Q9H1E3 RNU7-40P-201ENST00000516397 64 ntBASIC1.98□□□□□ -2.09
NUCKS1Q9H1E3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.98□□□□□ -2.09
NUCKS1Q9H1E3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 SNORA75.2-201ENST00000391138 150 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 SNORA75.3-201ENST00000391231 150 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 RPS26P5-201ENST00000418544 335 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 AC244505.6-201ENST00000452829 130 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 AC048334.1-201ENST00000477975 159 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-752P-201ENST00000516376 102 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 MIR4419B-201ENST00000577260 68 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 MIR3937-201ENST00000580135 106 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 MIR4676-201ENST00000583078 72 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 AC008608.1-201ENST00000603910 127 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 AC103706.3-201ENST00000636297 85 ntBASIC1.97□□□□□ -2.09
NUCKS1Q9H1E3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.96□□□□□ -2.1
NUCKS1Q9H1E3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.96□□□□□ -2.1
NUCKS1Q9H1E3 MIR504-201ENST00000385065 83 ntBASIC1.96□□□□□ -2.1
NUCKS1Q9H1E3 RNU6-364P-201ENST00000384387 107 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 RNU6-997P-201ENST00000384725 107 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 MIR583-201ENST00000384846 75 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 AC244098.3-201ENST00000424803 96 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 AL512310.8-201ENST00000550183 120 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 AC104984.5-201ENST00000586878 94 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 MIR6845-201ENST00000613182 61 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 AC106800.4-201ENST00000614905 153 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 MIR7843-201ENST00000622274 79 ntBASIC1.95□□□□□ -2.1
NUCKS1Q9H1E3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 SNORD33-201ENST00000362761 85 ntBASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 MIR764-201ENST00000390811 85 ntBASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 SNORD111-201ENST00000408139 94 ntBASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 RNA5SP182-201ENST00000516064 82 ntBASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 RNU6-295P-201ENST00000516901 104 ntBASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 AL078603.1-201ENST00000603824 313 ntBASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 AL109933.3-201ENST00000619095 188 ntBASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.94□□□□□ -2.1
NUCKS1Q9H1E3 SNORD115-44-201ENST00000365391 82 ntBASIC1.93□□□□□ -2.1
NUCKS1Q9H1E3 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
NUCKS1Q9H1E3 MIR938-201ENST00000401216 83 ntBASIC1.93□□□□□ -2.1
NUCKS1Q9H1E3 RNU7-102P-201ENST00000458948 62 ntBASIC1.93□□□□□ -2.1
NUCKS1Q9H1E3 AC023827.1-201ENST00000569247 97 ntBASIC1.93□□□□□ -2.1
NUCKS1Q9H1E3 AC027335.2-201ENST00000624030 375 ntBASIC1.93□□□□□ -2.1
NUCKS1Q9H1E3 SNORD48-201ENST00000364953 64 ntBASIC1.92□□□□□ -2.1
NUCKS1Q9H1E3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.92□□□□□ -2.1
NUCKS1Q9H1E3 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
NUCKS1Q9H1E3 AC110620.1-201ENST00000416042 228 ntBASIC1.92□□□□□ -2.1
NUCKS1Q9H1E3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NUCKS1Q9H1E3 RNU6-369P-201ENST00000362515 102 ntBASIC1.91□□□□□ -2.1
NUCKS1Q9H1E3 AL591806.2-201ENST00000433122 173 ntBASIC1.91□□□□□ -2.1
NUCKS1Q9H1E3 MIR4285-201ENST00000581001 85 ntBASIC1.91□□□□□ -2.1
NUCKS1Q9H1E3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NUCKS1Q9H1E3 RNU6-669P-201ENST00000365575 107 ntBASIC1.9□□□□□ -2.11
NUCKS1Q9H1E3 SNORA40.6-201ENST00000391153 128 ntBASIC1.9□□□□□ -2.11
NUCKS1Q9H1E3 AL691482.2-201ENST00000457453 84 ntBASIC1.9□□□□□ -2.11
NUCKS1Q9H1E3 SNORA31.2-201ENST00000516019 134 ntBASIC1.9□□□□□ -2.11
NUCKS1Q9H1E3 RNU6-982P-201ENST00000516216 102 ntBASIC1.9□□□□□ -2.11
NUCKS1Q9H1E3 RNU7-13P-201ENST00000516413 62 ntBASIC1.9□□□□□ -2.11
NUCKS1Q9H1E3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NUCKS1Q9H1E3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.89□□□□□ -2.11
NUCKS1Q9H1E3 SNORD75.2-201ENST00000408784 58 ntBASIC1.89□□□□□ -2.11
NUCKS1Q9H1E3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.89□□□□□ -2.11
NUCKS1Q9H1E3 MIR548AG2-201ENST00000581228 64 ntBASIC1.89□□□□□ -2.11
NUCKS1Q9H1E3 MIR4804-201ENST00000581683 73 ntBASIC1.89□□□□□ -2.11
NUCKS1Q9H1E3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.88□□□□□ -2.11
NUCKS1Q9H1E3 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
NUCKS1Q9H1E3 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
NUCKS1Q9H1E3 MIR3124-201ENST00000582636 67 ntBASIC1.88□□□□□ -2.11
NUCKS1Q9H1E3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
NUCKS1Q9H1E3 AC069503.3-201ENST00000618674 145 ntBASIC1.88□□□□□ -2.11
NUCKS1Q9H1E3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 MIR633-201ENST00000384821 98 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 snoU13.23-201ENST00000458863 104 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 RN7SKP88-201ENST00000516847 250 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 7SK.8-201ENST00000612110 250 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 7SK.11-201ENST00000615477 250 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 7SK.13-201ENST00000622040 250 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NUCKS1Q9H1E3 RNU6-495P-201ENST00000362995 107 ntBASIC1.86□□□□□ -2.11
NUCKS1Q9H1E3 RNA5SP403-201ENST00000363598 108 ntBASIC1.86□□□□□ -2.11
NUCKS1Q9H1E3 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
NUCKS1Q9H1E3 AL591704.2-201ENST00000421658 181 ntBASIC1.86□□□□□ -2.11
NUCKS1Q9H1E3 RNU7-56P-201ENST00000458744 62 ntBASIC1.86□□□□□ -2.11
NUCKS1Q9H1E3 RNU7-24P-201ENST00000458867 62 ntBASIC1.86□□□□□ -2.11
NUCKS1Q9H1E3 SNORA31.14-201ENST00000516728 116 ntBASIC1.86□□□□□ -2.11
NUCKS1Q9H1E3 SNORD115-24-201ENST00000363528 82 ntBASIC1.85□□□□□ -2.11
NUCKS1Q9H1E3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.85□□□□□ -2.11
NUCKS1Q9H1E3 RNU7-21P-201ENST00000459430 62 ntBASIC1.85□□□□□ -2.11
NUCKS1Q9H1E3 RNU6-977P-201ENST00000516411 103 ntBASIC1.85□□□□□ -2.11
NUCKS1Q9H1E3 NAMPTP3-201ENST00000569273 224 ntBASIC1.85□□□□□ -2.11
NUCKS1Q9H1E3 MIR3920-201ENST00000581751 86 ntBASIC1.85□□□□□ -2.11
NUCKS1Q9H1E3 MIR8081-201ENST00000611533 95 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms