Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RNU6-411P-201ENST00000384451 107 ntBASIC1.78□□□□□ -2.12
PHACTR1Q9C0D0 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
PHACTR1Q9C0D0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.78□□□□□ -2.12
PHACTR1Q9C0D0 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
PHACTR1Q9C0D0 MIR4484-201ENST00000582855 83 ntBASIC1.78□□□□□ -2.12
PHACTR1Q9C0D0 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
PHACTR1Q9C0D0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 RNU6-935P-201ENST00000410371 100 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 AC074348.1-201ENST00000426503 132 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 AL603825.1-201ENST00000438481 80 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 snoU13.17-201ENST00000458802 104 ntBASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
PHACTR1Q9C0D0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.76□□□□□ -2.13
PHACTR1Q9C0D0 AC067940.1-201ENST00000458411 300 ntBASIC1.76□□□□□ -2.13
PHACTR1Q9C0D0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PHACTR1Q9C0D0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.75□□□□□ -2.13
PHACTR1Q9C0D0 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
PHACTR1Q9C0D0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.75□□□□□ -2.13
PHACTR1Q9C0D0 MIR4781-201ENST00000585250 76 ntBASIC1.75□□□□□ -2.13
PHACTR1Q9C0D0 RNU6-788P-201ENST00000390967 104 ntBASIC1.74□□□□□ -2.13
PHACTR1Q9C0D0 MIR1827-201ENST00000408549 66 ntBASIC1.74□□□□□ -2.13
PHACTR1Q9C0D0 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
PHACTR1Q9C0D0 MIR520F-201ENST00000384824 87 ntBASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 RNU6-70P-201ENST00000516438 60 ntBASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 MIR4285-201ENST00000581001 85 ntBASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 MIR3140-201ENST00000583685 90 ntBASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 AL157834.3-201ENST00000615543 103 ntBASIC1.73□□□□□ -2.13
PHACTR1Q9C0D0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.72□□□□□ -2.13
PHACTR1Q9C0D0 MIR451A-201ENST00000385059 72 ntBASIC1.72□□□□□ -2.13
PHACTR1Q9C0D0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.72□□□□□ -2.13
PHACTR1Q9C0D0 AC114801.3-201ENST00000510231 177 ntBASIC1.72□□□□□ -2.13
PHACTR1Q9C0D0 uc_338.16-201ENST00000621804 95 ntBASIC1.72□□□□□ -2.13
PHACTR1Q9C0D0 ZNF209P-201ENST00000593450 2304 ntBASIC1.72□□□□□ -2.13
PHACTR1Q9C0D0 SNORD115-44-201ENST00000365391 82 ntBASIC1.71□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-871P-201ENST00000516122 100 ntBASIC1.71□□□□□ -2.14
PHACTR1Q9C0D0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.7□□□□□ -2.14
PHACTR1Q9C0D0 MIR222-201ENST00000384992 110 ntBASIC1.7□□□□□ -2.14
PHACTR1Q9C0D0 SNORA31.14-201ENST00000516728 116 ntBASIC1.7□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-1015P-201ENST00000517121 99 ntBASIC1.7□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-1057P-201ENST00000517162 102 ntBASIC1.7□□□□□ -2.14
PHACTR1Q9C0D0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
PHACTR1Q9C0D0 Y_RNA.36-201ENST00000362602 112 ntBASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-340P-201ENST00000364005 107 ntBASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 RNU2-59P-201ENST00000410482 191 ntBASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 AC002429.1-201ENST00000437672 148 ntBASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 RMST_2.1-201ENST00000617263 136 ntBASIC1.69□□□□□ -2.14
PHACTR1Q9C0D0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-681P-201ENST00000364012 104 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 SNORA24B-201ENST00000384176 131 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 MIR942-201ENST00000401111 86 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 AC097510.1-201ENST00000510945 133 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-287P-201ENST00000516230 98 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 MIR6845-201ENST00000613182 61 ntBASIC1.68□□□□□ -2.14
PHACTR1Q9C0D0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 U3.27-201ENST00000391237 200 ntBASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 Y_RNA.606-201ENST00000410579 103 ntBASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 RNU7-13P-201ENST00000516413 62 ntBASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-687P-201ENST00000516443 89 ntBASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-719P-201ENST00000516671 104 ntBASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
PHACTR1Q9C0D0 SNORD115-24-201ENST00000363528 82 ntBASIC1.66□□□□□ -2.14
PHACTR1Q9C0D0 SNORA8.1-201ENST00000384250 140 ntBASIC1.66□□□□□ -2.14
PHACTR1Q9C0D0 RNU6-154P-201ENST00000384306 106 ntBASIC1.66□□□□□ -2.14
PHACTR1Q9C0D0 SNORA25-201ENST00000384384 134 ntBASIC1.66□□□□□ -2.14
PHACTR1Q9C0D0 RNA5SP247-201ENST00000411181 105 ntBASIC1.66□□□□□ -2.14
PHACTR1Q9C0D0 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
PHACTR1Q9C0D0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.66□□□□□ -2.14
PHACTR1Q9C0D0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PHACTR1Q9C0D0 RNA5SP403-201ENST00000363598 108 ntBASIC1.65□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-587P-201ENST00000391282 106 ntBASIC1.65□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-634P-201ENST00000459134 106 ntBASIC1.65□□□□□ -2.15
PHACTR1Q9C0D0 MIR664A-201ENST00000626086 82 ntBASIC1.65□□□□□ -2.15
PHACTR1Q9C0D0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.64□□□□□ -2.15
PHACTR1Q9C0D0 U6.81-201ENST00000612550 106 ntBASIC1.64□□□□□ -2.15
PHACTR1Q9C0D0 AL136317.1-201ENST00000612653 226 ntBASIC1.64□□□□□ -2.15
PHACTR1Q9C0D0 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
PHACTR1Q9C0D0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-539P-201ENST00000516665 103 ntBASIC1.63□□□□□ -2.15
PHACTR1Q9C0D0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-330P-201ENST00000363015 107 ntBASIC1.62□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-824P-201ENST00000363724 104 ntBASIC1.62□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-590P-201ENST00000365039 107 ntBASIC1.62□□□□□ -2.15
PHACTR1Q9C0D0 MIR2113-201ENST00000459007 91 ntBASIC1.62□□□□□ -2.15
PHACTR1Q9C0D0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.62□□□□□ -2.15
PHACTR1Q9C0D0 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 1283.8 ms