Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.08□□□□□ -2.24
TRIM55Q9BYV6 Y_RNA.17-201ENST00000362433 111 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 SNORD116-10-201ENST00000363791 102 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 RNA5SP245-201ENST00000364239 121 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 Y_RNA.558-201ENST00000384685 113 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 MIR635-201ENST00000384830 98 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 Y_RNA.593-201ENST00000410292 98 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 AC092628.1-201ENST00000436250 252 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 RNU7-195P-201ENST00000458793 62 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 MIR6515-201ENST00000619843 57 ntBASIC1.07□□□□□ -2.24
TRIM55Q9BYV6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 RNU6-402P-201ENST00000410678 103 ntBASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 RNA5SP222-201ENST00000411039 105 ntBASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 AL161932.1-201ENST00000437408 146 ntBASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 MIR6788-201ENST00000618842 66 ntBASIC1.06□□□□□ -2.24
TRIM55Q9BYV6 MIR18A-201ENST00000362310 71 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 RNU6-243P-201ENST00000391140 107 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 MIR548J-201ENST00000408833 112 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 snoU13.11-201ENST00000459219 104 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 RNA5SP480-201ENST00000516840 109 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 AC138907.6-201ENST00000568401 126 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 AC138869.1-201ENST00000568623 124 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 MIR151B-201ENST00000584249 96 ntBASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRIM55Q9BYV6 Y_RNA.73-201ENST00000362910 113 ntBASIC1.04□□□□□ -2.24
TRIM55Q9BYV6 RNU6-1254P-201ENST00000391266 104 ntBASIC1.04□□□□□ -2.24
TRIM55Q9BYV6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
TRIM55Q9BYV6 AC062037.1-201ENST00000605302 128 ntBASIC1.04□□□□□ -2.24
TRIM55Q9BYV6 SNORD36A-201ENST00000362874 73 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 RNU4-45P-201ENST00000365469 141 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 MIR644A-201ENST00000385262 94 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 RNU6-469P-201ENST00000516253 101 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 MIR4668-201ENST00000582284 70 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 PVT1_3.1-201ENST00000620853 95 ntBASIC1.03□□□□□ -2.24
TRIM55Q9BYV6 Y_RNA.388-201ENST00000383919 113 ntBASIC1.02□□□□□ -2.25
TRIM55Q9BYV6 SNORD116-22-201ENST00000384430 92 ntBASIC1.02□□□□□ -2.25
TRIM55Q9BYV6 RNY4P29-201ENST00000410801 97 ntBASIC1.02□□□□□ -2.25
TRIM55Q9BYV6 RNU6-957P-201ENST00000363652 99 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 RNY1P1-201ENST00000364372 112 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 SNORA26.2-201ENST00000390922 122 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 RNU6-519P-201ENST00000410590 108 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 AC097635.1-201ENST00000450678 155 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 RNU7-85P-201ENST00000458851 63 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 Y_RNA.809-201ENST00000516058 95 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 MIR3678-201ENST00000578455 94 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 IGLL4P-201ENST00000614590 133 ntBASIC1.01□□□□□ -2.25
TRIM55Q9BYV6 RNU4-32P-201ENST00000363404 141 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 Y_RNA.221-201ENST00000364248 96 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 SNORD115-27-201ENST00000364430 82 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 MIR519A1-201ENST00000385257 85 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 AL606490.4-201ENST00000423117 127 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 AC244505.6-201ENST00000452829 130 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 RNU6-135P-201ENST00000516769 101 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1□□□□□ -2.25
TRIM55Q9BYV6 RNU6-219P-201ENST00000364728 107 ntBASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 RNY1P8-201ENST00000383970 114 ntBASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 SNORA36.2-201ENST00000384004 127 ntBASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 RNU6-110P-201ENST00000384508 104 ntBASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 MIR450A2-201ENST00000385022 100 ntBASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 RNA5SP436-201ENST00000516020 115 ntBASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.99□□□□□ -2.25
TRIM55Q9BYV6 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
TRIM55Q9BYV6 RNU6-524P-201ENST00000384270 107 ntBASIC0.98□□□□□ -2.25
TRIM55Q9BYV6 Y_RNA.620-201ENST00000411009 88 ntBASIC0.98□□□□□ -2.25
TRIM55Q9BYV6 RNU6-592P-201ENST00000411333 103 ntBASIC0.98□□□□□ -2.25
TRIM55Q9BYV6 SNORD18A-201ENST00000363753 72 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 RNU6-497P-201ENST00000365316 104 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 RNU6-466P-201ENST00000391224 103 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 Y_RNA.611-201ENST00000410682 108 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 SNORD4B-201ENST00000459083 72 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 Y_RNA.648-201ENST00000459455 110 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 AC022137.1-201ENST00000483735 151 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 RN7SKP12-201ENST00000516275 143 ntBASIC0.97□□□□□ -2.25
TRIM55Q9BYV6 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
TRIM55Q9BYV6 Y_RNA.283-201ENST00000364798 112 ntBASIC0.96□□□□□ -2.26
TRIM55Q9BYV6 RNU6-573P-201ENST00000383938 106 ntBASIC0.96□□□□□ -2.26
TRIM55Q9BYV6 MIR598-201ENST00000384868 97 ntBASIC0.96□□□□□ -2.26
TRIM55Q9BYV6 MIR4536-1-201ENST00000583537 88 ntBASIC0.96□□□□□ -2.26
TRIM55Q9BYV6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.96□□□□□ -2.26
TRIM55Q9BYV6 MIRLET7F1-201ENST00000362202 87 ntBASIC0.95□□□□□ -2.26
TRIM55Q9BYV6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
TRIM55Q9BYV6 RNA5SP173-201ENST00000364857 136 ntBASIC0.95□□□□□ -2.26
TRIM55Q9BYV6 RNU6-65P-201ENST00000516332 98 ntBASIC0.95□□□□□ -2.26
TRIM55Q9BYV6 MIR4639-201ENST00000584938 69 ntBASIC0.95□□□□□ -2.26
TRIM55Q9BYV6 TRDV1-202ENST00000621643 102 ntBASIC0.95□□□□□ -2.26
TRIM55Q9BYV6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TRIM55Q9BYV6 RNU6-1260P-201ENST00000362944 107 ntBASIC0.94□□□□□ -2.26
TRIM55Q9BYV6 SNORD115-24-201ENST00000363528 82 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms