Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR4422-201ENST00000581938 83 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 ZNF209P-201ENST00000593450 2304 ntBASIC1.38□□□□□ -2.19
SSBP3Q9BWW4 RNU6-997P-201ENST00000384725 107 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 SNORA67.5-201ENST00000391036 107 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 SNORA75.2-201ENST00000391138 150 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 SNORA75.3-201ENST00000391231 150 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 RNU1-78P-201ENST00000391248 165 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 SNORD30.1-201ENST00000391309 70 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 MIR942-201ENST00000401111 86 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 RNU6-935P-201ENST00000410371 100 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 AC023827.1-201ENST00000569247 97 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 MIR3140-201ENST00000583685 90 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SSBP3Q9BWW4 SNORD48-201ENST00000364953 64 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 Y_RNA.340-201ENST00000365330 92 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 RNU6-1241P-201ENST00000384536 107 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 RNU6-291P-201ENST00000384720 107 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 RNU2-59P-201ENST00000410482 191 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 RNU6-994P-201ENST00000410507 111 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 AC097510.1-201ENST00000510945 133 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 RNU7-40P-201ENST00000516397 64 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
SSBP3Q9BWW4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 RNU6-154P-201ENST00000384306 106 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 MIR451A-201ENST00000385059 72 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 Y_RNA.606-201ENST00000410579 103 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 RNU6-1052P-201ENST00000411398 104 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 RNU6-977P-201ENST00000516411 103 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 RNU6-719P-201ENST00000516671 104 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 AC008608.1-201ENST00000603910 127 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.35□□□□□ -2.19
SSBP3Q9BWW4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 SNORA80D-201ENST00000384488 135 ntBASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 RNU7-102P-201ENST00000458948 62 ntBASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 MIR3675-201ENST00000583661 73 ntBASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
SSBP3Q9BWW4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 RNA5SP245-201ENST00000364239 121 ntBASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 RNU6-540P-201ENST00000384622 101 ntBASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 RNU1-119P-201ENST00000391122 165 ntBASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 RNU7-21P-201ENST00000459430 62 ntBASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 BX248123.2-201ENST00000606318 124 ntBASIC1.33□□□□□ -2.2
SSBP3Q9BWW4 MIR1-1-201ENST00000362147 71 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 RNU6-330P-201ENST00000363015 107 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 SNORD115-44-201ENST00000365391 82 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 SNORA24B-201ENST00000384176 131 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 MIR100-201ENST00000385259 80 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 U3.27-201ENST00000391237 200 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 AC108667.1-201ENST00000428618 249 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 AC244505.6-201ENST00000452829 130 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.32□□□□□ -2.2
SSBP3Q9BWW4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SSBP3Q9BWW4 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
SSBP3Q9BWW4 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
SSBP3Q9BWW4 RNU6-663P-201ENST00000391105 106 ntBASIC1.31□□□□□ -2.2
SSBP3Q9BWW4 SNORA17.3-201ENST00000391159 129 ntBASIC1.31□□□□□ -2.2
SSBP3Q9BWW4 RNU6-287P-201ENST00000516230 98 ntBASIC1.31□□□□□ -2.2
SSBP3Q9BWW4 MIR4804-201ENST00000581683 73 ntBASIC1.31□□□□□ -2.2
SSBP3Q9BWW4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 MIR517C-201ENST00000385103 95 ntBASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 AC067940.1-201ENST00000458411 300 ntBASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 RNU7-56P-201ENST00000458744 62 ntBASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 MIR4285-201ENST00000581001 85 ntBASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 U6.81-201ENST00000612550 106 ntBASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 U6.111-201ENST00000636093 83 ntBASIC1.3□□□□□ -2.2
SSBP3Q9BWW4 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 RNU6-824P-201ENST00000363724 104 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 RNU6-895P-201ENST00000384125 103 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 RNU6-800P-201ENST00000384473 103 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 RNU6-1177P-201ENST00000391058 104 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 AL603825.1-201ENST00000438481 80 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 RNU7-13P-201ENST00000516413 62 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 MIR4303-201ENST00000581299 66 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 AL359821.1-201ENST00000605519 182 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 MIR8053-201ENST00000613344 75 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
SSBP3Q9BWW4 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
SSBP3Q9BWW4 SNORD115-31-201ENST00000365318 82 ntBASIC1.28□□□□□ -2.2
SSBP3Q9BWW4 MIR520F-201ENST00000384824 87 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms