Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 MIR513C-201ENST00000401352 84 ntBASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 RNA5SP136-201ENST00000410906 107 ntBASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 AC096531.1-201ENST00000419107 107 ntBASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 RNA5SP67-201ENST00000516422 131 ntBASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 SNORA81.3-201ENST00000517283 198 ntBASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 RN7SL660P-201ENST00000614852 299 ntBASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 AC021753.1-201ENST00000635724 168 ntBASIC-0.33□□□□□ -2.46
KLHDC3Q9BQ90 MIR516A2-201ENST00000384888 90 ntBASIC-0.34□□□□□ -2.46
KLHDC3Q9BQ90 MIR224-201ENST00000384889 81 ntBASIC-0.34□□□□□ -2.46
KLHDC3Q9BQ90 MIR516A1-201ENST00000385033 90 ntBASIC-0.34□□□□□ -2.46
KLHDC3Q9BQ90 RN7SKP19-201ENST00000516016 252 ntBASIC-0.34□□□□□ -2.46
KLHDC3Q9BQ90 MIR4636-201ENST00000582271 80 ntBASIC-0.34□□□□□ -2.46
KLHDC3Q9BQ90 AC069503.3-201ENST00000618674 145 ntBASIC-0.34□□□□□ -2.46
KLHDC3Q9BQ90 MIR6086-201ENST00000638065 55 ntBASIC-0.34□□□□□ -2.46
KLHDC3Q9BQ90 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.35□□□□□ -2.47
KLHDC3Q9BQ90 MIR519E-201ENST00000385075 84 ntBASIC-0.35□□□□□ -2.47
KLHDC3Q9BQ90 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.35□□□□□ -2.47
KLHDC3Q9BQ90 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.35□□□□□ -2.47
KLHDC3Q9BQ90 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.35□□□□□ -2.47
KLHDC3Q9BQ90 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.47
KLHDC3Q9BQ90 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 RNA5SP25-201ENST00000410815 110 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 AC093423.1-201ENST00000440817 142 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 SNORD57-201ENST00000448188 72 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-388P-201ENST00000517012 105 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-389P-201ENST00000517048 105 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 AP001328.1-201ENST00000528550 176 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 MIR548AG2-201ENST00000581228 64 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 AP001340.1-201ENST00000624405 217 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 MIR1255B1-201ENST00000636325 63 ntBASIC-0.36□□□□□ -2.47
KLHDC3Q9BQ90 MIR101-1-201ENST00000362265 75 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-30P-201ENST00000384561 107 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 MIR4473-201ENST00000583731 91 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 MIR4493-201ENST00000584016 73 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 AC099654.10-201ENST00000640395 161 ntBASIC-0.37□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.38□□□□□ -2.47
KLHDC3Q9BQ90 SNORD49B-201ENST00000365172 72 ntBASIC-0.38□□□□□ -2.47
KLHDC3Q9BQ90 SNORD116-18-201ENST00000383961 92 ntBASIC-0.38□□□□□ -2.47
KLHDC3Q9BQ90 MIR2113-201ENST00000459007 91 ntBASIC-0.38□□□□□ -2.47
KLHDC3Q9BQ90 AC108676.2-201ENST00000605225 163 ntBASIC-0.38□□□□□ -2.47
KLHDC3Q9BQ90 AC004792.1-201ENST00000614523 137 ntBASIC-0.38□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 MIR548D2-201ENST00000384955 97 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-243P-201ENST00000391140 107 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 MIR1263-201ENST00000408324 86 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 YWHAEP2-201ENST00000580066 112 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 MIR4802-201ENST00000581881 80 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 TRDV1-202ENST00000621643 102 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 uc_338.10-201ENST00000621872 182 ntBASIC-0.39□□□□□ -2.47
KLHDC3Q9BQ90 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 MIR181B2-201ENST00000385004 89 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 SNORA7.5-201ENST00000410672 110 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 MIR4460-201ENST00000577862 86 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 MIR548X2-201ENST00000579776 100 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 AL512310.12-203ENST00000640543 90 ntBASIC-0.4□□□□□ -2.47
KLHDC3Q9BQ90 SNORD36A-201ENST00000362874 73 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNU6-363P-201ENST00000362895 105 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 SNORD38.1-201ENST00000363863 68 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 SNORA51.5-201ENST00000384126 131 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 MIR196A2-201ENST00000385189 110 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNU6-735P-201ENST00000410612 107 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNU6-394P-201ENST00000410735 107 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNU4-63P-201ENST00000411313 118 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 SPINT5P-201ENST00000448174 155 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNU6-287P-201ENST00000516230 98 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNU7-188P-201ENST00000517063 64 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNU6-90P-201ENST00000606352 106 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 U7.2-201ENST00000607576 63 ntBASIC-0.41□□□□□ -2.48
KLHDC3Q9BQ90 RNY4P3-201ENST00000365254 95 ntBASIC-0.42□□□□□ -2.48
KLHDC3Q9BQ90 SNORD14C-201ENST00000365382 88 ntBASIC-0.42□□□□□ -2.48
KLHDC3Q9BQ90 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.42□□□□□ -2.48
KLHDC3Q9BQ90 MIR548G-201ENST00000408442 89 ntBASIC-0.42□□□□□ -2.48
KLHDC3Q9BQ90 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.42□□□□□ -2.48
KLHDC3Q9BQ90 AL162726.3-218ENST00000636401 95 ntBASIC-0.42□□□□□ -2.48
KLHDC3Q9BQ90 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.43□□□□□ -2.48
KLHDC3Q9BQ90 SNORD114-29-201ENST00000364819 70 ntBASIC-0.43□□□□□ -2.48
KLHDC3Q9BQ90 RNA5SP300-201ENST00000391197 107 ntBASIC-0.43□□□□□ -2.48
KLHDC3Q9BQ90 AL158147.1-201ENST00000443970 75 ntBASIC-0.43□□□□□ -2.48
KLHDC3Q9BQ90 MIR4263-201ENST00000584745 83 ntBASIC-0.43□□□□□ -2.48
KLHDC3Q9BQ90 U6.100-201ENST00000636230 99 ntBASIC-0.43□□□□□ -2.48
KLHDC3Q9BQ90 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.43□□□□□ -2.48
KLHDC3Q9BQ90 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.44□□□□□ -2.48
KLHDC3Q9BQ90 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.44□□□□□ -2.48
KLHDC3Q9BQ90 MT-TY-201ENST00000387409 66 ntBASIC-0.44□□□□□ -2.48
KLHDC3Q9BQ90 AC244250.2-201ENST00000418731 148 ntBASIC-0.44□□□□□ -2.48
KLHDC3Q9BQ90 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms