Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR1302-5-201ENST00000408164 150 ntBASIC0.65□□□□□ -2.31
TRIM43Q96BQ3 RNU6-589P-201ENST00000516485 107 ntBASIC0.65□□□□□ -2.31
TRIM43Q96BQ3 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.64□□□□□ -2.31
TRIM43Q96BQ3 SNORD45B-201ENST00000364617 72 ntBASIC0.64□□□□□ -2.31
TRIM43Q96BQ3 SNORD28-201ENST00000384706 75 ntBASIC0.64□□□□□ -2.31
TRIM43Q96BQ3 MIR519A1-201ENST00000385257 85 ntBASIC0.64□□□□□ -2.31
TRIM43Q96BQ3 SNORD71-201ENST00000411292 86 ntBASIC0.64□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.64□□□□□ -2.31
TRIM43Q96BQ3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.64□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1290P-201ENST00000362957 109 ntBASIC0.63□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.63□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.173-201ENST00000363776 113 ntBASIC0.63□□□□□ -2.31
TRIM43Q96BQ3 RNU7-195P-201ENST00000458793 62 ntBASIC0.63□□□□□ -2.31
TRIM43Q96BQ3 RNA5SP47-201ENST00000517230 109 ntBASIC0.63□□□□□ -2.31
TRIM43Q96BQ3 AC244669.1-204ENST00000621564 178 ntBASIC0.63□□□□□ -2.31
TRIM43Q96BQ3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.63□□□□□ -2.31
TRIM43Q96BQ3 RNA5SP517-201ENST00000364724 117 ntBASIC0.62□□□□□ -2.31
TRIM43Q96BQ3 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.709-201ENST00000516952 92 ntBASIC0.62□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1325P-201ENST00000364905 105 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 MIR516A2-201ENST00000384888 90 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 MIR516A1-201ENST00000385033 90 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 SNORA40.8-201ENST00000411034 126 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 RNA5SP227-201ENST00000516184 113 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 RNA5SP268-201ENST00000516828 124 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 AC091304.10-201ENST00000641554 121 ntBASIC0.61□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1125P-201ENST00000363601 107 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 RNU6-480P-201ENST00000384332 107 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 SNORA8.2-201ENST00000384372 139 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 RNU7-106P-201ENST00000459514 67 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 RN7SKP12-201ENST00000516275 143 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 MIR4439-201ENST00000583746 80 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.78-201ENST00000362970 110 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 SNORA36.1-201ENST00000363424 132 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1113P-201ENST00000384348 107 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 RNU6-243P-201ENST00000391140 107 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 MIR548L-201ENST00000408303 86 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 Y_RNA.601-201ENST00000410500 113 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 RNU7-104P-201ENST00000459398 79 ntBASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.59□□□□□ -2.31
TRIM43Q96BQ3 RNU6-1163P-201ENST00000364516 107 ntBASIC0.58□□□□□ -2.32
TRIM43Q96BQ3 AC109327.2-201ENST00000448339 378 ntBASIC0.58□□□□□ -2.32
TRIM43Q96BQ3 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
TRIM43Q96BQ3 uc_338.28-201ENST00000612082 187 ntBASIC0.58□□□□□ -2.32
TRIM43Q96BQ3 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
TRIM43Q96BQ3 MIR6828-201ENST00000636181 60 ntBASIC0.58□□□□□ -2.32
TRIM43Q96BQ3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
TRIM43Q96BQ3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TRIM43Q96BQ3 RNU6-524P-201ENST00000384270 107 ntBASIC0.57□□□□□ -2.32
TRIM43Q96BQ3 RNU6-554P-201ENST00000410466 106 ntBASIC0.57□□□□□ -2.32
TRIM43Q96BQ3 MIR3613-201ENST00000579844 87 ntBASIC0.57□□□□□ -2.32
TRIM43Q96BQ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
TRIM43Q96BQ3 AC067863.3-201ENST00000624172 122 ntBASIC0.57□□□□□ -2.32
TRIM43Q96BQ3 Y_RNA.95-201ENST00000363079 95 ntBASIC0.56□□□□□ -2.32
TRIM43Q96BQ3 RNA5SP403-201ENST00000363598 108 ntBASIC0.56□□□□□ -2.32
TRIM43Q96BQ3 RNU6-106P-201ENST00000384405 107 ntBASIC0.56□□□□□ -2.32
TRIM43Q96BQ3 RNU6-35P-201ENST00000384530 107 ntBASIC0.56□□□□□ -2.32
TRIM43Q96BQ3 MIR518A1-201ENST00000385068 85 ntBASIC0.56□□□□□ -2.32
TRIM43Q96BQ3 RNU6-904P-201ENST00000516206 101 ntBASIC0.56□□□□□ -2.32
TRIM43Q96BQ3 RNU7-161P-201ENST00000517289 62 ntBASIC0.56□□□□□ -2.32
TRIM43Q96BQ3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.55□□□□□ -2.32
TRIM43Q96BQ3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.55□□□□□ -2.32
TRIM43Q96BQ3 SNORA51.5-201ENST00000384126 131 ntBASIC0.55□□□□□ -2.32
TRIM43Q96BQ3 HAR1A.1-201ENST00000459583 118 ntBASIC0.55□□□□□ -2.32
TRIM43Q96BQ3 SCARNA23-201ENST00000516060 130 ntBASIC0.55□□□□□ -2.32
TRIM43Q96BQ3 MIR4514-201ENST00000581410 57 ntBASIC0.55□□□□□ -2.32
TRIM43Q96BQ3 RNU6-86P-201ENST00000606534 107 ntBASIC0.55□□□□□ -2.32
TRIM43Q96BQ3 SNORD118-201ENST00000363593 134 ntBASIC0.54□□□□□ -2.32
TRIM43Q96BQ3 RNY4P18-201ENST00000391107 89 ntBASIC0.54□□□□□ -2.32
TRIM43Q96BQ3 SNORA19.1-201ENST00000410656 129 ntBASIC0.54□□□□□ -2.32
TRIM43Q96BQ3 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
TRIM43Q96BQ3 MIR7107-201ENST00000611489 80 ntBASIC0.54□□□□□ -2.32
TRIM43Q96BQ3 SNORD36A-201ENST00000362874 73 ntBASIC0.53□□□□□ -2.32
TRIM43Q96BQ3 RNU6-756P-201ENST00000383997 107 ntBASIC0.53□□□□□ -2.32
TRIM43Q96BQ3 SNORD20-201ENST00000384550 80 ntBASIC0.53□□□□□ -2.32
TRIM43Q96BQ3 MIR181B2-201ENST00000385004 89 ntBASIC0.53□□□□□ -2.32
TRIM43Q96BQ3 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
TRIM43Q96BQ3 RNU6-919P-201ENST00000516731 104 ntBASIC0.53□□□□□ -2.32
TRIM43Q96BQ3 RNU6-215P-201ENST00000365169 102 ntBASIC0.52□□□□□ -2.33
TRIM43Q96BQ3 RNU6-813P-201ENST00000384691 107 ntBASIC0.52□□□□□ -2.33
TRIM43Q96BQ3 AL031737.1-201ENST00000450125 223 ntBASIC0.52□□□□□ -2.33
TRIM43Q96BQ3 RNU6-795P-201ENST00000516323 103 ntBASIC0.52□□□□□ -2.33
TRIM43Q96BQ3 RNU7-13P-201ENST00000516413 62 ntBASIC0.52□□□□□ -2.33
TRIM43Q96BQ3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TRIM43Q96BQ3 Y_RNA.96-201ENST00000363092 109 ntBASIC0.51□□□□□ -2.33
TRIM43Q96BQ3 RNU6-466P-201ENST00000391224 103 ntBASIC0.51□□□□□ -2.33
TRIM43Q96BQ3 RNU6-766P-201ENST00000362478 107 ntBASIC0.5□□□□□ -2.33
TRIM43Q96BQ3 RNU6-726P-201ENST00000364680 107 ntBASIC0.5□□□□□ -2.33
TRIM43Q96BQ3 MIR590-201ENST00000385008 97 ntBASIC0.5□□□□□ -2.33
TRIM43Q96BQ3 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
TRIM43Q96BQ3 AC012531.4-201ENST00000616509 177 ntBASIC0.5□□□□□ -2.33
TRIM43Q96BQ3 Y_RNA.818-201ENST00000618813 71 ntBASIC0.5□□□□□ -2.33
TRIM43Q96BQ3 Y_RNA.467-201ENST00000384297 102 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms