Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.43□□□□□ -2.48
SKA1Q96BD8 MIR516A2-201ENST00000384888 90 ntBASIC-0.43□□□□□ -2.48
SKA1Q96BD8 MIR516A1-201ENST00000385033 90 ntBASIC-0.43□□□□□ -2.48
SKA1Q96BD8 MIR876-201ENST00000401147 81 ntBASIC-0.43□□□□□ -2.48
SKA1Q96BD8 MIR148A-201ENST00000362215 68 ntBASIC-0.44□□□□□ -2.48
SKA1Q96BD8 MIR516B1-201ENST00000385211 90 ntBASIC-0.44□□□□□ -2.48
SKA1Q96BD8 MT-TI-201ENST00000387365 69 ntBASIC-0.44□□□□□ -2.48
SKA1Q96BD8 MIR1263-201ENST00000408324 86 ntBASIC-0.44□□□□□ -2.48
SKA1Q96BD8 MIR548X2-201ENST00000579776 100 ntBASIC-0.44□□□□□ -2.48
SKA1Q96BD8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.44□□□□□ -2.48
SKA1Q96BD8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.45□□□□□ -2.48
SKA1Q96BD8 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
SKA1Q96BD8 MIR617-201ENST00000385030 97 ntBASIC-0.45□□□□□ -2.48
SKA1Q96BD8 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.45□□□□□ -2.48
SKA1Q96BD8 SNORD4A-201ENST00000459174 72 ntBASIC-0.45□□□□□ -2.48
SKA1Q96BD8 AC074198.2-201ENST00000508153 258 ntBASIC-0.45□□□□□ -2.48
SKA1Q96BD8 AL512310.12-203ENST00000640543 90 ntBASIC-0.45□□□□□ -2.48
SKA1Q96BD8 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.46□□□□□ -2.48
SKA1Q96BD8 RNU6-243P-201ENST00000391140 107 ntBASIC-0.47□□□□□ -2.48
SKA1Q96BD8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.47□□□□□ -2.48
SKA1Q96BD8 MIR8064-201ENST00000612863 90 ntBASIC-0.47□□□□□ -2.48
SKA1Q96BD8 AC069503.3-201ENST00000618674 145 ntBASIC-0.47□□□□□ -2.48
SKA1Q96BD8 MIR1255B1-201ENST00000636325 63 ntBASIC-0.47□□□□□ -2.48
SKA1Q96BD8 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.48□□□□□ -2.49
SKA1Q96BD8 SNORA7.5-201ENST00000410672 110 ntBASIC-0.48□□□□□ -2.49
SKA1Q96BD8 RNU6-394P-201ENST00000410735 107 ntBASIC-0.48□□□□□ -2.49
SKA1Q96BD8 SPINT5P-201ENST00000448174 155 ntBASIC-0.48□□□□□ -2.49
SKA1Q96BD8 RNU6-182P-201ENST00000516970 105 ntBASIC-0.48□□□□□ -2.49
SKA1Q96BD8 MIR101-1-201ENST00000362265 75 ntBASIC-0.49□□□□□ -2.49
SKA1Q96BD8 RNA5SP368-201ENST00000364298 116 ntBASIC-0.49□□□□□ -2.49
SKA1Q96BD8 MIR548D2-201ENST00000384955 97 ntBASIC-0.49□□□□□ -2.49
SKA1Q96BD8 MIR519E-201ENST00000385075 84 ntBASIC-0.49□□□□□ -2.49
SKA1Q96BD8 AC109327.2-201ENST00000448339 378 ntBASIC-0.49□□□□□ -2.49
SKA1Q96BD8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.49□□□□□ -2.49
SKA1Q96BD8 U7.2-201ENST00000607576 63 ntBASIC-0.49□□□□□ -2.49
SKA1Q96BD8 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.5□□□□□ -2.49
SKA1Q96BD8 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.5□□□□□ -2.49
SKA1Q96BD8 snoU13.19-201ENST00000459148 104 ntBASIC-0.5□□□□□ -2.49
SKA1Q96BD8 uc_338.10-201ENST00000621872 182 ntBASIC-0.5□□□□□ -2.49
SKA1Q96BD8 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.51□□□□□ -2.49
SKA1Q96BD8 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.51□□□□□ -2.49
SKA1Q96BD8 MIR4473-201ENST00000583731 91 ntBASIC-0.51□□□□□ -2.49
SKA1Q96BD8 RNU6-90P-201ENST00000606352 106 ntBASIC-0.51□□□□□ -2.49
SKA1Q96BD8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.51□□□□□ -2.49
SKA1Q96BD8 RNU6-363P-201ENST00000362895 105 ntBASIC-0.52□□□□□ -2.49
SKA1Q96BD8 SNORD38.1-201ENST00000363863 68 ntBASIC-0.52□□□□□ -2.49
SKA1Q96BD8 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.52□□□□□ -2.49
SKA1Q96BD8 AL158147.1-201ENST00000443970 75 ntBASIC-0.52□□□□□ -2.49
SKA1Q96BD8 MIR4460-201ENST00000577862 86 ntBASIC-0.52□□□□□ -2.49
SKA1Q96BD8 YWHAEP2-201ENST00000580066 112 ntBASIC-0.52□□□□□ -2.49
SKA1Q96BD8 MIR548AG2-201ENST00000581228 64 ntBASIC-0.52□□□□□ -2.49
SKA1Q96BD8 RNY4P3-201ENST00000365254 95 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 MIR2113-201ENST00000459007 91 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 AC108676.2-201ENST00000605225 163 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 TRDV1-202ENST00000621643 102 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.53□□□□□ -2.49
SKA1Q96BD8 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.54□□□□□ -2.5
SKA1Q96BD8 RNY4P6-201ENST00000363667 96 ntBASIC-0.54□□□□□ -2.5
SKA1Q96BD8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
SKA1Q96BD8 MIR106A-201ENST00000384870 81 ntBASIC-0.54□□□□□ -2.5
SKA1Q96BD8 MIR548G-201ENST00000408442 89 ntBASIC-0.54□□□□□ -2.5
SKA1Q96BD8 AC093423.1-201ENST00000440817 142 ntBASIC-0.54□□□□□ -2.5
SKA1Q96BD8 MIR3144-201ENST00000579460 79 ntBASIC-0.54□□□□□ -2.5
SKA1Q96BD8 RNU6-409P-201ENST00000384114 104 ntBASIC-0.55□□□□□ -2.5
SKA1Q96BD8 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.55□□□□□ -2.5
SKA1Q96BD8 AC096531.1-201ENST00000419107 107 ntBASIC-0.55□□□□□ -2.5
SKA1Q96BD8 RNU6-287P-201ENST00000516230 98 ntBASIC-0.55□□□□□ -2.5
SKA1Q96BD8 MIR3666-201ENST00000607845 111 ntBASIC-0.55□□□□□ -2.5
SKA1Q96BD8 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 SNORD114-15-201ENST00000364687 72 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 SNORD49B-201ENST00000365172 72 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 SNORA51.5-201ENST00000384126 131 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 RNU6-804P-201ENST00000384286 107 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 RNU6-735P-201ENST00000410612 107 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 AL670379.3-201ENST00000605040 251 ntBASIC-0.56□□□□□ -2.5
SKA1Q96BD8 SNORD36A-201ENST00000362874 73 ntBASIC-0.57□□□□□ -2.5
SKA1Q96BD8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.57□□□□□ -2.5
SKA1Q96BD8 MIR181B2-201ENST00000385004 89 ntBASIC-0.57□□□□□ -2.5
SKA1Q96BD8 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.57□□□□□ -2.5
SKA1Q96BD8 SNORD114-29-201ENST00000364819 70 ntBASIC-0.58□□□□□ -2.5
SKA1Q96BD8 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.58□□□□□ -2.5
SKA1Q96BD8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.58□□□□□ -2.5
SKA1Q96BD8 MIR4263-201ENST00000584745 83 ntBASIC-0.58□□□□□ -2.5
SKA1Q96BD8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.58□□□□□ -2.5
SKA1Q96BD8 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.59□□□□□ -2.5
SKA1Q96BD8 RNU6-781P-201ENST00000516377 101 ntBASIC-0.59□□□□□ -2.5
SKA1Q96BD8 RNU7-188P-201ENST00000517063 64 ntBASIC-0.59□□□□□ -2.5
SKA1Q96BD8 AL162726.3-218ENST00000636401 95 ntBASIC-0.59□□□□□ -2.5
SKA1Q96BD8 SNORD14C-201ENST00000365382 88 ntBASIC-0.6□□□□□ -2.51
SKA1Q96BD8 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.6□□□□□ -2.51
SKA1Q96BD8 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
SKA1Q96BD8 RNU6-30P-201ENST00000384561 107 ntBASIC-0.61□□□□□ -2.51
SKA1Q96BD8 MIR569-201ENST00000385228 96 ntBASIC-0.61□□□□□ -2.51
SKA1Q96BD8 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms