Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC138869.1-201ENST00000568623 124 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 MIR8053-201ENST00000613344 75 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 MIR8063-201ENST00000621930 81 ntBASIC1.8□□□□□ -2.12
SHKBP1Q8TBC3 SNORD45.1-201ENST00000363181 77 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 MIR125B2-201ENST00000385128 89 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-165P-201ENST00000517170 99 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 MIR502-201ENST00000606349 86 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.79□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-934P-201ENST00000365154 107 ntBASIC1.78□□□□□ -2.12
SHKBP1Q8TBC3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SHKBP1Q8TBC3 SNORD116-24-201ENST00000384549 92 ntBASIC1.78□□□□□ -2.12
SHKBP1Q8TBC3 RNU6-987P-201ENST00000384759 104 ntBASIC1.78□□□□□ -2.12
SHKBP1Q8TBC3 MTND4LP19-201ENST00000403051 166 ntBASIC1.78□□□□□ -2.12
SHKBP1Q8TBC3 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
SHKBP1Q8TBC3 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
SHKBP1Q8TBC3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 RNA5SP245-201ENST00000364239 121 ntBASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 SNORD113.3-201ENST00000364630 78 ntBASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 SNORA67.5-201ENST00000391036 107 ntBASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 RNU4-37P-201ENST00000410214 84 ntBASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 AC036111.3-201ENST00000526389 112 ntBASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SHKBP1Q8TBC3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SHKBP1Q8TBC3 SNORD1A-201ENST00000364968 72 ntBASIC1.76□□□□□ -2.13
SHKBP1Q8TBC3 AP1B1P2-201ENST00000416196 106 ntBASIC1.76□□□□□ -2.13
SHKBP1Q8TBC3 AC019176.1-201ENST00000518519 225 ntBASIC1.76□□□□□ -2.13
SHKBP1Q8TBC3 MIR4771-2-201ENST00000577758 74 ntBASIC1.76□□□□□ -2.13
SHKBP1Q8TBC3 MIR4771-1-201ENST00000582617 74 ntBASIC1.76□□□□□ -2.13
SHKBP1Q8TBC3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
SHKBP1Q8TBC3 SNORD113.1-201ENST00000363280 73 ntBASIC1.75□□□□□ -2.13
SHKBP1Q8TBC3 MIR676-201ENST00000390702 67 ntBASIC1.75□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-604P-201ENST00000390917 100 ntBASIC1.75□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-1177P-201ENST00000391058 104 ntBASIC1.75□□□□□ -2.13
SHKBP1Q8TBC3 AL356379.1-201ENST00000414105 126 ntBASIC1.75□□□□□ -2.13
SHKBP1Q8TBC3 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
SHKBP1Q8TBC3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-1216P-201ENST00000362590 107 ntBASIC1.74□□□□□ -2.13
SHKBP1Q8TBC3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.74□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-499P-201ENST00000365615 107 ntBASIC1.74□□□□□ -2.13
SHKBP1Q8TBC3 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
SHKBP1Q8TBC3 MIR4511-201ENST00000582784 87 ntBASIC1.74□□□□□ -2.13
SHKBP1Q8TBC3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-535P-201ENST00000384722 107 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 MIR17-201ENST00000385012 84 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 U3.27-201ENST00000391237 200 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 AC244505.6-201ENST00000452829 130 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 AC079140.2-201ENST00000506193 142 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-287P-201ENST00000516230 98 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 MIR4773-1-201ENST00000637203 78 ntBASIC1.73□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-382P-201ENST00000365181 106 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 SNORA75.2-201ENST00000391138 150 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 SNORA75.3-201ENST00000391231 150 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 RPS26P5-201ENST00000418544 335 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-274P-201ENST00000459566 107 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 RNU6-752P-201ENST00000516376 102 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 MIR4287-201ENST00000579398 78 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 MIR4676-201ENST00000583078 72 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 AC008608.1-201ENST00000603910 127 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 AC103706.3-201ENST00000636297 85 ntBASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SHKBP1Q8TBC3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 RNU6-321P-201ENST00000410912 106 ntBASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 RNA5SP247-201ENST00000411181 105 ntBASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 AC048334.1-201ENST00000477975 159 ntBASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 RNU7-40P-201ENST00000516397 64 ntBASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 RNU6-1057P-201ENST00000517162 102 ntBASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 MIR4781-201ENST00000585250 76 ntBASIC1.71□□□□□ -2.14
SHKBP1Q8TBC3 SNORD33-201ENST00000362761 85 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 AC244098.3-201ENST00000424803 96 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 RNU7-95P-201ENST00000459222 64 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 AL512310.8-201ENST00000550183 120 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 MIR3937-201ENST00000580135 106 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 AC106800.4-201ENST00000614905 153 ntBASIC1.7□□□□□ -2.14
SHKBP1Q8TBC3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
SHKBP1Q8TBC3 SNORD115-44-201ENST00000365391 82 ntBASIC1.69□□□□□ -2.14
SHKBP1Q8TBC3 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
SHKBP1Q8TBC3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SHKBP1Q8TBC3 SNORD111-201ENST00000408139 94 ntBASIC1.69□□□□□ -2.14
SHKBP1Q8TBC3 AL359821.1-201ENST00000605519 182 ntBASIC1.69□□□□□ -2.14
SHKBP1Q8TBC3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 RNU6-369P-201ENST00000362515 102 ntBASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 RNU6-669P-201ENST00000365575 107 ntBASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 RNU6-364P-201ENST00000384387 107 ntBASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 MIR938-201ENST00000401216 83 ntBASIC1.68□□□□□ -2.14
SHKBP1Q8TBC3 AC110620.1-201ENST00000416042 228 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms